ID   AJ416153; SV 1; circular; genomic DNA; STD; VRL; 1360 BP.
XX
AC   AJ416153;
XX
DT   14-FEB-2002 (Rel. 70, Created)
DT   06-MAR-2002 (Rel. 71, Last updated, Version 3)
XX
DE   Ageratum yellow vein virus-associated DNA Rep gene for
DE   replication-associated protein
XX
KW   Rep gene; replication-associated protein.
XX
OS   Ageratum yellow vein alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
XX
RN   [1]
RP   1-1360
RA   Stanley J.;
RT   ;
RL   Submitted (08-OCT-2001) to the INSDC.
RL   Stanley J., Department of Disease and Stress Biology, John Innes Centre,
RL   Norwich Research Park, Colney, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RA   Saunders K., Bedford I.D., Stanley J.;
RT   "Adaptation from whitefly to leafhopper transmission of an
RT   autonomously-replicating nanovirus-like DNA component associated with
RT   ageratum yellow vein disease";
RL   J. Gen. Virol. 83:909-915(2002).
XX
DR   MD5; d54dd382762a55d3dd7427bb1cf5c871.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Ageratum yellow vein alphasatellite"
FT                   /host="Ageratum conyzoides"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /mol_type="genomic DNA"
FT                   /country="Singapore"
FT                   /clone="pGEM-AYVV2"
FT                   /note="Nanovirus-like component (DNA 2) associated with
FT                   ageratum yellow vein disease"
FT                   /db_xref="taxon:187850"
FT   CDS             57..944
FT                   /gene="Rep"
FT                   /product="replication-associated protein"
FT                   /function="initiation of rolling circle replication"
FT                   /db_xref="GOA:Q8QME8"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QME8"
FT                   /protein_id="CAC94828.1"
FT                   /translation="MAPQGKRWCFTSFDSDPPFLSLPDGCSYLVYQREKCPQTDKEHWQ
FT                   GFITFVGQKRLNTVKSLAGGNNWHWEVARGKNTECRAYCTKEDTRVAPPVEFGQFTELG
FT                   SNKRKTMELFQEDPEELKIADPQKYRRCLAIITNQRFVDVALPTFDRQWQLEVGELLEQ
FT                   PADDRTIIWVYGSQGNEGKTTYVKGLIQKGWFNSRGGKSDDIMFQYIVHGGHAVFDFPR
FT                   DKEDYVNYNVLEAIKDRTCISNKYEPLSINSPSLVHVLVMANFMPQLEDEFDDKGRVVK
FT                   KQMLSVDRIKLIEC"
XX
SQ   Sequence 1360 BP; 457 A; 260 C; 284 G; 359 T; 0 other;
     acccaacctc tccacactca cctctccaca cctccgtaca ataaaaatcc atataaatgg        60
     ccccgcaggg taaacgctgg tgtttcactt cttttgactc tgatcctccg tttctctcac       120
     ttcccgatgg atgtagttac ttggtttacc aaagagaaaa atgtcctcag acagacaaag       180
     aacactggca gggtttcatc accttcgtcg gacagaagag acttaataca gttaagtctc       240
     ttgcaggagg aaacaattgg cactgggagg tcgctcgagg aaaaaataca gaatgcagag       300
     catactgtac aaaagaggat actcgagttg ctccacccgt cgaattcggt cagttcacag       360
     aacttgggtc gaataagagg aagacgatgg aactatttca ggaagaccca gaagaactca       420
     aaattgccga ccctcagaaa tatcgtcgat gcctggcaat tatcacaaat caaagattcg       480
     ttgatgttgc attgcctact ttcgatcgac aatggcagtt ggaggtcggg gaacttcttg       540
     agcagccagc agatgataga actatcattt gggtgtatgg aagccagggc aatgaaggaa       600
     agactacgta tgtgaaggga ctcatacaga agggatggtt caattcacgt ggtggcaagt       660
     ctgatgatat aatgttccag tacattgttc atggaggtca cgctgttttt gattttccta       720
     gagataaaga ggattatgtt aattataatg ttttagaagc tattaaggat cgtacatgta       780
     tttctaataa gtacgaacct cttagcatta attctccttc tcttgttcat gtcttagtta       840
     tggcgaactt catgcctcaa cttgaggatg agttcgatga taagggtaga gttgtaaaaa       900
     aacaaatgtt atccgtagac cggattaaat taatagaatg ttaattgtta attgttttat       960
     ttattattaa gaaagctata tacataaaaa gaaagaagaa agaaagaaga agaacacccc      1020
     cacaaaacac acacaaaaca cacagacaca tccaatcaag aaaaaaggaa gcgcagcgta      1080
     atgtctttaa tttgaaaaaa ttaatggaaa aaaagaaaaa gaaaaaagaa aaaaaaagga      1140
     gacatcagtg cataacgtca ctatcaaatg ttccccattt atcactataa atacgttagt      1200
     ccaaaaccgg gtgcgcaccc ggttttacaa taccacttac cagagtggta ttgtgtttct      1260
     cggtcctgtt ttaacaacag gatcgatgac gtggaattgc acacattctc tctctgttga      1320
     caggtttagc ctataataag ggagaggttg ggctagtatt                            1360
//