ID   AJ512948; SV 1; circular; genomic DNA; STD; VRL; 1389 BP.
XX
AC   AJ512948;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   SB41-5
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KW   rep gene; replication associated protein.
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OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1389
RA   Briddon R.W.;
RT   ;
RL   Submitted (24-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; 934587acbb83bfbec70f0b7f03ebb144.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1389
FT                   /organism="Nanovirus-like particle"
FT                   /host="Ageratum conyzoides"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /clone="SB41-5"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             79..1026
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA21"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA21"
FT                   /protein_id="CAD56261.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSLAQVKALFGDLNPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT                   GEYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSSSEIQISNLKSW
FT                   QLRLKTLLDRDPDDRTIIWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLIKCIHVLVMSNFLPDF
FT                   EKISTDRVHVIPCIPCGVCLKHHIHEIKCDEYLD"
XX
SQ   Sequence 1389 BP; 423 A; 261 C; 309 G; 396 T; 0 other;
     acccagcctc ggttccctct ccttggatcc ctcgtgcgaa tcacgtgctc tctctcttct        60
     gaatccttaa aagaaaaaat gcctacgatt cagtctcagt ggtggtgttt cactgtcttc       120
     tttctctccg ctactgctcc cgacctggtg cccctctttg agaacacaca cgttagttac       180
     gcctgctggc aagaggaaga gtctcccacg actcgacgac gccacttgca ggggtatctc       240
     cagttgaagg gaaaaagaag ccttgcgcag gtgaaggcac tcttcggaga cctcaaccct       300
     cacttggaga aacagcgagc tcgtaagaca gacgaagctt gcgactattg tatgaaagag       360
     gaaactaggg tttccggtcc ctttgaattt ggggaatatt gtcctgctgg ttctcataaa       420
     cgccgacaaa gggaaagtgt aattcgatct ccagtgagaa tggcagagga aaatccgtcc       480
     gtcttccgac gagtaaaggc aaagattgca gaggaagaat tccagaagag ctcctctgag       540
     attcaaattt caaatttgaa atcttggcaa ttgcgcctga agacgctcct cgacagggac       600
     ccagatgacc gcactatcat ctgggtatat ggacccactg gtggggaagg aaaatccacc       660
     tttgccaggg acctgtacag aagtgggtca tggttctata cacgtggtgg ttctgcagat       720
     aatgttagct accagtacat aggatgttta ggaaataata ttgtatttga tatccctcgt       780
     gataagaagg attatctaca atatagttta atagagatgt ttaaggatag gttaatagtt       840
     agtaataagt acgagcctct tatggctccg ttaattaaat gtattcatgt tttagttatg       900
     tctaattttc tccctgattt tgagaaaatt agtactgata gggtccatgt aattccttgt       960
     attccttgtg gtgtttgtct taaacatcac attcatgaaa ttaaatgtga tgagtatttg      1020
     gattaatttt gtttctttaa aaaaagaaag aatgaaatga aaaaaaaaag aaatattgaa      1080
     tcatatttta ttattcttat gaaaaatagg gccccgcagg ggcatctgtt aaaaatattt      1140
     tgtttcttta aaaaagaaag aatgaaatga aaaaaaaatg aataaaaaaa aaataaaaaa      1200
     actcagggtt tattatgtgg gccatactaa gtgcgctaga gagagagaaa atgcaattgg      1260
     ttactgttcc aacacggagg gactaaagtt gttattattg taagttcaat ggcagcgcct      1320
     gtaattattg agctaggcct cccgggatcc tagcttataa atacacgtca ccgaggctgg      1380
     tgtagtatt                                                              1389
//