ID AJ781397; SV 1; linear; genomic RNA; STD; VRL; 3399 BP. XX AC AJ781397; XX DT 10-SEP-2004 (Rel. 81, Created) DT 20-OCT-2004 (Rel. 81, Last updated, Version 2) XX DE Cherry chlorotic rusty spot associated chrysovirus RdRp gene for DE RNA-dependent RNA polymerase, segment 1, genomic RNA XX KW RdRp gene; RNA-dependent RNA polymerase. XX OS Amasya cherry disease associated chrysovirus OC Viruses; Riboviria; Chrysoviridae; Alphachrysovirus. XX RN [1] RP 1-3399 RA Flores R.; RT ; RL Submitted (30-JUN-2004) to the INSDC. RL Flores R., Inst. Biologia. Mol. y Cel. de Plantas, Csic, Avenida de los RL Naranjos, s/n, 46022 Valencia, SPAIN. XX RN [2] RX DOI; 10.1099/vir.0.80181-0. RX PUBMED; 15483256. RA Covelli L., Coutts R.H.A., Di Serio F., Citir A., Acikgoz S., Hernandez C., RA Ragozzino A., Flores R.; RT "Cherry chlorotic rusty spot and Amasya cherry diseases are associated with RT a complex pattern of mycoviral-like double-stranded RNAs. I. RT Characterization of a new species in the genus Chrysovirus"; RL J. Gen. Virol. 85(Pt 11):3389-3397(2004). XX DR MD5; d5e35f1de0ee3402d98cd8e36cbaaef1. DR EuropePMC; PMC3393542; 22496220. XX FH Key Location/Qualifiers FH FT source 1..3399 FT /organism="Amasya cherry disease associated chrysovirus" FT /segment="1" FT /host="putative fungus" FT /mol_type="genomic RNA" FT /country="Italy:Campania" FT /isolation_source="dsRNA is found in symptomatic sweet and FT sour cherry leaves affected by cherry chlorotic rusty spot FT disease" FT /db_xref="taxon:284687" FT CDS 87..3350 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /function="transcription and replication of viral dsRNA" FT /db_xref="GOA:Q65A74" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q65A74" FT /protein_id="CAH03664.1" FT /translation="MTGGHKHKTPGTSQTDKKFAKKLAASMDSLKAGFATNKSVADYTM FT KLQSSMSRYEENRISNLFAIVMPGGTGKTRWAREYGLVDVDELVSPDEHENLYAVRKAV FT LMQKGDWVVHNSEWANRVRFTLMKLDYNRPVVLLCHTEEFAYEVGALPILAITMDEGVW FT RKNIENRGYLGKMFSELSYESVRTHTKVQMFKANSNEQVERAILRVMSLVGIPSAAPLK FT YDADNPTPGYSAGLPDWVMKGEKDKCHLELLMDMYDQDCVPKECMDYFCRNETIPASYG FT FGITMNDWARVFGTITYYMRDVKNEIPEGDPEDIWPYSSDREKTRLNVNMKRLLTSTNL FT MDIEGAKTLAATHVGATNGFVSTLVSFWTGIQELYKDEVDLMPLCLVGQANWVYCQKMV FT HDLMRQSRHYMNTEVEQQTKQSIMYMDQLVGRRLFKPDWQKEVDDRQGNHGFAQHMAYD FT PNTGTWEVEQYRKDFNHALNDAFARVKSTPRVLNIKDYADFFSKRGEWLTKGSTVYNEI FT PKEHRQTVVSIVDEIGDIVRSVDVRHNKKSLFEMSNVFHLLGDKFELRNITKAVPKLNE FT CGYKDRTLLPGSLFHYLMFSYVLEFVEKQAQIGSVRVNAPSDNDIRYMDKKMTQGVYHM FT MFDWANFNAFHSAEEMSLVIEKLAYVVPAPPDYDMFVKGVAASMWDMILMDPDGDVHKI FT ETGLYSGWRGTSFLNSVLNSCYTTCARMSYERIHKYDPFVYIDHGGDDIDGGIRNMGDG FT VKMLVVMEKMQFEAQKIKQMIGIDSEFFRITFTASGAYGSATRALARFVSGNWEGSGII FT PLRERISGLMDQMAKICRRGFHQEVGHTLLSLAIAHWGRVKPDKDWLALPAVAIHGCEE FT QGGLGVPDKDGCVWWLDKEIRGKVSDRKVLPPGKLVAEETIRNLAAELNRLNIDAVHTG FT PVATKLAAMSFDERGEETFETLEKADAEVVKKVSVIVPKVDEHEFEKMMAYVETNRSVK FT KDLARLERYRMLEGHLQTNGVTITSEDLAKMLEINLPEGALQFKPSKYYRRLVGDEWAA FT VIEEYSLACMQYAGYDKDKAEDVFETLTYMVSVVFKHHV" XX SQ Sequence 3399 BP; 1084 A; 559 C; 943 G; 813 T; 0 other; gaaaattatg gtttttgtat tcacctttaa aaatacaaca aaacgaatca aaacaaaaca 60 aaacaaaaca aacaaagaat tccaaaatga caggaggaca caaacacaag acgcctggca 120 cgtcccagac ggacaagaag tttgctaaga aattggctgc ttcaatggac agtttgaagg 180 ctggattcgc aacaaataaa agtgttgctg attatacgat gaagttgcaa tcatcgatgt 240 caagatacga ggagaatagg atttcaaacc tgttcgcaat tgtgatgcct ggtggtacag 300 gtaaaaccag gtgggcgaga gagtatggat tggtagacgt cgatgagcta gtttcacctg 360 atgagcatga gaatctgtac gcagtgagga aagctgtgct gatgcagaaa ggggactggg 420 tggtccacaa ttccgagtgg gctaacaggg tcagattcac tttgatgaag ctagattaca 480 acagacctgt agtattgctt tgtcacacag aggaatttgc ttacgaggta ggagcgctac 540 ctatactggc aatcactatg gacgaggggg tctggaggaa gaacattgag aacagaggat 600 acctgggaaa aatgttctcc gagctaagtt atgagagcgt gaggacacat actaaagtgc 660 agatgttcaa ggcaaatagc aatgaacagg tggaacgggc gatattaaga gtgatgtcat 720 tggtaggtat accaagcgca gcgccactca aatatgatgc tgacaaccct acacccggat 780 actcggctgg actgccagat tgggtgatga agggtgagaa agacaaatgc catttggaac 840 tgcttatgga catgtatgac caagattgtg tacccaaaga gtgtatggac tacttctgca 900 ggaacgagac tatacctgca tcgtacgggt ttggtattac aatgaatgat tgggcgcgtg 960 tgttcgggac aataacttat tacatgcgtg atgttaaaaa tgagataccc gaaggagacc 1020 cagaggatat atggccgtac tcatctgaca gagaaaagac aagattgaac gttaacatga 1080 aaagacttct gacgtccact aatttgatgg atatagaagg agcgaaaacg ttggctgcta 1140 cacatgttgg ggcgacgaat ggattcgttt ctacactggt atcattctgg actggaatac 1200 aggagttgta caaagatgag gttgatctga tgccactctg tttggttgga caagcaaact 1260 gggtgtactg ccagaagatg gtgcatgatc tgatgagaca gagcaggcac tatatgaata 1320 ctgaggtgga acaacagact aagcaaagta taatgtatat ggaccagctt gttgggcgga 1380 ggcttttcaa gccggactgg cagaaagagg ttgatgaccg gcaaggtaat catggtttcg 1440 cgcaacacat ggcgtacgat ccgaacactg ggacttggga ggtcgaacaa tacaggaagg 1500 acttcaacca cgcgcttaat gatgcatttg caagggttaa atcaacaccg cgtgtgctta 1560 acattaaaga ttacgctgac ttcttcagca agagaggtga gtggctaacg aaaggtagta 1620 cagtgtacaa tgagatacct aaggagcaca gacaaacagt ggttagtata gtggatgaaa 1680 taggtgacat agttaggagt gttgatgtta gacacaacaa gaagagcttg tttgaaatgt 1740 cgaacgtatt tcacttgctt ggagacaaat ttgagctcag gaatataacg aaagcagttc 1800 cgaagttgaa cgagtgtggt tacaaggaca ggacactgtt accgggatca cttttccatt 1860 atctaatgtt ctcatatgtc cttgagttcg ttgagaagca agctcaaata ggtagcgtaa 1920 gagtgaacgc accatcagac aatgacatca gatacatgga caagaagatg acacaaggcg 1980 tatatcatat gatgtttgac tgggctaatt ttaatgcttt ccactcagcg gaggagatgt 2040 ccttagtgat cgagaaatta gcgtacgtgg taccagcacc gccagattat gacatgttcg 2100 ttaaaggtgt ggcagcaagt atgtgggaca tgattttgat ggatccggat ggtgatgtac 2160 acaagataga gacaggtctg tactcagggt ggagaggtac atcattccta aactcggtgt 2220 taaattcatg ttacaccaca tgtgctagaa tgtcatacga aaggatacac aaatatgatc 2280 cgttcgtgta tatcgatcac ggtggtgatg atatagatgg aggaattagg aacatgggtg 2340 atggtgtgaa gatgcttgtg gtaatggaga agatgcaatt cgaggctcag aagatcaaac 2400 aaatgattgg aatagattca gagttcttca ggattacgtt cacagcaagt ggtgcttatg 2460 gtagtgcaac aagagcacta gcaaggtttg tctcaggtaa ttgggaaggt agtggtatta 2520 taccattgcg tgagagaata tctgggctga tggatcagat ggcaaagata tgtaggcgtg 2580 ggtttcacca ggaggttggg cacacgttat tgtcgctggc tatagctcat tggggcagag 2640 tcaaaccgga caaagactgg ttggcactac ctgcagtggc gatacacggt tgtgaagaac 2700 aaggaggact tggcgtgcca gacaaggatg gttgtgtctg gtggcttgac aaagagataa 2760 ggggtaaagt gagcgatagg aaagtgctac caccggggaa actagtggca gaagaaacga 2820 ttaggaatct ggccgctgag ctgaacaggc ttaacattga tgctgtacac acggggccag 2880 tggcgacaaa gttggctgcg atgtcattcg atgagagagg agaagaaaca tttgaaacat 2940 tggagaaagc tgacgctgaa gtggttaaga aagttagtgt catagtaccc aaagtggacg 3000 aacatgagtt tgaaaagatg atggcgtacg tagagactaa taggtcagtt aagaaagatc 3060 tggcgagatt ggaaaggtat aggatgctgg aagggcacct acagacgaat ggtgttacta 3120 ttacatcaga agacttggca aaaatgcttg agataaacct accggaagga gcattacagt 3180 ttaaaccaag caagtattac aggaggttag tcggtgatga gtgggcagca gtgatagaag 3240 agtactcgct tgcgtgtatg cagtatgctg ggtacgataa agataaggca gaggatgtgt 3300 ttgagacgct aacttacatg gtgagtgtgg ttttcaaaca tcatgtgtaa actgcaatat 3360 taaataaaga agaaaatttg acgattgtca ataatatgc 3399 //