ID   AJ459315; SV 1; linear; genomic RNA; STD; VRL; 1813 BP.
XX
AC   AJ459315;
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DT   06-JAN-2003 (Rel. 74, Created)
DT   30-APR-2003 (Rel. 75, Last updated, Version 3)
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DE   Sweet potato mild mottle virus partial cp gene for polyprotein, genomic
DE   RNA, isolate RUK
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KW   coat protein; cp gene; NIb gene; nuclear inclusion b protein; polyprotein.
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OS   Sweet potato mild mottle virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
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RN   [1]
RP   1-1813
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (29-APR-2002) to the INSDC.
RL   Mukasa S.B.B., Department of Plant Biology, Uppsala Genetics Centre, SLU,
RL   Box 7080, SE 750 07 Uppsala, SWEDEN.
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RN   [2]
RX   DOI; 10.1007/s00705-002-0930-3.
RX   PUBMED; 12607100.
RA   Mukasa S.B., Rubaihayo P.R., Valkonen J.P.T.;
RT   "Sequence variability within the 3'-proximal part of the Sweet potato mild
RT   mottle virus genome";
RL   Arch. Virol. 148(3):487-496(2003).
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DR   MD5; 15d218290dbea8a0a81ec6e6cdbd2ca3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1813
FT                   /organism="Sweet potato mild mottle virus"
FT                   /host="sweet potato"
FT                   /isolate="RUK"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda"
FT                   /db_xref="taxon:41459"
FT   CDS             <1..1506
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8B326"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B326"
FT                   /protein_id="CAD30639.1"
FT                   /translation="GNNSGQPSTVVDNTLILMIAMEYAIAKIFVTRPDIRYVCNGDDLL
FT                   INCPKGVASAISEHFKDAFADLSLNYDFDHVCDSITDVDFMSHSFMWLDSEQMFIPKLD
FT                   KERIVAILEWERSDEQFRTRSALNAAYIESFGYEDLMDEIEKFSHFWAKEHGLNNVLME
FT                   REKVRDLYVNEDFDASAFEKFYPETFSPFDVYVEPHASTSRTIEELQQEMEDLDADTTI
FT                   TVVQRETQKARIRDQIEALRAQQIVRPPEAQLQPDVNPTQIVTFEPPRVTGFGALWIPR
FT                   QQRNYMTPAYIEKIQGYVPHSNLIESVLASEAQLTSWFENTSRDYQVSMDVFMSSILPA
FT                   WIVNCIINGTSQERTNEHTWRAVIMANMEDQEVLYYPIKPIIINAQPTLRQVMRHFGEQ
FT                   AVAQYMNSLQVGKPFTVKGAVTAGYANVQDAWLGIDFLRDTMPLTTKQMEVKHQIIAAN
FT                   VTRRKIRVFALAAPGDGDELDTERHVVDDVARGRHSLRGAQLD"
FT   mat_peptide     1..678
FT                   /product="nuclear inclusion b"
FT                   /note="NIb"
FT   mat_peptide     679..1506
FT                   /product="coat protein"
FT                   /note="CP"
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SQ   Sequence 1813 BP; 520 A; 353 C; 453 G; 487 T; 0 other;
     ggtaacaata gtgggcagcc ctcaacagtt gttgacaata cattgatcct gatgattgct        60
     atggagtacg cgatagccaa gatttttgtt acacgtcccg acatcaggta tgtctgcaat       120
     ggggatgacc tcttgattaa ttgcccgaag ggtgttgcaa gcgccattag tgagcatttc       180
     aaagacgcat tcgctgattt aagtctaaac tatgactttg atcatgtttg tgattcaatt       240
     acagacgttg attttatgag tcatagcttt atgtggctgg attctgaaca gatgtttata       300
     ccaaagttgg ataaggagcg aattgtggca atcttggagt gggagaggag tgatgagcaa       360
     ttcagaacaa ggagcgccct gaacgctgct tatatcgaga gttttggata tgaagatttg       420
     atggatgaga ttgaaaaatt ttctcatttt tgggctaagg agcatggtct caataacgtc       480
     ttgatggagc gagaaaaggt tagagacttg tacgtcaatg aagatttcga cgcgtcggcc       540
     tttgagaagt tctatccgga aactttttca ccatttgacg tttatgttga accacatgca       600
     tcgacatcca gaacaatcga agaactgcag caagaaatgg aggatttaga cgcggatacg       660
     acaatcactg tggtccagag agaaacacag aaggcaagga ttagagacca aattgaggca       720
     cttagggcac aacaaattgt gagacctcct gaagcacagc tacagcctga cgtaaatccc       780
     actcaaattg ttacgtttga accaccaaga gtcactggat ttggcgcttt atggattccg       840
     cgccaacaaa ggaactacat gacgccagct tatatcgaga agatacaagg ttatgttcca       900
     cactcaaact tgattgaatc tgtactagct agtgaagctc aattgactag ttggttcgag       960
     aacacgagca gggattacca agttagtatg gatgtcttta tgagttcaat actgccagca      1020
     tggattgtca attgcataat caatggaaca tctcaggagc gcactaacga gcatacatgg      1080
     agggctgtga tcatggcgaa tatggaggat caagaagtgc tttattaccc catcaagccc      1140
     ataataatca atgctcaacc aactctgagg caggtgatgc gccatttcgg agaacaagcc      1200
     gttgctcaat acatgaacag ccttcaagtg ggaaaaccat ttacagtgaa aggtgccgtg      1260
     actgctggtt acgctaatgt tcaagatgcc tggctaggta ttgacttcct ccgagacacg      1320
     atgccgttga ctacgaaaca gatggaagtc aagcaccaaa ttatcgcagc gaatgtcaca      1380
     aggcggaaaa tccgtgtttt tgctcttgca gcaccggggg atggcgatga actagacaca      1440
     gaaaggcacg tcgtcgacga tgtggctcgg ggccgtcata gtctgagagg agctcaactc      1500
     gactaaatga gcacgttatc tttaatttca actgcgtgtt tttatattaa ttacgtttca      1560
     tgctttgtgt ttgtttgttg tggcacttga accaggtaca gctggcaggt gtttcggcat      1620
     ggtgtggtta gacaattggt tcgcaccggt ggtctaagaa gcgctatgta tcacgtggtt      1680
     ggttaattca tgactatatg gatcaatcaa gaagcgtcta tcgcccaaaa gggcaccaga      1740
     aaatggttgc gtcattcgtg gcgtaatcag tttttggagt ttggctaggt aacttgttgc      1800
     ctatccaaaa gcc                                                         1813
//