ID   AJ781401; SV 1; linear; genomic RNA; STD; VRL; 2021 BP.
XX
AC   AJ781401;
XX
DT   10-SEP-2004 (Rel. 81, Created)
DT   20-OCT-2004 (Rel. 81, Last updated, Version 2)
XX
DE   Cherry chlorotic rusty spot associated partitivirus RdRp gene for
DE   RNA-dependent RNA polymerase, segment 1, genomic RNA
XX
KW   RdRp gene; RNA-dependent RNA polymerase.
XX
OS   Cherry chlorotic rusty spot associated partitivirus
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-2021
RA   Flores R.;
RT   ;
RL   Submitted (30-JUN-2004) to the INSDC.
RL   Flores R., Inst. Biologia. Mol. y Cel. de Plantas, Csic, Avenida de los
RL   Naranjos, s/n, 46022 Valencia, SPAIN.
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80182-0.
RX   PUBMED; 15483257.
RA   Coutts R.H.A., Covelli L., Di Serio F., Citir A., Acikgoz S., Hernandez C.,
RA   Ragozzino A., Flores R.;
RT   "Cherry chlorotic rusty spot and Amasya cherry diseases are associated with
RT   a complex pattern of mycoviral-like double-stranded RNAs. II.
RT   Characterization of a new species in the genus Partitivirus";
RL   J. Gen. Virol. 85(Pt 11):3399-3403(2004).
XX
DR   MD5; a3a7f1c9348761ee17f4ee97b453e809.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2021
FT                   /organism="Cherry chlorotic rusty spot associated
FT                   partitivirus"
FT                   /segment="1"
FT                   /host="putative fungus"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy:Campania"
FT                   /isolation_source="dsRNA is found in symptomatic sweet and
FT                   sour cherry leaves affected by cherry chlorotic rusty spot
FT                   disease"
FT                   /db_xref="taxon:284688"
FT   CDS             90..1955
FT                   /gene="RdRp"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /function="transcription and replication of viral dsRNA"
FT                   /db_xref="GOA:Q65A70"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:Q65A70"
FT                   /protein_id="CAH03668.1"
FT                   /translation="MDHLTSLFELFAITPKTQNNLQFVGIYHRPPHSVRANLRNVEKHK
FT                   ITVAHAMHKYLYPHEIDFVINQMRRSNVTEDAILADFFDNNVEPLEPVLDEHFERGLSA
FT                   MLDAFRPPQKCLPAHIYDVQHHYPYKWQVNAEAPFSTDSYFLANRPTFRAVFERLESLY
FT                   THLATDWHRRYGNKTDNDDFMNDHVPAKFGPMKETVFSWTHRWHHVIKSNFTDTAGLSK
FT                   DYYFKNRYIFPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPG
FT                   ATPMLWSYETFTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIFDGVETFL
FT                   DFDNGYLPTKDYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIP
FT                   SGLFITQLIDSWYNYTMLATILSAMGFDPRSCIIKVQGDDSIIRLSALIPPDAHDSFLT
FT                   KVQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNP
FT                   SPEITMAQSIGFAYASFGNHERVRLVLHDIYEYYKHQGYTPNRAGLSLVFGNSPDLMIP
FT                   HYTLDHFPTLREIKMFLTNANYANEETNSRTWPLNHFLSLPCHRT"
XX
SQ   Sequence 2021 BP; 610 A; 592 C; 340 G; 479 T; 0 other;
     gaattatctg agaaacaaag ctccacaatt ctctgcctcc aacaataaag cagatttctt        60
     tgctcttcta acagctatta cttaccacaa tggaccacct cacttccctt ttcgagcttt       120
     ttgctatcac accgaaaaca caaaacaatc tacagtttgt tgggatctac cacagacctc       180
     cacactccgt tcgagcaaac ctccgcaatg ttgaaaaaca caaaatcaca gtcgctcacg       240
     ccatgcacaa gtacctttac ccgcatgaaa tcgactttgt tatcaaccaa atgcgacgct       300
     caaacgtcac tgaagatgcc atacttgctg actttttcga caacaacgtc gaaccacttg       360
     aacctgttct tgacgaacac ttcgaacgtg gactctccgc aatgctggat gcttttcgcc       420
     ctccgcagaa atgcctgcct gcccacatct atgatgtgca gcaccactac ccatacaaat       480
     ggcaagtgaa cgctgaagcc cccttctcca ccgattccta tttcttagcg aatcgaccaa       540
     ccttccgcgc agtgtttgaa cgactcgaat cgctctacac acacctcgca accgattggc       600
     accgccgata cggaaacaaa accgacaatg atgattttat gaatgatcat gtccctgcga       660
     aatttggccc tatgaaagaa acagtcttct catggactca ccgatggcac cacgtcatca       720
     aatccaactt caccgacaca gctggattgt ctaaagacta ttacttcaaa aaccgataca       780
     tcttcccaat gcttcttcac acgaagacag caattgtcaa gaaagacgac ccgaataaga       840
     tgcgaaccat ctggggctgt tcaaagcctt ggatcatcgc agacaccatg ctatggtggg       900
     aatacgtcgc gtacgctaag ttacaacctg gagccacacc aatgctctgg agttacgaaa       960
     ccttcacagg tggctggctt agactcaacc acgcactttt ctcttcatac atacggcact      1020
     cgtacatcac actcgactgg aaacgcttcg ataagaaagc gtatttctgc atcatcgaca      1080
     aaattttcga tggcgttgaa acattcctcg actttgacaa cggctacttg cctacgaaag      1140
     attatcccga taccaaatcg acctggacac aaggacgttc cacccgcatc aaacgcctgt      1200
     ttgactggac aaaagagaac ttctaccatg caccaatcgt cctacctaat ggacacatgt      1260
     acgtccgaca attcgctgga ataccatccg gcctattcat cactcaactg atcgattcct      1320
     ggtacaacta caccatgctc gcaaccatcc tatccgcgat gggcttcgac cctcggtcct      1380
     gtattattaa agtccaaggt gatgattcaa tcatccgcct cagtgcactc atccctccgg      1440
     atgctcacga ttctttttta actaaggtcc aagaactcgc cgactactac ttccaatcag      1500
     tagtctccgt gaacaagtct gaagtacgta acgagctcaa cggatgcgaa gttttatcgt      1560
     accgacacag acacggttta ccataccgcg acgaactagc catgctagct caactgtatc      1620
     acacgaaagc acgcaaccca agtcccgaaa tcacaatggc acaatccatc ggcttcgcct      1680
     atgcatcgtt cggaaatcat gaaagagtac gtctcgtact acatgatatc tatgaatatt      1740
     acaagcatca aggctacaca cccaaccgag ccggactcag cctcgtcttc ggaaactctc      1800
     ccgacctcat gatcccgcac tacacacttg atcactttcc cactctcagg gaaataaaaa      1860
     tgttcctgac taatgcaaat tatgccaatg aagaaaccaa ctcacgaacg tggcctctca      1920
     accactttct ctctcttcct tgtcatcgca cttagtactt tgagcaattg caattataca      1980
     aaattccaaa aaaaaaaaaa atccaaaaaa aaaaaaaaaa g                          2021
//