ID   AJ512958; SV 1; circular; genomic DNA; STD; VRL; 1380 BP.
XX
AC   AJ512958;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   SB5-2
XX
KW   rep gene; replication associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1380
RA   Briddon R.W.;
RT   ;
RL   Submitted (25-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; 8b78707070584cafa9e07cd03c7d7fea.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1380
FT                   /organism="Nanovirus-like particle"
FT                   /host="Ageratum conyzoides"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /clone="SB5-2"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             79..1026
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA15"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA15"
FT                   /protein_id="CAD56271.1"
FT                   /translation="MPTIQSQWWCFTVFFLSVTAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSLAQVKALFGDLNPHLEKQRARKTDDARDYCMKEETRVSGPFEF
FT                   GEYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKTKIAEEEFQKSASEIQISNLKSW
FT                   QLRLKTLLDRDPDDRTIIWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISSDRVHVIPCIPCGVCLKHHIGEIKCEEYVD"
XX
SQ   Sequence 1380 BP; 427 A; 251 C; 311 G; 391 T; 0 other;
     acccagcctc ggttccctct ccttggatcc ctcgtgcgaa tcacgtgctc tctgtctttt        60
     atatccttaa aagaaaaaat gcctacgatt cagtctcaat ggtggtgttt cactgtcttt       120
     tttctctccg ttaccgctcc cgacctggtg cctctgtttg agaacacaca cgttagttac       180
     gcctgctggc aagaggaaga gtctcccacg actcgacgac gccacttgca ggggtatctc       240
     cagttgaagg gaaaaagaag ccttgcgcag gtgaaggcac tcttcggaga cctcaaccct       300
     cacttggaga aacagcgagc tcgtaagacc gacgatgctc gcgattactg tatgaaagag       360
     gaaactaggg tttccggtcc ctttgaattt ggggaatatt gtcctgctgg ttctcataaa       420
     cgccgacaaa gggaaagtgt aattcgatct ccggtgagaa tggcagaaga aaatccgtcc       480
     gtcttccggc gagtaaagac aaagattgca gaggaagaat tccagaagag cgcctctgag       540
     attcaaattt caaatttgaa atcttggcaa ttgcgcctga agacgctcct cgacagggac       600
     ccagatgacc gcactatcat ctgggtatat ggacccacag gtggggaagg aaaatccacc       660
     tttgccaggg acctgtacag aagtgggtca tggttctata cacgtggagg atctgcagat       720
     aatgtagctt accagtacat aggatgttta ggaaataata ttgtatttga tatccctcgt       780
     gataagaagg attatctaca atatagttta atagagatgt ttaaggatag gttaatagtt       840
     agtaataagt acgagcctct tatggctccg ttaattaatt gtattcatgt tgtagttatg       900
     tctaattttc tccctgattt tgagaagatt agtagtgata gggtccatgt aattccttgt       960
     attccttgtg gtgtttgtct taaacatcac attggtgaaa taaaatgtga agaatatgtt      1020
     gattaaatat tgttgtatat ttatatattt tgcttctcta aaaaaagaag gaatgaaatg      1080
     aaaaaaaaat aaatattgaa tcatatttta ttattcttga gaaaatcagg ccccgcaggg      1140
     gcatctgtta aaaatatttt gtttctttaa aaaaagaaag aatgaaatga aaaaaaaatg      1200
     aatataaaaa aaataaaaaa actcagggtt tataatgtgg gccatactaa gtgcgctaga      1260
     tgagagagaa aatgcaattg ggtactgtag caacacggag ggactaaata tgtaaatatt      1320
     gagcttggct cccgggatcc taggatataa ataacacgtc accgaggctg gtgtagtatt      1380
//