ID AJ495812; SV 1; circular; genomic DNA; STD; VRL; 2748 BP. XX AC AJ495812; XX DT 30-JUL-2002 (Rel. 72, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Tomato yellow leaf curl Thailand virus-[Y72] complete genome, isolate Y72 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW complete genome; pre-coat protein; rep protein; KW replication enhancer protein; trancriptional activator protein; KW transcriptional regulator protein. XX OS Tomato yellow leaf curl Thailand virus-[Y72] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2748 RA Zhou X.; RT ; RL Submitted (12-JUL-2002) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268, RL Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RX DOI; 10.1007/s00705-004-0334-7. RX PUBMED; 15593415. RA Li Z., Zhou X., Zhang X., Xie Y.; RT "Molecular characterization of tomato-infecting begomoviruses in Yunnan, RT China"; RL Arch. Virol. 149(9):1721-1732(2004). XX DR MD5; a6a80a44a92e11dc0a67b293e43029b5. DR EuropePMC; PMC2170441; 17963488. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC3126389; 21378048. XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="Tomato yellow leaf curl Thailand virus-[Y72]" FT /segment="DNA-A" FT /host="Lycopersicon esculentum" FT /isolate="Y72" FT /mol_type="genomic DNA" FT /country="China:Yunnan province" FT /db_xref="taxon:221543" FT CDS 135..473 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:Q8JJV7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8JJV7" FT /protein_id="CAD42615.1" FT /translation="MWDPLLNEFPENVHGFRCMLAVKYLQAVEKTYSPDTLGFDLIRDL FT ISVIRAKNYVEATSRYSHFHARLESTSPSELRQPIQQPCCCPHCPRHKRADMEEPTCIQ FT KAQDLQNV" FT CDS 295..1065 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q8JJV6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8JJV6" FT /protein_id="CAD42616.1" FT /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQIWK FT NRPAYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(1062..1466) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q8JJV5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8JJV5" FT /protein_id="CAD42617.1" FT /translation="MDSRTGELLTATQSESGVYIWTVKNPLYFKITKHLERPFLRNHDI FT ITLQIQFNHNLRKALGIHKCFLVCKIWTHLHPQTSGFLRVFKYQCIKYLDRLGVISIKN FT VIRAISHVLYNVLEGTIDVFEAHDIKFNIY" FT CDS complement(1207..1611) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q8JJV4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8JJV4" FT /protein_id="CAD42618.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKRAIRRRRVDLPCGCSYFVAIG FT CHNNGFTHRGTTHCNSIREWRIYLDGQKSPIFQDNQAPRETIPEEPRHNHIANPVQPQP FT EESVGDTQMFSSLQNLDSFTSSDLGFLKSI" FT CDS complement(1514..2599) FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:Q8JJV3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8JJV3" FT /protein_id="CAD42619.1" FT /translation="MPPSKKFLINAKNYFLTYPHCSLTKEEALSQILNLSTPTNKLFIR FT ICRELHEDGTPHLHVLIQFEGKFKCQNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT DKDGDVLDHGIFQIDGRSARGGCQTANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFSTPKEEYISPFCSSSFDQVPDELEEWASENVVTAAARPLRPVSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWALKNAIFVTLQGPL FT YSGTHQGTTPNSQEGNQTKES" FT CDS complement(2149..2448) FT /gene="AC4" FT /product="transcriptional regulator protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8JJV2" FT /protein_id="CAD42620.1" FT /translation="MKMGLLTCMSSSNLKENSSAKTTDSSISHPQPGQHISIRTFRELK FT AQQMLKHTWIKTETCLIMEFSKSMEDRLEEVAKLQTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2748 BP; 736 A; 548 C; 603 G; 861 T; 0 other; accggatggc cgcgattttt tttaaagtgg tcccgttgat gtgatgtctc atccaataag 60 aacgctccct caaagcttaa ttatttatgg tcccctatat aagtcttggt ccctaagttt 120 cgtggaaatt caaaatgtgg gatccactcc taaacgaatt tccagaaaac gtccacggtt 180 ttcgttgtat gctagccgtg aagtatctgc aagcggtcga gaagacttat tcccctgata 240 ccctagggtt tgatctcatc cgtgatctca tcagtgtaat tcgtgcaaag aattatgtcg 300 aagcgaccag cagatattct catttccacg cccgtctcga aagtacgtcg ccgtctgaac 360 ttcgacagcc catacaacag ccgtgctgct gtccccactg tccgcgtcac aaaagggcag 420 atatggaaga accgacctgc atacagaaag cccaggatct acagaatgta tagaagccct 480 gatgtcccta agggatgtga aggcccctgt aaggtccaat ctttcgatgc gaagaacgac 540 attgggcata tgggtaaggt gatctgcttg tctgacgtta ctcgtggtat tgggcttacc 600 catcgagttg gcaagcgatt ctgtgtcaag tcactttatt tcgttggcaa gatatggatg 660 gatgaaaata ttaaggttaa gaatcacact aacaccgttt tgttctggat agttagagat 720 cgacgtccta ctggaacgcc gtatgatttt cagcaggttt ttaatgttta tgataatgag 780 ccttccacgg caactgtgaa aaacgaccag cgtgatcgtt tccaggtgat caggagattc 840 caggcaacgg tgaccggtgg acaatatgca gcgaaggaac aggcgattat tagaaagttt 900 tatcgtgtta ataattatgt agtgtataat caccaggaag ccgggaagta tgagaaccat 960 actgaaaatg ccttgttatt gtatatggca tgtacccatg cctctaatcc cgtgtatgct 1020 actttgaaag tcaggagtta tttctatgac tcagtgacga attaataaat attaaatttt 1080 atatcatgtg cttcaaatac atcaattgtt ccttctaata cattgtataa tacatgagat 1140 attgccctaa ttacattttt tatactaatc acgcctaatc tatctaaata tttaatacat 1200 tgatatttaa atactcttaa gaaacccgag gtctgaggat gtaaatgagt ccagattttg 1260 cagactagaa aacatttgtg tatccccaac gctttcctca ggttgtggtt gaactggatt 1320 tgcaatgtga ttatgtcgtg gttcctcagg aatggtctct ctaggtgctt ggttatcttg 1380 aaatataggg gatttttgac cgtccagata tatacgccac tctctgattg agttgcagtg 1440 agtagttccc cggtgcgtga atccattatt gtgacagcct attgcgacga agtacgaaca 1500 tccacagggt aaatcaactc tccttcgtct gattgccctc ttggctattc ggtgttgtac 1560 cttgatgggt acctgagtag agtgggcctt ggagggtgac gaagatcgca ttctttaagg 1620 cccagtttct aagtgcggaa ttcttttcct cttccaagta ctctttatag ctggagtttg 1680 gtccaggatt gcagaggaag atagtgggaa ttccgccttt aatttgaact ggttttccgt 1740 atttggtgtt gctttgccag tccctttggg cccccatgaa ctctttaaag tgttttagat 1800 agtgcggatc gacgtcatcg atgacgttga accatgcatc attattgtac acttttggac 1860 taaggtctaa atggccacat agataattat gtggtcccaa agacctagcc cacatcgtct 1920 tccccgttct gctatcaccc tctatgacta tacttactgg tcttaatggc cgcgcagcgg 1980 cagtgacaac attttcagac gcccactctt caagttcatc cggaacttga tcaaaagaag 2040 aagaacaaaa aggagaaata tattcctctt ttggagtact aaaaatccta tctaaattac 2100 tatttaaatt atgaaattgt aaaacaaaat cttttggtgc cttttctctt aatatattga 2160 gggccgaagc tttggaccct gaattgattg cctcggcata tgcgtcgttt gcagtttggc 2220 aacctcctct agccgatctt ccatcgattt ggaaaattcc atgatcaagc acgtctccgt 2280 ctttatccat gtatgtttta acatctgttg agcttttagc tccctgaatg ttcggatgga 2340 aatgtgctga cctggttggg gatgtgagat cgaagaatcg gttgttttgg cacttgaatt 2400 ttccttcaaa ttggatgagg acatgcaggt gaggagtccc atcttcatga agttccctgc 2460 agattctgat gaataattta ttagttgggg ttgaaagatt taatatttgg gaaagtgctt 2520 cctctttggt gagtgagcag tgtgggtatg tgaggaaata attctttgca tttattaaaa 2580 atttctttga aggaggcatg ttgacctggt caatcgggtc ctctcaaact tggctatgca 2640 atcggggaat gggtccttat ttatagttga ggacctaaat ggcataattg taaataagta 2700 tattaaattc aaaattcaaa atttaatcgc ggccatccgt ataatatt 2748 //