ID   AJ512960; SV 1; circular; genomic DNA; STD; VRL; 1379 BP.
XX
AC   AJ512960;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   SB45-2
XX
KW   rep gene; replication associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1379
RA   Briddon R.W.;
RT   ;
RL   Submitted (25-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; ee9125be0504aac429344560de211a21.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1379
FT                   /organism="Nanovirus-like particle"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="Egypt"
FT                   /clone="SB45-2"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             92..1039
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA12"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA12"
FT                   /protein_id="CAD56273.1"
FT                   /translation="MPALQSVFWCFTIFFTSSSIPELTPLFENSCVSYACWQEEESPTT
FT                   KRRHLQGYLQCKGKRSFNQVKLLFGDLNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GEYTAAGSHKRRQRESVQRSPVRMAEENPSVYRRVKAKLAEEEFQKSAPEIQISNLKSW
FT                   QLRLRQLLQRDPDDRTIYWVYGPTGGEGKSTFARDLFRTGTWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLVEMFKDRLVVSNKYEPIMAPMTKCIHVVVMSNFPPDM
FT                   EKVSSDRVHVIPCIPCGACLKHHVAEIKCDEYLD"
XX
SQ   Sequence 1379 BP; 382 A; 250 C; 321 G; 426 T; 0 other;
     accccgcctc tcctccccct cctcggatcc ctcgtgcgat tcacgtgcct tccttgagaa        60
     aattgagata tttgtttccg cagggtttaa aatgcctgcc ctacaaagtg tcttctggtg       120
     ctttaccatc ttcttcactt catcttccat ccctgaatta actcctctct ttgagaattc       180
     ttgtgtctcg tatgcctgtt ggcaagaaga ggaatcacct acgacgaaac gtcgtcatct       240
     ccagggatat cttcagtgta agggcaaaag gagttttaat caggttaaat tattatttgg       300
     tgacctgaat cctcatcttg agaaacaacg agctcgtaag acagacgaag ctcgtgatta       360
     ttgtatgaaa gaagaaacta gggtttctgg cccctttgaa tttggggaat atacagctgc       420
     tgggtcacat aagagaagac aacgagagtc cgtacaaaga tctccggtga gaatggcgga       480
     ggagaatccc tccgtttaca ggcgtgtaaa ggcgaagctt gctgaggaag aattccagaa       540
     gtccgctcct gaaattcaaa tttcaaattt gaaatcttgg cagctgcgcc tcagacagct       600
     tcttcagagg gacccagatg accgcactat ctactgggtt tatggaccta ctggtggaga       660
     aggaaaatcc acctttgcta gagacctctt caggactggg acctggttct atacacgtgg       720
     aggatctgca gataatgtag cttaccagta tataggatgt ttaggaaata atattgtatt       780
     tgatattcct cgtgataaga aggattatct acagtatagt ttagtagaga tgtttaagga       840
     taggttagta gttagtaata agtatgagcc tattatggcc cctatgacta aatgtattca       900
     tgttgtagtt atgtctaatt ttcctccaga catggagaag gttagtagtg atagggtcca       960
     tgtaattcct tgtattccat gtggtgcctg tcttaagcat catgttgctg aaataaaatg      1020
     tgatgagtat ttggattaat atttgtgtga ttctattaaa taaaaaagaa tggccgcagg      1080
     ccgaatgggc gaagcccatc atagtcacag ttttgcttct tgaaaacaag aaggaatgta      1140
     atgaaaaaaa aaatatttga gttttgacat ctttttttaa tgttgggctg tttggatttg      1200
     gatttgggtt gcaactgtat aatgttaaac tagggtttct ggcccatttg tttgatttac      1260
     tttcgctagg gacctatttg caatttctga aaagttttag aaacgcggag gggcttattt      1320
     gcaattattg aaagtccgta cgggatccga ggatatataa gcgaggcggg tgtagtatt       1379
//