ID   AJ512963; SV 1; circular; genomic DNA; STD; VRL; 1386 BP.
XX
AC   AJ512963;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   SB32-1
XX
KW   rep gene; replication associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1386
RA   Briddon R.W.;
RT   ;
RL   Submitted (25-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; 68633777712bd88b497265624f6f9835.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1386
FT                   /organism="Nanovirus-like particle"
FT                   /host="Ageratum conyzoides"
FT                   /mol_type="genomic DNA"
FT                   /country="Kenya"
FT                   /clone="SB32-1"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             97..1044
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA12"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA12"
FT                   /protein_id="CAD56276.1"
FT                   /translation="MPALQSVFWCFTIFFTSSSIPELTPLFENSCVSYACWQEEESPTT
FT                   KRRHLQGYLQCKGKRSFNQVKLLFGDLNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GEYTAAGSHKRRQRESVQRSPVRMAEENPSVYRRVKAKLAEEEFQKSAPEIQISNLKSW
FT                   QLRLRQLLQRDPDDRTIYWVYGPTGGEGKSTFARDLFRTGTWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLVEMFKDRLVVSNKYEPIMAPMTKCIHVVVMSNFPPDM
FT                   EKVSSDRVHVIPCIPCGACLKHHVAEIKCDEYLD"
XX
SQ   Sequence 1386 BP; 384 A; 252 C; 325 G; 425 T; 0 other;
     accccgcctc tcctccccct tcctcggatc cctcgtgcga ttcacgtgcc cttttccctt        60
     gagaaaattg agatatttgt ttccgcaggg tttaaaatgc ctgccctaca aagtgtcttc       120
     tggtgcttta ccatcttctt cacttcatct tccatccctg aattaactcc tctctttgag       180
     aattcttgtg tctcgtatgc ctgttggcaa gaagaggaat cacctacgac gaaacgtcgt       240
     catctccagg gatatcttca gtgtaagggc aaaaggagtt ttaatcaggt taaattatta       300
     tttggtgacc tgaatcctca tcttgagaaa caacgagctc gtaagacaga cgaagctcgt       360
     gattattgta tgaaagaaga aactagggtt tctggcccct ttgaatttgg ggaatataca       420
     gctgctgggt cacataagag aagacaacga gagtccgtac aaagatctcc ggtgagaatg       480
     gcggaggaga atccctccgt ttacaggcgt gtaaaggcga agcttgctga ggaagaattc       540
     cagaagtccg ctcctgaaat tcaaatttca aatttgaaat cttggcagct gcgcctcaga       600
     cagcttcttc agagggaccc agatgaccgc actatctact gggtttatgg acctactggt       660
     ggagaaggaa aatccacctt tgctagagac ctcttcagga ctgggacctg gttctataca       720
     cgtggaggat ctgcagataa tgtagcttac cagtatatag gatgtttagg aaataatatt       780
     gtatttgata ttcctcgtga taagaaggat tatctacagt atagtttagt agagatgttt       840
     aaggataggt tagtagttag taataagtat gagcctatta tggcccctat gactaaatgt       900
     attcatgttg tagttatgtc taattttcct ccagacatgg agaaggttag tagtgatagg       960
     gtccatgtaa ttccttgtat tccatgtggt gcctgtctta agcatcatgt tgctgaaata      1020
     aaatgtgatg agtatttgga ttaatatttg tgtgattcta ttaaataaaa aagaatggcc      1080
     gcaggccgaa tgggcgaagc ccatcatagt cacagttttg cttcttgaaa acaagaagga      1140
     atgtaatgaa aaaaaaaata tttgagtttt gacatctttt tttaatggtg ggctgtttgg      1200
     atttggattt gggttgcaac tgtataatgg taaactaggg gttctggccc atttgtttga      1260
     tttactttcg ctagggacct atttgcaatt tctgaaaagt tttagaaacg cggaggggct      1320
     tatttgcaaa ttattgaaag tccgtacggg atctcgagga tatataagcg aggcgggggt      1380
     agaatt                                                                 1386
//