ID AJ781166; SV 1; linear; genomic RNA; STD; VRL; 3399 BP. XX AC AJ781166; XX DT 10-SEP-2004 (Rel. 81, Created) DT 20-OCT-2004 (Rel. 81, Last updated, Version 2) XX DE Amasya cherry disease associated chrysovirus RdRp gene for putative DE RNA-dependent RNA polymerase, genomic RNA XX KW RdRp gene; RNA-dependent RNA polymerase. XX OS Amasya cherry disease associated chrysovirus OC Viruses; Riboviria; Chrysoviridae; Alphachrysovirus. XX RN [1] RP 1-3399 RA Coutts R.H.A.; RT ; RL Submitted (01-JUL-2004) to the INSDC. RL Coutts R.H.A., Department of Biological Sciences, Imperial College London, RL Sir Alexander Fleming Building, Imperial College Road, SW7 2AZ, UNITED RL KINGDOM. XX RN [2] RX DOI; 10.1099/vir.0.80181-0. RX PUBMED; 15483256. RA Covelli L., Coutts R.H.A., Di Serio F., Citir A., Acikgoz S., Hernandez C., RA Ragozzino A., Flores R.; RT "Cherry chlorotic rusty spot and Amasya cherry diseases are associated with RT a complex pattern of mycoviral-like double-stranded RNAs. I. RT Characterization of a new species in the genus Chrysovirus"; RL J. Gen. Virol. 85(Pt 11):3389-3397(2004). XX DR MD5; 956b1a06c331c814c0ca183a4dfe520a. XX FH Key Location/Qualifiers FH FT source 1..3399 FT /organism="Amasya cherry disease associated chrysovirus" FT /host="putative fungus" FT /mol_type="genomic RNA" FT /country="Turkey" FT /isolation_source="found in symptomatic sweet and sour FT cherry trees affected by Amasya cherry disease" FT /db_xref="taxon:284687" FT CDS 87..3350 FT /gene="RdRp" FT /product="putative RNA-dependent RNA polymerase" FT /function="polymerase" FT /db_xref="GOA:Q65A77" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q65A77" FT /protein_id="CAG77602.1" FT /translation="MTGGHKHKTPGTSQTDKKFAKKLAASMDNLKAGFATNKSVADYTM FT KLQSSMSRYEENRISNLFAIVMPGGTGKTRWAREYGLVDVDELVSPDEHENLYAVRKAV FT LMQKGDWVVHNSEWANRVRFTLMKLDYNRPVVLLCHTEEFAYEVGALPILAITMDEGVW FT RKNIENRGYLGKMFSELSYESVRTHTKVQMFKANSNEQVERAILRVMSLVGIPSAAPLK FT YDADNPTPGYSAGLPDWVMKGEKDKCHLELLMDMYDQDCVPKECMDYFCRNETIPASYG FT FGITMNDWARVFGTITYYMRDIKHEIPEGDPEDIWPYSSDREKTRLNVNMKRLLTSTNL FT MDIEGAKTLAATHVGATNGFVSTLVSFWTGIQELYKDEVDLMPLCLVGQANWVYCQKMV FT HDLMRQSRHYMNTEVEQQTKQSIMYMDQLVGRRLFKPDWQKEVDDRQGNHGFAQHMAYD FT PNTGTWEVEQYRKDFNHALNDAFARVKSAPRALNIKDYADFFSKRGEWLTKGSTVYNEI FT PKEHRQTVVSIVDETGDLIRSVDVRHNKKSLFEMSNVFHLLGDKFELRNITKAVPKLNE FT CGYKDRTLLPGSLFHYLMFSYVLEFVEKQAQIGSVRVNAPSDNDIRYMDKKMTQGVYHM FT MFDWANFNAFHSAEEMSLVIEKLAYVVPAPPDYDMFVKGVAASMWDMILMDPDGEVHKI FT ETGLYSGWRGTSFLNSVLNSCYTTCARMSYERIHKYDPFVYIDHGGDDIDGGIRNMGDG FT VKMPVVMEKMQFEAQKIKQMIGIDSEFFRITFTASGAYGSATRALARFVSGNWEGSGVI FT PLRERISGLMDQMAKICRRGFHQEVGHTLLSLAIAHWGRVKPDKDWLALPAVAIHGCEE FT QGGLGVPDKDGCVWWLDKEIRGKVSDRKVLPPGKLVAEETIRNLAAELNRLNIDAVHTG FT PVATKLAAMSFDERGEETFETLEKADAEVVKKVSVIVPKVDEHEFEKMMAYVETNRSVK FT KDLARLERYRMLEGHLQTNGVTITSEDLAKMLQINLPEGALLFNPSKYYRRLVGEEWAK FT VIEEYWLACMQYAGYDKDKAEDVFETLTYMVSVVFKHHV" XX SQ Sequence 3399 BP; 1084 A; 576 C; 943 G; 796 T; 0 other; gaaaattatg gtttttgtat tcacctttaa aaatacaaca aaacaaatca aagcgaaaca 60 aaacaaaaaa aaaaacaaaa atcaaaatga caggaggaca caaacacaag acgcctggca 120 cgtcccaaac ggacaagaag tttgccaaga agttggctgc ttcaatggac aatttgaagg 180 ctggattcgc aacaaataaa agtgttgctg attatacgat gaagttgcaa tcatcgatgt 240 caaggtacga ggagaatagg atttcaaacc tgttcgccat tgtgatgcct ggtggtaccg 300 gtaaaaccag gtgggcaaga gagtacggat tggtagacgt cgatgaacta gtttcacctg 360 atgagcatga gaatctgtac gcagtgagga aggctgtgct gatgcagaaa ggggactggg 420 tggtccacaa ttccgagtgg gcgaacaggg tgagattcac tttgatgaag ctggattata 480 acagacctgt agtattgctt tgtcacacag aggaatttgc ttacgaggta ggagcgctac 540 ccatactggc aatcactatg gacgaggggg tctggagaaa gaacattgag aacagaggat 600 acctgggaaa gatgttctcc gagctaagtt atgagagcgt gaggacacat acaaaagtgc 660 agatgttcaa ggcgaatagc aatgaacagg tggagcgggc gatattgaga gtgatgtcgt 720 tggtaggcat accgagcgcg gcaccactta aatatgatgc tgacaacccc acacccggat 780 actcggccgg attgccggat tgggtgatga aaggtgagaa agacaaatgc cacttagaac 840 tgcttatgga catgtacgac caagactgtg taccaaaaga gtgcatggac tacttctgcc 900 ggaatgagac tatacctgca tcgtacgggt ttggtattac aatgaatgat tgggcgcgtg 960 tgttcggaac aataacttat tacatgcgtg atattaaaca cgagatacct gaaggagacc 1020 cggaggatat atggccgtac tcatctgaca gagaaaagac aagattgaac gttaacatga 1080 aaagacttct gacgtccact aatttgatgg atatagaagg agcgaaaacg ttggctgcta 1140 cacatgttgg ggcgacgaat ggattcgttt ctacactggt atcattctgg actggaatac 1200 aggagttgta caaagatgag gttgatctga tgccactctg tttggttgga caagcaaact 1260 gggtgtactg ccagaagatg gtgcatgatc tgatgagaca gagcaggcac tatatgaata 1320 ctgaggtgga acaacagact aagcaaagta taatgtatat ggaccagctt gttgggcgga 1380 ggcttttcaa gccggactgg cagaaagagg ttgatgaccg gcaaggtaat catggtttcg 1440 cgcaacacat ggcgtacgat ccgaacactg ggacttggga ggtcgaacaa tacaggaagg 1500 acttcaacca cgcgcttaat gatgcatttg caagggttaa atcagcaccg cgtgcgctaa 1560 acatcaaaga ttacgctgac ttcttcagca agagaggtga gtggctaacg aaaggtagta 1620 cagtgtacaa cgagatacct aaagagcaca gacaaacggt ggttagcata gtggatgaaa 1680 caggtgacct aattaggagt gttgatgtaa gacacaacaa gaagagcttg tttgaaatgt 1740 cgaacgtatt tcacttgcta ggcgacaaat ttgagctcag gaatataacg aaagcagttc 1800 cgaagttgaa cgagtgtggt tacaaggaca ggacactatt accaggatcc cttttccatt 1860 atctaatgtt ctcatatgtc cttgagttcg ttgagaagca agctcaaata ggtagtgtga 1920 gggtgaacgc accctcagac aatgacatca gatacatgga caagaaaatg acacaaggtg 1980 tgtatcatat gatgtttgac tgggctaatt tcaatgcttt ccactcagcg gaggagatgt 2040 ccttagtaat cgagaaatta gcgtacgtag taccagcacc gccagattat gacatgtttg 2100 ttaaaggcgt ggcagcaagt atgtgggata tgattttgat ggatccggat ggtgaggtac 2160 acaagataga aacaggtctg tactcagggt ggagaggtac atcatttctc aactcagtgt 2220 tgaattcatg ttacacaaca tgtgctagaa tgtcctacga aaggatacac aaatatgatc 2280 cgttcgtgta tatcgatcac ggtggtgatg atatagatgg aggaattagg aacatgggtg 2340 atggtgtaaa gatgcctgtg gtgatggaga agatgcaatt cgaggctcag aagattaaac 2400 aaatgattgg aatagattcc gaattcttca ggattacctt cacagcaagt ggtgcttatg 2460 gtagtgcgac acgagcacta gcaaggtttg tctcaggtaa ttgggaaggt agcggtgtta 2520 taccattgcg tgagaggata tctgggctga tggatcaaat ggcaaaaata tgtaggcgtg 2580 ggtttcacca ggaggtcggg cacacgttat tgtcactggc tattgctcat tggggcagag 2640 ttaaaccaga caaagactgg ttggcactac ctgcagtggc gatacacggt tgtgaagaac 2700 aaggaggact tggcgtgcca gacaaggatg gttgtgtctg gtggcttgac aaagagataa 2760 ggggtaaagt gagcgatagg aaagtgctac caccggggaa actagtggca gaagaaacga 2820 ttaggaatct ggccgctgag ctgaacaggc ttaacattga tgctgtacac acggggccag 2880 tggcgacaaa gttggctgcg atgtcattcg atgagagagg agaagaaaca tttgaaacat 2940 tggagaaagc tgacgctgaa gtggttaaga aagttagtgt catagtaccc aaagtggacg 3000 aacatgagtt tgaaaagatg atggcgtacg tagagactaa taggtcagtt aagaaagatc 3060 tggcgagatt ggaaaggtat aggatgctgg aagggcacct acagacgaat ggtgttacta 3120 ttacatcaga agacttggca aaaatgctac agataaacct accggaagga gcattactgt 3180 ttaacccgag caagtattac aggaggttgg tcggtgaaga atgggcaaaa gtgatagaag 3240 agtactggct agcgtgtatg cagtatgctg ggtacgataa agataaagca gaggatgtgt 3300 ttgagacatt aacttacatg gtgagtgtgg ttttcaaaca ccatgtgtaa actgcgatat 3360 taaatagaga agaaaatttg acgattgtca ataatatgc 3399 //