ID   AJ781402; SV 1; linear; genomic RNA; STD; VRL; 1841 BP.
XX
AC   AJ781402;
XX
DT   10-SEP-2004 (Rel. 81, Created)
DT   20-OCT-2004 (Rel. 81, Last updated, Version 2)
XX
DE   Cherry chlorotic rusty spot associated partitivirus CP gene for putative
DE   coat protein, segment 2, genomic RNA
XX
KW   coat protein; CP gene.
XX
OS   Cherry chlorotic rusty spot associated partitivirus
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1841
RA   Flores R.;
RT   ;
RL   Submitted (01-JUL-2004) to the INSDC.
RL   Flores R., Inst. Biologia. Mol. y Cel. de Plantas, Csic, Avenida de los
RL   Naranjos, s/n, 46022 Valencia, SPAIN.
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80182-0.
RX   PUBMED; 15483257.
RA   Coutts R.H.A., Covelli L., Di Serio F., Citir A., Acikgoz S., Hernandez C.,
RA   Ragozzino A., Flores R.;
RT   "Cherry chlorotic rusty spot and Amasya cherry diseases are associated with
RT   a complex pattern of mycoviral-like double-stranded RNAs. II.
RT   Characterization of a new species in the genus Partitivirus";
RL   J. Gen. Virol. 85(Pt 11):3399-3403(2004).
XX
DR   MD5; 042e72f28ad9978646dd9c879ef066e9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1841
FT                   /organism="Cherry chlorotic rusty spot associated
FT                   partitivirus"
FT                   /segment="2"
FT                   /host="putative fungus"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy:Campania"
FT                   /isolation_source="dsRNA is found in symptomatic sweet and
FT                   sour cherry leaves affected by cherry chlorotic rusty spot
FT                   disease"
FT                   /db_xref="taxon:284688"
FT   CDS             121..1635
FT                   /gene="CP"
FT                   /product="putative coat protein"
FT                   /function="encapsidation"
FT                   /db_xref="GOA:Q65A69"
FT                   /db_xref="UniProtKB/TrEMBL:Q65A69"
FT                   /protein_id="CAH03669.1"
FT                   /translation="MSAPATTGSTTSTASVPATEQTAPASVAVPPTAPATDVKYVAPAK
FT                   KQKSFAPREPTATSGGPKNPGLSMMLSGVSDLPFFGIKHNDVSYVVPDTTQLFYVLSIM
FT                   DTQMARTKRFTDANPDWHPFVSQLYIAVLFYYQVLKNQTHGGMISNDQRLFVDFLDTQF
FT                   KAEHLKIPGPIAIFFQSLAANAGPNENFGNLVFGIPNAHDISCTSYLWQDKVHTILPNV
FT                   IFILDQFMRLISLISPVNSGPVQANASHTDTVYTTIFGAPASKDEATRFAMLTPSARSD
FT                   FQTTVGLLNGLSTSSNVWRNTLPFANDGDSQYVITEDDELLDLDQVFGFRGIGPYADRP
FT                   YGWFAQVIRVMQPYSDFFKDTVSLGSVTTTGTGISYIRTKYVDTKQNKNILVHAVTTRK
FT                   VRYQTGSTLRYHIPEFTGITTIHLHAEEFLDLVTEQAGILTQLNSDWTDINKDVTDTSG
FT                   PDYTSTHVGPIFSIPDSGRTSQYKVSNTIAPLISGYYHTPSALRFE"
XX
SQ   Sequence 1841 BP; 446 A; 619 C; 330 G; 446 T; 0 other;
     gaattatctg aggaacgtaa atctaaaagt ctgacacctc caacttcaaa gttcattcca        60
     cgctctccca acaggtatta cctcccccca catcccacac atttacacta ctacgtcaaa       120
     atgtctgcac ccgcgaccac cggctccacg acgagcaccg cctctgtccc tgcaactgag       180
     caaacagccc ctgcctccgt cgccgttccc ccgaccgcac ccgccaccga cgtcaaatac       240
     gtcgctcctg ccaagaagca gaagagcttc gctccccgcg agcccactgc aacttccggt       300
     ggccccaaga acccgggtct ttcaatgatg ctttccggcg tatccgacct ccccttcttt       360
     ggaatcaagc acaacgatgt ttcttatgtc gtgcctgaca ccacccagct tttctacgtc       420
     ctatccatca tggacacgca gatggccaga accaagcgtt tcaccgacgc caaccctgac       480
     tggcaccctt tcgtctccca gctatacatc gctgtgttgt tctactacca ggttctcaag       540
     aaccaaactc acggtggtat gatcagcaac gatcaacgtc tgtttgtcga tttcctcgac       600
     actcagttca aggcagaaca cctgaagatt cctggcccta tcgccatttt cttccagtcc       660
     ctcgccgcca acgctggccc caacgaaaac tttggcaatc ttgtctttgg cattcccaat       720
     gcccatgaca tcagctgcac cagttatctc tggcaagaca aagttcacac cattcttccg       780
     aacgtgatct tcattcttga tcagttcatg cgattgatct ctctgatctc gcctgttaat       840
     tctggcccag tccaagccaa tgcatcccac acggataccg tctatacgac gatcttcggc       900
     gcccccgcct ccaaggacga agccacccgc ttcgctatgc tcacgcctag cgctcgctcg       960
     gacttccaga ccacagttgg tctcctcaat ggcctcagca cctcatccaa cgtgtggcgc      1020
     aacaccctcc ccttcgccaa tgacggtgac agtcaatatg tcatcaccga agacgacgaa      1080
     ctcctcgacc tcgaccaggt ctttggattt cgcggcatcg gcccttacgc tgaccgacct      1140
     tatggttggt tcgctcaagt catccgcgtc atgcagcctt acagtgattt cttcaaggac      1200
     actgtttccc ttggctccgt gaccaccact ggcaccggga tctcctacat acgtacaaag      1260
     tacgtggaca ccaagcaaaa caagaacatt cttgttcacg ctgtcaccac gcgcaaagtc      1320
     cgttaccaaa ccggttctac actccggtac catattccag agtttactgg aattaccacg      1380
     atccacctcc acgctgagga gtttctcgac cttgtcactg aacaggccgg catcctcacc      1440
     cagctcaact ccgattggac tgacatcaac aaagatgtca ccgacacttc tggccctgac      1500
     tacacgtcaa cccacgtcgg accaatcttc agtattcctg atagtggtcg aacttcacaa      1560
     tacaaggtca gcaacaccat tgccccgttg atttccggat actaccacac cccctccgca      1620
     ctcagatttg aatagagaag cgtaaattct cgcgacaccc ccgagttttt ctctctttct      1680
     gtttttcaat ttcttttaac tgaacgacct tcccttgttg tttgcttttt ttataacctt      1740
     taagcccctc tcaaccgttt ctgtcgcaat gcgtccaaca cgcaatgaaa caatctaatg      1800
     gtctcaacag accacaaaaa aaaaaaaaaa aaattttaac c                          1841
//