ID AJ717543; SV 1; circular; genomic DNA; STD; VRL; 2801 BP. XX AC AJ717543; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-KE2 segment DNA A, complete sequence, DE isolate EACMV-KE2[K16] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic virus-KE2 OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2801 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; dd6f854646e23aeea04bfd60a8e91220. XX FH Key Location/Qualifiers FH FT source 1..2801 FT /organism="East African cassava mosaic virus-KE2" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-KE2[K16]" FT /mol_type="genomic DNA" FT /country="Kenya:Malindi, Msabaha-Kari" FT /clone="K16AFA-3[2001]" FT /db_xref="taxon:374778" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8W8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8W8" FT /protein_id="CAJ78100.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKNYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8W7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8W7" FT /protein_id="CAJ78101.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGPGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHALNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8W6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8W6" FT /protein_id="CAJ78102.1" FT /translation="MDSRTGELITAPQAMNGVFTWEITNPLYFAITDHDKRPGNMNHDI FT ITLQIRFNHNIRKALGIHKCFLNFKVWTTLRPPTGLFLRVFRYQVLKYLDMIGVISINT FT VLHAVAHVLYDVLLNTLQVTEHHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8W5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8W5" FT /protein_id="CAJ78103.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSNEWRFYLGNNKSPLFRNHRPRQEAREHEPRHHHTPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8W4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8W4" FT /protein_id="CAJ78104.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLKAFSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTNVPEELEVWVSENVMVSAARPWRPNSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEERNRSLKAWALKNATFITLHEPL FT FSSSHQSPTPHSEDQGRQT" FT CDS complement(2254..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8W3" FT /protein_id="CAJ78105.1" FT /translation="MGCLISMFSSNSKASSNVPTPDSSISFPHPDQHISIRTFRALNHH FT PMSRLTLKREGNFLTMEFSKSMPEVPGGRASI" XX SQ Sequence 2801 BP; 739 A; 560 C; 731 G; 771 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacca catggcggca cgcgtgaaag 60 aaagtggtcc ccgcgcactt gtattggtcg gccagtcata ttcacgcgtg gaagtctaga 120 tatttgtggg ttgacgttat atacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt gaacgatttt cccgaaaccg ttcacggttt ccgttctatg cttgctgtta 240 aatacctgtt acatctggaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga attatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc ctatgaacag agggatgatg ttaagcacac tggtatggtt 600 cgatgtgtca gtgatgttac ccgtgggcca ggcattaccc atagagtcgg gaagaggttt 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aatcatacga accatgttat gttcttcctg gttcgagata gaaggcctta tgggccgagc 780 cctcaagatt ttggacaagt gttcaacatg tttgataatg aacctactac ggcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg gcatgaagga acaagcgctg gttaagaggt tttttaggat caataatcat 960 gttgtgtata atcatcagga acaggccaag tatgagaatc atacggagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgccttgaat cctgtgtacg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg gtgctccgta 1140 acttggagtg tgtttagtaa tacatcgtac agaacatgag caacagcgtg aagtacagtg 1200 ttaatggaaa taacgccaat catatctaaa tatttgagca cttgatatct aaatactctt 1260 aagaaaagac cagtcggagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggagtgt gatgatgtcg 1380 tggttcatgt tccctggcct cttgtcgtgg tcggtgattg cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc attcattgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatgtag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgacggccc tggtcttcgc tgtgcggtgt tggactttga tgggaacttg 1620 agaacaatgg ctcgtggagg gtgatgaagg tggcattctt caaagcccag gctttaaggg 1680 accgattcct ttcctcgtcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtccct ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacataaata attatgtggt cccaatgacc tggcccacat ggtcttccct gtacgactat 1980 caccttctag aacaatactg ttgggtctcc aaggccgcgc agcggaaacc atcacgttct 2040 cggaaaccca gacttcaagt tcctcaggaa cgttagtaaa agaggatgat aagaacggac 2100 taacgtaagt ttggggcgga gcctggaaga ttcgatctgc gttagcagat atgttatgga 2160 actgtaaaaa aaaggacttg ggatcttttt ctttgataat ttgaagagct tctgatttag 2220 aagaagcatt caacgcgtct gcatatacct gagctaaatg ctggccctcc cccctggcac 2280 ttcgggcatc gacttggaaa attccatcgt caagaaattc ccctcccttt tcaatgtaag 2340 ccttgacatc ggatgatgat ttagcgccct gaatgttcgg atggaaatgt gttgatctgg 2400 atggggaaat gagatcgaag aatctggggt tggtacattg gaacttgcct tcgaattgga 2460 tgagaacatg gagatgaggc accccatcct gatgtagttc tctgcaaacc ctaatgaatt 2520 tgatattcgt cggataagaa aaagctttta attgggaaag ggcctcttcc tttgttaatg 2580 agcatcgggg ataggtgatg aaataatttt tggcatttat ttgaaaacga ccggctcttg 2640 gcatatttgc tgtcgttttg gatcggggga cactcaaaac tccagggaaa cggtggaatg 2700 gggggcatta tataggatgt cccccaatgg catatgtgta aataggtaga gttccattca 2760 aaatttgaat tgcgaatatt ggcggccatc cgattaatat t 2801 //