ID AJ704954; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC AJ704954; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-Uganda variant segment DNA B, complete DE sequence, isolate EACMV-UG[K66] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus (Uganda variant) OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2753 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 2e10bdc7ae8a714d470f3e34acf4c3ca. XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="East African cassava mosaic virus (Uganda FT variant)" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-UG[K66]" FT /mol_type="genomic DNA" FT /country="Kenya:Butere, Mumias/Enjinja" FT /clone="K66FB-23[2002]" FT /db_xref="taxon:375009" FT CDS 325..1125 FT /transl_table=1 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:A4CYM1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A4CYM1" FT /protein_id="CAG29072.1" FT /translation="MSPVRQCKMYSVYRRGYKTPYRSPYGARGTPYVNRKTSGKQTAKS FT RVSRKLAYESPKGLYTRRSLEDIHNGAALKLPQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLNLRVSGTVNVSQSGGDDNMGERTTMRGIFFMACLVDKKPFVPDGVSILPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLSRTTCDVYSQFVLNYVG" FT CDS complement(1256..2275) FT /transl_table=1 FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:A4CYM2" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A4CYM2" FT /protein_id="CAG29073.1" FT /translation="MLPCLQDILSTLFCLLYISSLRFLTLVFFIPRMDNQFTVTDNNYI FT NSKRTEYALTNDAAPINLQFPSSFEQATMRLKGRCMKIDHIIIEYRNQVPFNATGSVIV FT EIRDNRVSLEDAAQAAFTFPIACNVDLHYFSSTYFSISDPSPWKIMYRVEDSNVVEGVK FT FASIKAKLRLSSAKHSTDIRFKPPTINILSKGYTKDCIDFWSVEKGETRRRLLNPTPHA FT HSPRPIAHRPITILPGETWATKSQIGLPSSSGPTRLEHFRSQSMRMDPSTIPTDLDNDS FT TDYPYQRLHRLHTPELDPGDSVSQAQSDSVSRKDLETLLESTINKCLIKIKSEAPRPL" XX SQ Sequence 2753 BP; 765 A; 462 C; 745 G; 781 T; 0 other; accggatggc cgcgcccgaa aagcagatgg accccacaat ggcccccacg cactaagaaa 60 cgtcagccaa ccatgtgcaa gactgggaga ctcggtattt acgcatggag gattaagtgg 120 gccctacgta ctaagtttga caggcaattt tattgcgatg tgtgtatcat attttataag 180 tctgttacgg gccaatctaa agttatgtta tggggtctat cataaaaaag caaaatatag 240 gttcctattt acatatggat tatagtttta tgtgcgcata tatgatccgc cacgtgttat 300 taatgtgtcc tataaatatg gtacatgtct cccgttcgtc aatgcaagat gtattcggta 360 tacagacgtg ggtataagac gccgtatagg agtccgtatg gcgctcgtgg aacaccatat 420 gtgaatcgta agacctctgg taaacagacg gctaaatctc gtgtatcgcg aaagttggcg 480 tatgaatcgc caaaaggtct atatacgcga cgctcattgg aggatatcca taatggggct 540 gccttgaagt tgccgcaaca gggggattat acgtcctacg tgacactccc atgtcgaggc 600 atcgatggta atgggggtag gtctgtggat catataaaat tattaaattt gagggtttct 660 gggaccgtca acgtcagtca atccggtggt gatgacaata tgggagagag aacgaccatg 720 aggggtattt ttttcatggc gtgtcttgtt gataagaaac ccttcgttcc agatggggtc 780 agcatattgc cgacgtttaa tgagttgttc ggggaatatg aatccgttta tggcatgcct 840 aggttgaagg aaaacgtccg tcaccgttat cgcgttattg ggacgtcgaa attatatata 900 acgaccgatg aagatcacat ccagaagcct tttagtctac gtcgaagact aagtggaggg 960 aaatatccta tatggtcgtc gttcaaggat gtggataata gtagtacagg tggtaactat 1020 aaaaatataa ataagaacgc tatactcgtt agttatgtgt gggtgtcgct aagtcggacc 1080 acgtgtgatg tgtattcgca gtttgtactt aattacgtcg gctgataata aaactatata 1140 agtgtttgat ggacattaat tatgtgggaa cgaacgaaaa agagatgaac atgaatggta 1200 agcatataga gttttattat gttccgaagc aaatatggta catataaatg gttcattaca 1260 atggccttgg tgcttcggat ttgatcttga tgaggcactt gttgatggta ctctcaagca 1320 gtgtctcgag gtcctttctg gatactgagt cggattgggc ctgtgatacc gagtcccctg 1380 ggtctaactc tggtgtgtgt aatctgtgta gtctctggta aggatagtct gtggagtcgt 1440 tgtctaagtc tgttggtatt gtcgatgggt ccattctcat ggactgtgaa cgaaagtgtt 1500 ccagccttgt tgggcctgat gagctgggta gcccaatctg agacttagtt gcccatgttt 1560 ctccaggtag gatggtgatg ggcctgtggg ctatgggtcg tggactatga gcatgtggag 1620 ttggatttag taatctccgt cttgtttctc ctttttccac agaccaaaag tctatgcagt 1680 ctttcgtgta tcccttggat aagatgttaa ttgttggggg tttgaaacgt atgtctgtgg 1740 aatgtttggc cgatgataat cggagcttgg ctttgatgga tgcgaatttc acgccttcta 1800 cgacgttgga gtcctcgact cggtacatta ttttccaagg ggaggggtcc gaaatcgaaa 1860 aatatgtaga agagaagtag tggaggtcga cgttgcaagc tattgggaaa gtgaatgctg 1920 cttgagctgc gtcttcaagg ctgacgcgat tgtctcggat ttctacgata accgacccag 1980 ttgcgttaaa tgggacctgg ttgcggtatt caattataat gtggtcgatt ttcatacatc 2040 ggcctttgag tcgcatggtc gcctgctcga atgagctcgg aaattggaga ttgattggtg 2100 cagcatcgtt ggttaaggcg tactcggtgc gtttgctgtt tatgtaatta ttgtctgtga 2160 cggtgaattg gttgtccatt ctaggaatga aaaaaacaag ggttaggaaa cggagagaag 2220 agatgtataa aaggcagaac aaggttgata aaatgtcttg tagacatgga agcatatatg 2280 cagtgaatat atataagaac acacgaaaat agagcaagga tcatatatgt gtaaccggcc 2340 gcgcagcgga ttggaattca gagaaatcga cgaacaaaga ataaagtcga atggggttat 2400 gtgattaaac cacttactga atcaccgagg aagcagtcga gagtgaattc ctgttccaag 2460 ttggagaaaa caaagaaaga aaagtagaac gtattgggag aaaaaggaaa gagagtagat 2520 gttatgcgtg gtgtcgttaa atgatatgcc atggggtgtt tatataggcg ttaaaagcca 2580 cacgtggtag agagagaaag aagagagagg cgagagcatt cgggggacac tcaaagtctc 2640 tagcaattgg gggaacgggg gtcaatttat atgatgtccc ctaaatggca tttatgtaat 2700 atcctcatta aagttgaagt tcagacgtgg aaagcggcca tccgtataat att 2753 //