ID   AJ311373; SV 1; linear; genomic RNA; STD; VRL; 1567 BP.
XX
AC   AJ311373;
XX
DT   10-FEB-2003 (Rel. 74, Created)
DT   10-FEB-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Chinese narcissus potyvirus partial genomic RNA for viral polyprotein
DE   (ORF1), isolate Zhangzhou
XX
KW   coat protein; NIb protein; viral polyprotein.
XX
OS   Narcissus degeneration virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1567
RA   Adams M.J.;
RT   ;
RL   Submitted (22-MAY-2001) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, IACR-Rothamsted,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Chen J., Chen J., Langeveld S.A., Derks A.F.L.M., Adams M.J.;
RT   "Molecular characterization of carla- and potyviruses from Narcissus in
RT   China";
RL   J. Phytopathol. 151:26-29(2003).
XX
DR   MD5; da764802292c97e405a1e1ed5bbf6a34.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1567
FT                   /organism="Narcissus degeneration virus"
FT                   /host="Narcissus sp."
FT                   /isolate="Zhangzhou"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Fujian"
FT                   /db_xref="taxon:394036"
FT   CDS             <1..1419
FT                   /codon_start=1
FT                   /product="Polyprotein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q80P33"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P33"
FT                   /protein_id="CAC85380.1"
FT                   /translation="GNNSGQPSTVVDNTLMVMLAMQYSLLKCGIEFDRQNEFIIYFCNG
FT                   DDLIIAVEPSKAYILDSFEVYFKQLGLSYDFGNRVTEIEGLSFMSHAGKKVEDVYVPKL
FT                   DKERIVAILEWDRSVEPVSRLEAIVAAMVESWGYDDLISEIRKFYTWVLEQAPYKQLAE
FT                   EGKAPYLADTALRRLYLDVQATDEELEKYHTYYMSLNEPDIIQRVSFQSGEELDAARQI
FT                   PSKNKQQLVPTNSDKDVESSSTGKFIIPKFKGMSSKMKFPKFKNSVAFNPDHLLIYAPD
FT                   YLDLSNTRSTQQQFDNWYERVMQAYDSDEEGMKLILNGLIVWCIENGTSMNPQGTWVMM
FT                   DGNTQIEYPISPLLENAQPTFRQIMMHTSDLAEAYIEMRNRTERYMPRYGLQRNLRDYS
FT                   AARIAFDFYAVKSSTSTKLREAHIQMKAAAVKGMSNHLFGLDAKIGSDEEDTERHTSTD
FT                   VRRNMHSMQGARFM"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT                   /note="ORF1"
FT   mat_peptide     634..1416
FT                   /product="Coat protein"
FT                   /note="ORF1"
FT   3'UTR           1420..1567
FT                   /note="ORF1"
XX
SQ   Sequence 1567 BP; 490 A; 275 C; 382 G; 420 T; 0 other;
     ggcaataata gcgggcagcc ttcgacggta gttgataata cgcttatggt gatgttggcg        60
     atgcaatact cattactcaa gtgtgggatt gaattcgata ggcagaacga gtttataata       120
     tatttctgca atggtgatga tctgatcatt gctgttgaac ctagcaaagc gtatatactc       180
     gactcgtttg aagtctattt caaacaactc ggtttgagct acgattttgg aaatagggtg       240
     acggaaattg aaggacttag ctttatgtca catgctggaa agaaagtgga ggatgtttat       300
     gtgccaaagc tagacaagga aagaatcgtc gctatattgg aatgggatag gagcgtggaa       360
     ccagttagcc gacttgaagc aatcgtcgcg gcaatggttg agtcgtgggg ctacgatgat       420
     ttgataagcg aaatcagaaa gttttacact tgggttctgg agcaagctcc atataaacag       480
     cttgcggagg aaggaaaggc tccttatcta gcagatacag cgttgagacg gctatatctg       540
     gatgttcaag cgacagacga agaattggag aagtatcaca cgtactacat gtcgttaaat       600
     gaaccagata tcattcaacg agtttcgttt caatccggag aggagcttga tgcagcgcgg       660
     caaatcccaa gtaaaaacaa acaacaattg gttcccacga atagtgacaa ggatgtggaa       720
     tcgtcatcta ctggaaaatt tataatcccg aagttcaaag gtatgagttc caagatgaag       780
     tttccaaagt ttaagaatag cgtggctttt aaccccgatc acctacttat atatgctcca       840
     gattatctag atttgtcaaa tacaagatca actcaacaac aatttgacaa ctggtacgag       900
     agagtcatgc aagcatatga tagcgatgag gagggcatga agttaatttt aaacggtttg       960
     attgtttggt gtattgaaaa tggcacgtcg atgaatcccc aaggaacatg ggtaatgatg      1020
     gatggtaaca cgcaaattga atatccaatc tctccactgc tggagaatgc ccaaccaacg      1080
     ttccgacaaa ttatgatgca cacaagtgac ttagcggagg cgtatatcga gatgagaaat      1140
     cgaactgaaa ggtatatgcc acgttacggg cttcaaagaa acttgagaga ttacagtgca      1200
     gctcgtattg catttgactt ctatgcagtt aaatcaagta cgagtacaaa attaagagaa      1260
     gcccacatac aaatgaaagc cgcagctgtc aaaggaatgt ctaatcattt atttggctta      1320
     gatgcgaaga ttgggagtga cgaagaggac acggaaaggc atacatcgac cgatgtgcgt      1380
     cggaatatgc actcaatgca gggtgcgcgt tttatgtagt tccgttattt atatcttttc      1440
     cctgcttacg gtgaagtaca agtttaggga gtacccttag tacgtataag tgtaagcgtc      1500
     gtatatgtta tatactcggc tttcagtgtg tccttgacac gtgtctagta tatttcatgt      1560
     aagagac                                                                1567
//