ID AJ717582; SV 1; circular; genomic DNA; STD; VRL; 2797 BP. XX AC AJ717582; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 5) XX DE East African cassava mosaic Kenya virus segment DNA A, complete sequence, DE isolate EACMKV-[K228] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2797 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 3001480a009c90834aedd7dc152556cb. XX FH Key Location/Qualifiers FH FT source 1..2797 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMKV-[K228]" FT /mol_type="genomic DNA" FT /country="Kenya:Suba, Migori/Kwinyonki" FT /clone="K228FA-5[2002]" FT /db_xref="taxon:393599" FT CDS 174..503 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A886" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A886" FT /protein_id="CAJ78334.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGSEYIRDL FT IGVLRCKSYVEATRRYHNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDV" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A885" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A885" FT /protein_id="CAJ78335.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGIIHR FT VGKRFCVKSIYILGKIWMDENVKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A884" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A884" FT /protein_id="CAJ78336.1" FT /translation="MDSRTGELITAPQARNGVFTWEITNPLYFEITNHDKRPGNMNHDI FT ITLQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRYQVLKYLDMIGVISTNT FT VLHAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A883" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A883" FT /protein_id="CAJ78337.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQEAREHEPRHHHTPDTVQPQ FT HQEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A882" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A882" FT /protein_id="CAJ78338.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALDQIRQLPTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNHRFFDLISPSRSAHFHPNIQGAKSSSDVQSYM FT DKDGDTIQWGKFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLDRIFQEPLAPYVSPFLSSSFTNVPEELDDWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFITINEPL FT FSSAHQSPTPHSEDQGRQT" FT CDS complement(2290..2493) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A881" FT /protein_id="CAJ78339.1" FT /translation="MRMGNLICMPSFSSRASTIVPTIDSSTSYPLPGQHISIQTFRGLN FT RVPTSSPIWTRTETPSNGASFR" XX SQ Sequence 2797 BP; 709 A; 569 C; 726 G; 793 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacag gatggccgcg cccgtgaaag 60 aaagtggtcc ctgcgcactt gttttggtcg gccagtcata ttcacgcgtg aaagtctaga 120 tatttgttgt ttgtctttat agacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt gaacgatttt cccgaaaccg ttcacggttt ccgttctatg cttgctgtta 240 aatacctgtt acatctggaa caggaatacg atcgcggtac tgtcgggtct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatatcata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta taggatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc ctatgaacag agggatgatg ttaagcacac tggtatggtc 600 cgatgtgtca gtgatgttac tcgtgggtca ggcattatcc atagagtcgg caagaggttt 660 tgtgttaagt ccatatatat attgggcaag atctggatgg atgagaatgt caagaagcaa 720 aatcatacga accatgttat gttcttcctt gttcgagata gaaggcctta tggtccgagt 780 cctcaagatt ttggacaagt gttcaacatg tttgataatg aacctactac tgcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaagt tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagcgttg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcgaat cctgtgtacg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagtg tgtttagtaa tacatcgtac agaacatgat caacagcgtg cagtacagtg 1200 ttagtggaaa taacgcctat catatctaaa tacttgagca cttgatatct aaatactctt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttcct gatgttgtgg ttgaaccgta tctggagtgt gatgatgtcg 1380 tggttcatgt tccctggcct cttgtcgtgg ttggtgattt cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc attccttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgacggccc tggtcttcgc tgtgcggtgt tggactttga tgggcactag 1620 agaacaatgg ctcgttgatg gtgatgaagg tggcattctt taaagcccag gctttaaggg 1680 actggttctt ttcctcgtcc agaaactctt tatatgatga tgttggtcct ggattgcaaa 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtctct ttgggccccc ataaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactaaga tccaggtgtc 1920 cacacaagta gttgtgtggt cccagagagc gggcccacat cgtcttcccc gtcctactat 1980 cgccctcgat gacgatacta ctcggtctcc atggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca atcatcaagt tcctcaggaa cgttagtgaa agaagatgaa agaaatggag 2100 aaacataagg agccagaggc tcttgaaaaa tccgatctaa attgctattt aaattatgaa 2160 actgtaaaac aaaatctttt ggagcgagtt cccttattac attaagagcc tctgacttat 2220 ttgcggagtt gagagctttg gcgtaagcgt cattggcgga ttgttgtccg cctcgagcag 2280 atcgtccgtc tatctgaaac ttgccccatt ggatggtgtc tccgtccttg tccatatagg 2340 actggacgtc ggaactcgat ttagccccct gaatgtttgg atggaaatgt gctgaccggg 2400 aaggggatat gaggtcgaag aatcgatggt tggtacaatt gtacttgccc tcgaactgaa 2460 tgagggcatg cagatgaggt tccccattct catggagttc tctgcagatc ttgatgaaca 2520 atttatttgt tggggttggg agttgtcgga tctgatccaa tgcctcctct ttggatagag 2580 agcatttggg atatgtcagg aaatagtttt tggctttgat gctaaaacga ccagcccttg 2640 gcattttcgc tgtcgtatag caatcggggg gcactcaaag tctgtagcaa tcgggggaac 2700 ggggggcaat ttatatgatg ccccctaaat ggcatttatg taatatcctc atgtaatttg 2760 aatttcaaac gtggaaagcg gccatccgtt taatatt 2797 //