ID AJ717577; SV 1; circular; genomic DNA; STD; VRL; 2795 BP. XX AC AJ717577; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 5) XX DE East African cassava mosaic Kenya virus segment DNA A, complete sequence, DE isolate EACMKV-[K238] XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; AC1 protein; KW AC2 protein; AC3 protein; AC4 protein; AV1 protein; AV2 protein. XX OS East African cassava mosaic Kenya virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2795 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 65c28cade048409a11bf81b4cac8a420. XX FH Key Location/Qualifiers FH FT source 1..2795 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMKV-[K238]" FT /mol_type="genomic DNA" FT /country="Kenya:Kuria, Kehancha/Masagangi" FT /clone="K238FA-1[2002]" FT /db_xref="taxon:393599" FT CDS 173..529 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A898" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A898" FT /protein_id="CAJ78304.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 333..1106 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8A9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8A9" FT /protein_id="CAJ78305.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENVKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1103..1507) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8B4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8B4" FT /protein_id="CAJ78306.1" FT /translation="MDSRTGELITAPQAKNGVFTWDITNPLYFEITNHDKRPGNMNHDI FT ITLQIRFNHNIRKALGIHKCFLSFKVWTTLRPQTGLFLRVFKYQVLKYLDMIGVIYINT FT VLHAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1248..1655) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8B3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8B3" FT /protein_id="CAJ78307.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRIAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHQPRQETREHEPRHHHTPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1564..2643) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8B2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8B2" FT /protein_id="CAJ78308.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALDQIRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNQRFFDLISPSRSAHFHPNIQGAKSSSDVKSYM FT DKDGDTIQWGEFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLDRIFQEPLVPYVSPFLSSSFTNVPEELDDWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEDKHQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSEDPGRQT" FT CDS complement(2196..2492) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8B1" FT /protein_id="CAJ78309.1" FT /translation="MRMGNLICMPSFSSRASTIVPTNDSSTSYPLPGQHISIQTFKELN FT QAPTSNPIWTRTATPSNGASFRSTDDLLEEDNNQPMTLTPRLLTQQISQRLLM" XX SQ Sequence 2795 BP; 718 A; 566 C; 718 G; 793 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacaa gatggccgcg cccgtgaaag 60 aaagtggtcc cccccacttg ttttggtcgg ccagtcatat tcacgcgtga aagtctagat 120 atttgttgtt tgtctttata gacttcgtcg cgaagtagtg gagcgcgtca acatgtggga 180 tccattgttg aacgattttc ccgaaaccgt tcacggtttc cgttctatgc ttgctgttaa 240 atacctgtta catctggaac aggaatacga tcgcggtact gtcggggctg agtatatacg 300 tgatctaata ggggttctac ggtgtaagag ttatgtcgaa gcgaccagga gatataataa 360 tctcaacacc cgtatccaag gtgcggagga ggctgaactt cgacagccca tacacgaacc 420 gtgttgttgc ccccactgtc cgcgtcacca gaagcaaaat atgggccaac aggcccatgt 480 atcggaagcc caagatgtac agaatgtatc gaagcccaga tgtccctaag ggctgtgaag 540 gcccatgtaa ggttcagtcc tatgaacaga gggatgatgt gaagcacact ggtatggtcc 600 gatgtgtcag tgatgttact cgtggatcag gcattactca tagagtcggg aagaggtttt 660 gtgtgaagtc catatatata ttgggcaaga tctggatgga tgagaacgtc aagaagcaaa 720 atcatacgaa ccatgttatg ttcttccttg ttcgagatag aaggccttat ggtccgagtc 780 ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctactact gcaactgtga 840 agaatgatct tagggaccgg tatcaggtgt tacgtaaatt ttatgcgact gttgttggtg 900 gaccctctgg gatgaaggaa caagctctgg ttaagaggtt ttttaggatc aataatcatg 960 tagtgtataa tcatcaggaa caggccaagt atgagaatca tactgagaat gcgttgttat 1020 tgtatatggc atgtacacat gcctcgaatc ctgtgtacgc tacgctgaaa atacgcatct 1080 atttctatga tgcagtgaca aattaataaa ggttgaattt gattgcatgt tgctccgtaa 1140 cttggagtgt gtttagtaat acatcgtaca gaacatgatc aacagcgtga agtacagtat 1200 taatgtaaat aacgcctatc atatctaaat acttgagcac ttgatattta aatactctta 1260 agaaaagacc agtctgaggc cgtaaggtcg tccagacctt gaagctgaga aaacacttgt 1320 gaatccccaa tgccttccgg atgttgtggt tgaaccgtat ctggagtgtg atgatgtcgt 1380 ggttcatgtt ccctggtctc ttgtcgtggt tggtgatttc gaaatagagg ggatttgtta 1440 tgtcccaggt aaaaacgcca ttctttgctt gaggcgcagt gatgagttcc cctgtgcgag 1500 aatccatggt tgatgcagtc gatatggaga tagaacgagc agccgcattc gaggtctacc 1560 cgcctacgtc tgacggcccg ggtcttcgct atgcggtgtt ggactttgat gggcacttga 1620 gaacaatggc tcgtggaggg tgatgaaggt ggcattcttt aaagcccagg ctttaaggga 1680 ctgatgcttg tcctcgtcca gaaactcttt atatgatgat gttggtcctg gattgcagag 1740 gaagatagtg ggaatgccgc ctttaatttg aattggcttc ccgtactttg tattgctttg 1800 ccagtccctc tgggccccca tgaattcttt gaagtgtttg aggtagtggg ggtcgacgtc 1860 atcaatgacg ttgtaccagg cgtcgttgct gtagaccttt ggactaagat ccagatgtcc 1920 acacaagtag ttgtgtggtc ccagagatcg ggcccacatc gtcttccctg tcctactatc 1980 gccctcgatg actatactac tcggtctcca tggccgcgca gcggaaccca tcacgttttc 2040 ggaaacccaa tcgtcaagtt cctcaggaac gttagtgaaa gaagaagaaa gaaatggaga 2100 aacataagga accagaggct cttgaaaaat cctatctaaa ttgctattta aattatgaaa 2160 ctgtaaaaca aaatcttttg gcgctagttc ccttattaca ttaagagcct ctgacttatt 2220 tgctgagtta agagccttgg cgtaagcgtc attggctgat tgttgtcctc ctcgagcaga 2280 tcgtccgtcg atctgaaact cgccccattg gatggtgtcg ccgtccttgt ccatatagga 2340 tttgacgtcg gagcttgatt tagctccttg aatgtttgga tggaaatgtg ctgaccggga 2400 aggggatatg aggtcgaaga atcgttggtt ggtacaattg tacttgccct cgaactgaat 2460 gagggcatgc agatgaggtt ccccattctc atggagttct ctgcagatct tgatgaacaa 2520 tttatttgtt ggggtttgga gttgtcggat ctgatccaat gcctcctctt tggatagaga 2580 gcatttggga taagtcagga aatagttttt ggctttgatg ctaaaacgac cagcccttgg 2640 cattttcgct gtcgtatagc aatcgggggg cactcaaagt ctgtagcaat cgggggaatg 2700 gggggcaatt tatatgatgc cccctaaatg gcatttatgt aatatcctca ttgaatttga 2760 atttcaaacg tgaaagcggc catccgtata atatt 2795 //