ID AJ717567; SV 1; circular; genomic DNA; STD; VRL; 2785 BP. XX AC AJ717567; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA A, complete DE sequence, isolate EACMZV-[K10] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2785 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 44eb95158368bf925ed88e9c83c5a2e6. XX FH Key Location/Qualifiers FH FT source 1..2785 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K10]" FT /mol_type="genomic DNA" FT /country="Kenya:Kilifi, Kwamugomba" FT /clone="K10AFA-2[2001]" FT /db_xref="taxon:223275" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8H5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8H5" FT /protein_id="CAJ78244.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVQATRRYNNLNIRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCS" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8H4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8H4" FT /protein_id="CAJ78245.1" FT /translation="MSKRPGDIIISTSVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGPGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFKINNHVVCNHQEQAKYEN FT HTENALLLYMACTHASNLVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8H3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8H3" FT /protein_id="CAJ78246.1" FT /translation="MDSRTGELITAHQAKNGVFTWEITNPLYFEITNHDRRPGNMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFKVWTTLRPQTGLFLKVFRYQVLKYLDMIGVISINT FT VLQAVAHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8H2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8H2" FT /protein_id="CAJ78247.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKNRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSQEWRFYLGNNKSPIFRNHQPRQEAREHEPRHHHTPDTVQPQ FT PEEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8H1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8H1" FT /protein_id="CAJ78248.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHEALSQILNIPTPTNKKYIK FT VCRELHDDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDARSARGGCHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPPAPYVSPFLSSSFTNIPEDLEVWVSENVMGSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGSTSSYKEFLDEEKNQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSEEQGRQT" FT CDS complement(2230..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8H0" FT /protein_id="CAJ78249.1" FT /translation="MGNLISTCLFSSKANSHAQISDSSTWYPQHDQHISIRTFKELNPA FT PTSSPTSTKMGIPLSGANSRSTPDRLEAAAIMLMTHVPKH" XX SQ Sequence 2785 BP; 720 A; 549 C; 721 G; 795 T; 0 other; accggatggc cgcgcccgaa aaagcatgtg gaccccacag gatggccgcg cccgtgaaag 60 catgtggtcc ccgcgcactt gtttcggtcg gccagtcata ttcacgcgtg gaagtctaga 120 tatttgttgt gtgtctttat agacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt aaacgatttc cctgaaaccg ttcacggttt ccgttccatg cttgctgtta 240 aatacctgtt acatcttgaa caggaatacg atcgcgggac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcca agcgaccagg agatataata 360 atctcaacat ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgttcctaa gggctgtgaa 540 ggcccatgta aggttcagtc gtatgaacag agggatgatg ttaagcacac tggtatggtt 600 cgatgtgtca gtgatgttac gcgtgggcca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aatcatacga accatgttat gttcttcctc gttcgagata gaaggcctta tgggccgagt 780 ccgcaagatt ttggacaagt gttcaacatg tttgataatg aaccgactac ggcaaccgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagcgctg gttaagaggt tttttaagat caataatcat 960 gtagtgtgta atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcgaat cttgtgtacg ctacgctgaa aatacgcatc 1080 tatttttatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagtg tgtttagtaa tacatcgtac agaacatgag caacagcttg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cctgatatct aaatactttt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttcct caggttgtgg ttgaaccgta tctggagtgt gatgatgtcg 1380 tggttcatgt tcccgggcct cctgtcgtgg ttggtgattt cgaaatatag gggatttgtt 1440 atttcccagg taaaaacgcc attcttggct tgatgcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgacggccc tgttcttcgc tgtgcggtgt tggactttga tgggcactag 1620 agaacaatgg ctcgtggagg gtgatgaagg tggcattctt taaagcccag gctttaaggg 1680 actggttctt ttcctcgtcc agaaactctt tatatgatga tgtggatcct ggattgcaga 1740 ggaagatagt gggaatgcca cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtctct ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacataagta gttgtgtgga cccagagagc gggcccacat tgtcttcccc gtcctactat 1980 cgccctcgat gacgatacta ttaggtctcc atggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaaga tcctcaggaa tgttagtaaa agaagaagac agaaaaggag 2100 aaacataagg agctggtggc tcttgaaaaa tcctatctaa attactactt aagttatgat 2160 actgaaaaat aaattctttt gggagtttct ccttaataat tagaagtgct gctgccttgg 2220 aacctgagtt taatgcttcg gcacatgcgt cattagcatt atggcagccg cctctagccg 2280 atctggcgtc gatctggaat tcgccccact cagtggtatc cccatctttg tcgatgtagg 2340 acttgacgtc ggagctggat ttagctcctt gaatgttcgg atggaaatgt gttgatcgtg 2400 ttggggatac caggtcgaag aatcgcttat ttgtgcatga gaatttgcct tcgaactgaa 2460 taagcatgtg gagatgaggt tgcccatcgt cgtgaagttc tctgcacact ttgatgtatt 2520 tcttgtttgt gggagttggg atgtttaata tttgggataa tgcttcgtgt ttagatagag 2580 aacatttggg atatgtgaga aaatagtttt tggcctgtat tttaaaacgc ttggggggag 2640 tcatttatgc gagagcaatt ggagacacct cggttgatgt ctctactgaa ttggagacaa 2700 tatatagtgt ctccaaatgg cataatggta attagataga tctattttca aaatttgaac 2760 caaaagcggc catccgtata atatt 2785 //