ID   AJ459314; SV 1; linear; genomic RNA; STD; VRL; 1813 BP.
XX
AC   AJ459314;
XX
DT   06-JAN-2003 (Rel. 74, Created)
DT   30-APR-2003 (Rel. 75, Last updated, Version 3)
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DE   Sweet potato mild mottle virus partial cp gene for polyprotein, genomic
DE   RNA, isolate BNY
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KW   coat protein; cp gene; NIb gene; nuclear inclusion b protein; polyprotein.
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OS   Sweet potato mild mottle virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
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RN   [1]
RP   1-1813
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (29-APR-2002) to the INSDC.
RL   Mukasa S.B.B., Department of Plant Biology, Uppsala Genetics Centre, SLU,
RL   Box 7080, SE 750 07 Uppsala, SWEDEN.
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RN   [2]
RX   DOI; 10.1007/s00705-002-0930-3.
RX   PUBMED; 12607100.
RA   Mukasa S.B., Rubaihayo P.R., Valkonen J.P.T.;
RT   "Sequence variability within the 3'-proximal part of the Sweet potato mild
RT   mottle virus genome";
RL   Arch. Virol. 148(3):487-496(2003).
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DR   MD5; fbe90328c3ee66422bc14f0f87500707.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1813
FT                   /organism="Sweet potato mild mottle virus"
FT                   /host="sweet potato"
FT                   /isolate="BNY"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda"
FT                   /db_xref="taxon:41459"
FT   CDS             <1..1506
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8B327"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B327"
FT                   /protein_id="CAD30638.1"
FT                   /translation="GNNSGQPSTVVDNTLILMIAMEYAIAKVFVTRPEIKYVCNGDDLL
FT                   INCPRSTASAISEHFKDAFADLSLNYDFDHVCDAITDVDFMSHSFMWLDAEQMYIPKLD
FT                   KERIVAILEWERSDEQFRTGSALNAAYIESFGYEDLMVEIEKFAHFWAKEHGLDDVLMD
FT                   REKVKNLYVNEDFDASAFEKFYPETFSPFDVYVEPHASTSKTIEELQQELEDLDADTTI
FT                   TVVQRETQKARIRDQIETLRAQQIVRPPEAQLQPDVAPTQIVTFEPPRVTGFGALWIPR
FT                   QQRSYMTTAYIEKIKAYVPHSNLIESGLASESQLTSWFENTCRDYQVSMDVFMSTILPA
FT                   WIVNCIINGTSQERTNEHTWRAVIMANMEDQEVLYYPIKPIIINAQPTLRQVMRHFGEQ
FT                   AVAQYMNSLQVGKPFTVKGAVTAGYANVQDAWLGIDFLRDTMKLTTKQMEVKHQIIAAN
FT                   VTRRKIRVFALAAPGDGDELDTERHVVDDVARGRHSLRGAQLD"
FT   mat_peptide     1..678
FT                   /product="nuclear inclusion b"
FT                   /note="NIb"
FT   mat_peptide     679..1506
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 1813 BP; 524 A; 338 C; 456 G; 495 T; 0 other;
     ggcaataata gcggtcaacc ttcaacagtt gttgataaca cgttgatcct gatgattgct        60
     atggaatatg cgatagctaa ggtttttgtc acacgccctg aaatcaagta tgtttgtaat       120
     ggggacgatc tcctaattaa ttgtccgaga agcactgcaa gcgccatcag tgagcatttc       180
     aaagacgcgt tcgcagactt aagcttgaac tatgatttcg atcatgtttg tgatgcaatt       240
     acagatgttg acttcatgag tcatagcttc atgtggctag atgccgagca gatgtatata       300
     ccaaagctgg acaaggagcg aatcgtggca attttggagt gggagagaag tgatgagcaa       360
     tttagaacag ggagcgccct gaatgctgct tatattgaga gttttggata cgaagatttg       420
     atggttgaaa ttgaaaaatt cgcccacttt tgggcaaaag agcatggtct cgatgatgtc       480
     ttgatggatc gagaaaaagt taaaaacttg tacgttaatg aagatttcga tgcgtcagcc       540
     tttgagaagt tttatccaga aacattttcg ccatttgatg tttatgttga accacatgcg       600
     tcgacatcca aaacaattga agagttgcag caagaattgg aggatttgga tgcagacaca       660
     acaatcactg tggtccagag ggaaacacag aaggcaagga taagggacca aattgagaca       720
     cttagggcac aacaaattgt gagacctcct gaggcacagc tacaacctga cgtggctccc       780
     acgcaaattg ttacgtttga accgccgaga gtcactggat tcggcgcttt gtggattccg       840
     cgccaacaaa ggagctacat gacaacagca tacatcgaga agataaaggc ttatgtccca       900
     cactcaaact tgattgaatc tggattagct agtgaatctc aattgactag ttggttcgag       960
     aacacgtgta gagattatca agttagtatg gatgtcttca tgagcacaat actgccagca      1020
     tggattgtca attgcataat caatggaacg tcacaggagc gcactaatga gcatacgtgg      1080
     agggctgtga tcatggcaaa tatggaagat caagaagtac tttattatcc catcaagccc      1140
     attatcatca atgctcagcc aactctgagg caggtgatgc gccattttgg tgagcaagct      1200
     gtcgcacaat atatgaatag ccttcaagtt ggaaaacctt tcacggtgaa aggcgcagta      1260
     actgctggtt atgccaatgt tcaagacgct tggctgggta ttgactttct tcgggataca      1320
     atgaagttga caacgaaaca gatggaagtt aagcaccaga ttattgcagc aaacgttaca      1380
     aggcggaaga ttcgtgtttt tgctcttgca gccccgggag atggcgatga actggacaca      1440
     gaaaggcacg ttgtcgacga tgtagctaga ggtcgtcata gtctgagagg agctcaactc      1500
     gactaaatga gcatgttatc tttaatttct actgcgtgtt ttattttagt tatgttctat      1560
     gctttatgtt cgtttgttgt ggcacttgaa ccaggtacag ctggcaggtg tttcggcatg      1620
     gtgtggttag acaattggtt cgcaccggta gtctaagaag cgctgtgtat cacgtggttg      1680
     gttaattcat agtccatatg ggttgatcaa gaagcgttta tcgcccaaaa gggtaccaga      1740
     aaaaggttgc gtcattcgtg gcgcaatcag tttttggagt ttggctaggt aacttgttgc      1800
     ttatccaaaa gcc                                                         1813
//