ID   AJ781168; SV 1; linear; genomic RNA; STD; VRL; 2002 BP.
XX
AC   AJ781168;
XX
DT   10-SEP-2004 (Rel. 81, Created)
DT   20-OCT-2004 (Rel. 81, Last updated, Version 2)
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DE   Amasya cherry disease associated partitivirus RdRp gene for RNA-dependent
DE   RNA polymerase, genomic RNA
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KW   RdRp gene; RNA-dependent RNA polymerase.
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OS   Amasya cherry disease-associated mycovirus
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-2002
RA   Coutts R.H.A.;
RT   ;
RL   Submitted (01-JUL-2004) to the INSDC.
RL   Coutts R.H.A., Department of Biological Sciences, Imperial College London,
RL   Sir Alexander Fleming Building, Imperial College Road, SW7 2AZ, UNITED
RL   KINGDOM.
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80182-0.
RX   PUBMED; 15483257.
RA   Coutts R.H.A., Covelli L., Di Serio F., Citir A., Acikgoz S., Hernandez C.,
RA   Ragozzino A., Flores R.;
RT   "Cherry chlorotic rusty spot and Amasya cherry diseases are associated with
RT   a complex pattern of mycoviral-like double-stranded RNAs. II.
RT   Characterization of a new species in the genus Partitivirus";
RL   J. Gen. Virol. 85(Pt 11):3399-3403(2004).
XX
DR   MD5; accd7f85a1bbe44920be25fd684b7052.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2002
FT                   /organism="Amasya cherry disease-associated mycovirus"
FT                   /host="putative fungus"
FT                   /mol_type="genomic RNA"
FT                   /country="Turkey"
FT                   /isolation_source="found in symptomatic sweet and sour
FT                   cherry trees affected by Amasya cherry disease"
FT                   /db_xref="taxon:284689"
FT   CDS             90..1955
FT                   /gene="RdRp"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /function="polymerase"
FT                   /db_xref="GOA:Q65A75"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:Q65A75"
FT                   /protein_id="CAG77604.1"
FT                   /translation="MDHLTSLFELFAITPKTQNNLQFVGIYHRPPHSVRANLRNVEKHK
FT                   ITVAHAMHKYLYPHEIDFVINQMRRSDVTEDAILADFFDNNVEPLEPVLDEHFERGLSA
FT                   MLDAFRPPQKCLPAHIYDVQHHYPYKWQVNAEAPFSTDSYFLANRPTFRAVFERLESLY
FT                   THLATDWHRRYGNKTDNDDFMNDHVPAKFGPMKETVFSWTHRWHHVIKSNFTDTAGLSK
FT                   DYYFKNRYIFPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPG
FT                   ATPMLWSYETFTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIFDGVETFL
FT                   DFDNGYLPTKDYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIP
FT                   SGLFITQLIDSWYNYTMLATILSAMGFDPRSCIIKVQGDDSIIRLSALIPPDAHDSFLT
FT                   KVQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNP
FT                   SPEITMAQSIGFAYASFGNHERVRLVLHDIHEYYKLQGYTPNRAGLSLVFGNSPDLMIP
FT                   HYTLDHFPSLREIKMFLTNAEYVNEETNSRTWPLNHFLHLPCHRT"
XX
SQ   Sequence 2002 BP; 596 A; 585 C; 342 G; 479 T; 0 other;
     gaattatctg agaaacaaag tctcacaacc ctctgcctcc aacaataaag cagatttctt        60
     tgctcttcta acagctatta cttgccacaa tggaccacct cacttccctt ttcgagcttt       120
     ttgctatcac accgaaaaca caaaacaatc tacagtttgt tgggatctac cacagacctc       180
     cacactccgt tcgagcaaac ctccgcaacg ttgagaaaca caaaatcaca gtcgctcacg       240
     ccatgcacaa gtacctttac ccgcatgaaa tcgacttcgt tatcaaccaa atgcgacgct       300
     cagacgtcac tgaagatgcc atacttgctg actttttcga caacaacgtc gaaccacttg       360
     aacctgttct tgacgaacac ttcgaacgtg gactctccgc aatgctggat gcttttcgcc       420
     ctccgcagaa atgcctgcct gcccacatct atgatgtgca gcaccactac ccatacaaat       480
     ggcaagtgaa cgctgaagcc cccttctcca ccgattccta tttcttagcg aatcgaccaa       540
     ccttccgcgc agtgtttgaa cgactcgaat cgctctacac acacctcgca accgattggc       600
     accgccggta cggaaacaaa accgacaatg atgattttat gaatgatcat gtccctgcga       660
     aatttggccc tatgaaagaa acagtcttct catggactca ccgatggcac cacgtcatca       720
     aatccaactt caccgacaca gctggattgt ctaaagacta ttacttcaaa aaccgataca       780
     tcttcccaat gctacttcac acgaagacag caattgtcaa gaaagacgac ccgaataaga       840
     tgcgaaccat ctggggctgt tcaaagcctt ggatcatcgc agacaccatg ctatggtggg       900
     aatacgtcgc gtacgctaag ttacaacctg gagccacacc aatgctctgg agttacgaaa       960
     ccttcacagg tggctggctt agactcaacc acgcactttt ctcttcatac atacggcact      1020
     cgtacatcac actcgactgg aaacgcttcg ataagaaagc gtatttctgc atcatcgaca      1080
     aaattttcga tggcgttgaa acattcctcg actttgacaa cggctatttg cctacgaaag      1140
     attatcccga taccaaatcg acttggacac aagaacgttc cacccgcctc aaacgcctgt      1200
     ttgactggac aaaagagaac ttctaccatg caccaatcgt cctacccaat ggacacatgt      1260
     acgtccgaaa attcgctgga ataccatctg gcttattcat cactcaactg atcgattcct      1320
     ggtacaacta caccatgctc gcaaccatcc tatccgcgat gggcttcgac cctcggtcct      1380
     gtattattaa agtccaaggt gatgattcaa tcatccgcct cagtgcactc atccctccgg      1440
     atgctcacga ttctttttta actaaggtcc aagaactcgc cgactactac tttcaatcag      1500
     tagtctccgt gaacaagtct gaagtacgta acgagctcaa cggatgcgaa gttttatcgt      1560
     accgacacag acacggttta ccataccgcg acgaactagc catgctagct caactgtatc      1620
     acacgaaagc acgcaaccca agtcccgaaa tcacaatggc acaatccatc ggcttcgcct      1680
     acgcttcctt cggaaatcat gaaagagtac gtctcgtact acatgatatc cacgaatatt      1740
     acaagcttca aggctacaca cccaaccgag ccggactcag cctagtcttc ggaaactctc      1800
     ccgacctcat gatcccgcac tacacacttg atcactttcc ctcacttagg gaaataaaaa      1860
     tgttcctgac taatgcagaa tatgtcaatg aagaaaccaa ttcacgaacg tggcctttaa      1920
     accactttct ccatcttcct tgtcatcgca cttagtattt gagcaattgc aattataaca      1980
     aaattacaaa aaaaaaaaaa aa                                               2002
//