ID AJ717579; SV 1; circular; genomic DNA; STD; VRL; 2797 BP. XX AC AJ717579; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 5) XX DE East African cassava mosaic Kenya virus segment DNA A, complete sequence, DE isolate EACMKV-[K230] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2797 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; e6c9920ad45034cd4caf575938d825ba. XX FH Key Location/Qualifiers FH FT source 1..2797 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMKV-[K230]" FT /mol_type="genomic DNA" FT /country="Kenya:Kuria, Kehancha/Kambi" FT /clone="K230FA-4[2002]" FT /db_xref="taxon:393599" FT CDS 173..529 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A898" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A898" FT /protein_id="CAJ78316.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 333..842 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8A3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8A3" FT /protein_id="CAJ78317.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYIYWARSGWMRMSRSKIIRTMLCSSLFEIEGLMVRVLKILDKCSTCLIM FT NLLLQL" FT CDS complement(1105..1509) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8A2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8A2" FT /protein_id="CAJ78318.1" FT /translation="MDSRTGELITAPQAKNGVFTWDITNPLYFEITDHDKRPGNMNHDI FT ITLQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRYQVLKYLDMIGVISINT FT VLQAVDHVMYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1250..1657) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8A1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8A1" FT /protein_id="CAJ78319.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRIAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHRPRQETGEHEPRHHHTPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1566..2645) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8A0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8A0" FT /protein_id="CAJ78320.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALDQIRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNQRFFDLISPSRSAHFHPNIQGAKSSSDVKSYM FT DKDGDTIQWGEFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLDRIFQEPLVPYVSPFLSSSFTNVPEELDDWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKHQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSEDQGRQT" FT CDS complement(2198..2494) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A899" FT /protein_id="CAJ78321.1" FT /translation="MKMGNLICMPSFSSRANTIVPTNDSSTSYPLPGQHISIQTFKELN FT QAPTSNPIWTRTATPSNGASFRSTDDLLEEDNNPPMTLTPRLLTQQISQRLLM" XX SQ Sequence 2797 BP; 720 A; 565 C; 716 G; 796 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacaa gatagccacg cccgtgaaag 60 aaagtggtcc cccccacttg ttatggtcgg ccagtcatat tcacgcgtga aagtctagat 120 atttgttgtt tgtctttata gacttcgtcg cgaagtagtg gagcgcgtca acatgtggga 180 tccattgttg aacgattttc ccgaaaccgt tcacggtttc cgttctatgc ttgctgttaa 240 atacctgtta catctggaac aggaatacga tcgcggtact gtcggggctg agtatatacg 300 tgatctaata ggggttctac ggtgtaagag ttatgtcgaa gcgaccagga gatataataa 360 tctcaacacc cgtatccaag gtgcggagga ggctgaactt cgacagccca tacacgaacc 420 gtgttgttgc ccccactgtc cgcgtcacca gaagcaaaat atgggccaac aggcccatgt 480 atcggaagcc caagatgtac agaatgtatc gaagcccaga tgtccctaag ggctgtgaag 540 gcccatgtaa ggttcagtcc tatgaacaga gggatgatgt gaagcacact ggtatggtcc 600 gatgtgtcag tgatgttact cgtggatcag gtattaccca tagagtcggg aagaggtttt 660 gtgtgaagtc catatatata tattgggcaa gatctggatg gatgagaatg tcaagaagca 720 aaatcatacg aaccatgtta tgttcttcct tgttcgagat agaaggcctt atggtccgag 780 tcctcaagat tttggacaag tgttcaacat gtttgataat gaacctacta ctgcaactgt 840 gaagaatgat cttagggacc ggtatcaggt gttacgtaaa ttttatgcga ctgttgttgg 900 tggaccctct gggatgaagg aacaagctct ggttaagagg ttttttagga tcaataatca 960 tgtagtgtat aatcatcagg aacaggccaa gtatgagaat catactgaga atgcgttgtt 1020 attgtatatg gcatgtacac atgcctcgaa tcctgtgtac gctacgctga aaatacgcat 1080 ctatttctat gatgcagtga caaattaata aaggttgaat tttattgcat gttgctccgt 1140 aacttggagt gtgtttagta atacatcgta cataacatga tcaaccgctt gaagtacagt 1200 attaatggaa ataacgccta tcatatctaa atacttgagc acttgatatc taaatactct 1260 taagaaaaga ccagtctgag gccgtaaggt cgtccagacc ttgaagttga gaaaacactt 1320 gtgaatcccc aatgccttcc ggatgttgtg gttgaaccgt atctggagtg tgatgatgtc 1380 gtggttcatg ttccccggtc tcttgtcgtg gtcggtgatt tcgaaataga ggggatttgt 1440 tatgtcccag gtaaaaacgc cattctttgc ttgaggcgca gtgatgagtt cccctgtgcg 1500 agaatccatg gttgatgcag tcgatatgga gatagaacga gcagccgcat tcgaggtcta 1560 cccgcctacg tctgacggcc ctggtcttcg ctatgcggtg ttggactttg atgggcactt 1620 gagaacaatg gctcgtggag ggtgatgaag gtggcattct ttaaagccca ggctttaagg 1680 gactgatgct tttcctcgtc cagaaactct ttatatgaag atgttggtcc tggattgcag 1740 aggaagatag tgggaatgcc gcctttaatt tgaattggct tcccgtactt tgtattgctt 1800 tgccagtccc tttgggcccc catgaattct ttgaagtgtt tgaggtagtg ggggtcgacg 1860 tcatcaatga cgttgtacca ggcgtcgttg ctgtagacct ttggactaag gtccaggtgt 1920 ccacataagt agttgtgtgg tcccagagat cgggcccaca tcgtcttccc tgtcctacta 1980 tcgccctcga tgactatact actcggtctc catggccgcg cagcggaacc catcacgttt 2040 tcggaaaccc aatcgtcaag ttcctcagga acgttagtga aagaagaaga aagaaagggt 2100 gaaacataag gaaccagagg ctcctgaaaa atcctatcta aattgctatt taaattatga 2160 aactgtaaaa caaaatcttt tggcgctagt tcccttatta cattaagagc ctctgactta 2220 tttgctgagt taagagcctt ggcgtaagcg tcattggcgg attgttgtcc tcctcgagca 2280 gatcgtccgt cgatctgaaa ctcgccccat tggatggtgt cgccgtcctt gtccatatag 2340 gatttgacgt cggagcttga tttagctcct tgaatgtttg gatggaaatg tgctgaccgg 2400 gaaggggata tgaggtcgaa gaatcgttgg ttggtacaat tgtatttgcc ctcgaactga 2460 atgagggcat gcagatgagg ttccccattt tcatggagtt ctctgcagat cttgatgaac 2520 aatttatttg ttggggtttg gagttgtcgg atctgatcca atgcctcctc tttggataga 2580 gagcatttgg gataagtcag gaaatagttt ttggctttga tgctaaaacg accagccctt 2640 ggcattttcg ctgtcgtata gcaatcgggg ggcactcaaa gtctgtagca atcgggggaa 2700 tggggggcaa tttatatgat gccccctaaa tggcatttat gtaatatcct caatgaattt 2760 gaatttcaaa cgtgaaagcg gccatccgta taatatt 2797 //