ID   AJ310112; SV 1; linear; genomic RNA; STD; VRL; 1915 BP.
XX
AC   AJ310112;
XX
DT   06-FEB-2002 (Rel. 70, Created)
DT   03-JUN-2002 (Rel. 72, Last updated, Version 2)
XX
DE   Sugarcane mosaic virus partial genomic RNA for polyprotein gene, isolate
DE   Dongyang
XX
KW   CI protein; polyprotein.
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1915
RA   Adams M.J.;
RT   ;
RL   Submitted (13-MAR-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-001-0799-6.
RX   PUBMED; 12111432.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of potyviruses from sugarcane and maize in China";
RL   Arch. Virol. 147(6):1237-1246(2002).
XX
DR   MD5; e3092996a22f911fbc13de8dae94c53e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1915
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="maize"
FT                   /isolate="Dongyang"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..>1915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q8QXM4"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR011492"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QXM4"
FT                   /protein_id="CAC84101.1"
FT                   /translation="SVDVDEPLTLSTDKNLTIDFDTNQDLPADTFSNDVTFEDWWANQI
FT                   NNNRTVPHYRLGGKFVEFTRENAAMVSIELAHSNIEKEFLLRGAVGSGKSTGLPYHLSM
FT                   RGKVLLIEPTRPLAENVCRQLQGPPFNVSPTLQMRGLSTFGCTPITIMTSGFALHMYAN
FT                   NPDKISEYDFIIFDECHIMEAPAMAFYCLLKEYEYRGKIIKVSATPPGRECEFSTQHPV
FT                   DIHVCESLTQQQFVMELGTGSTADATKYGNNILVYVASYNDVDSLSHALTELKYSVIKV
FT                   DGRTMKQNTTGIVTNGTSSKKCFVVATNIIENGVTLDVDVVVDFGLKVTAELDVDNRAI
FT                   MYKRVSISYGERIQRLGRVGRNKPGTVIRIGKTMKGLQEIPAMIATEAAFMCFAYGLKV
FT                   ITHNVSTTHLAKCTVKQARTMMQFELSPFVMADLVKFDGSMHPQIHEALTKYKLRDSVI
FT                   MLRPNAIPKVNLHNWLTARDYNRIGCSLDLEDHVKIPYYIRGVPDKLYGKLYEIILQYS
FT                   PTSCYGRLSSACAGKVAYTLRTDPCSLPRTIAIINALITEEYAKRDHYRNMIANPSSSH
FT                   AFSLNGLVSMIASRYMKDHTKENIDKLVRVRDQLLEFQGTGMQFQDPSELMDIGALNTV
FT                   IHQ"
FT   mat_peptide     1..1914
FT                   /product="CI protein"
XX
SQ   Sequence 1915 BP; 636 A; 381 C; 404 G; 494 T; 0 other;
     agtgttgatg ttgatgaacc attgacacta agtactgata agaacctgac tatagatttt        60
     gatacaaatc aagacttgcc agcggataca tttagtaatg acgttacatt tgaggattgg       120
     tgggctaatc agattaacaa caacagaaca gtgccacact accgacttgg gggaaaattt       180
     gtagaattca caagagaaaa tgcagcaatg gtcagcattg aactcgctca ctcaaacatt       240
     gaaaaagaat tcttactcag aggagctgtt gggtcaggaa aatccacagg cttaccatac       300
     cacctcagta tgcgtggaaa agtgctattg atagaaccca ctcgaccatt agctgaaaac       360
     gtttgcaggc aattgcaagg acctccattt aacgtgagcc ccactttaca aatgcgaggt       420
     ttgagcacat ttggctgcac tcccatcacg ataatgacgt ctggattcgc attgcatatg       480
     tatgctaaca accctgacaa gatctctgaa tatgacttca tcatttttga tgaatgtcat       540
     atcatggaag cacctgcaat ggcattctat tgtttgctta aggagtacga ataccgagga       600
     aagataataa aagtttcagc aacaccacca ggacgagaat gtgagttttc aacccaacat       660
     ccagtggata tacatgtatg tgagagcttg acacaacagc aattcgtcat ggagcttgga       720
     acagggtcaa ccgctgatgc aaccaagtac ggtaataaca tattagtgta cgttgcaagt       780
     tacaatgacg tagattcttt atcccatgct ctaactgagc tcaagtattc agtaatcaaa       840
     gttgatggaa gaacaatgaa gcagaacacc acaggaattg taactaatgg aacatccagt       900
     aagaaatgct tcgttgtagc tacaaacatc attgagaatg gtgtgacgct agacgttgat       960
     gtcgttgtcg actttggact taaagtaaca gccgaactgg atgttgataa cagggcaata      1020
     atgtataaac gtgtgagcat atcttatggc gagcgtattc agagacttgg aagagttgga      1080
     aggaacaagc ccggaacagt tatccgcatc gggaaaacaa tgaaaggttt gcaagaaatt      1140
     ccagcgatga tcgccactga agcggctttc atgtgtttcg catatggact gaaggtcata      1200
     acgcacaatg tatcaacaac acatttggca aaatgcaccg ttaaacaagc cagaactatg      1260
     atgcagtttg agctttcacc atttgtaatg gccgatctag taaagtttga tggttctatg      1320
     cacccacaaa tccatgaagc attaactaag tataaattac gagattctgt aattatgcta      1380
     agaccaaacg caataccaaa ggtaaatctt cacaattggt taacggctcg tgattacaac      1440
     agaataggct gctcattaga ccttgaagat catgttaaaa taccatatta catacgagga      1500
     gttcctgaca agttgtacgg gaagttgtat gaaattatcc ttcaatacag ccctacaagt      1560
     tgctatggaa gactatcaag cgcttgtgca ggtaaggtag catatacact gcgcactgat      1620
     ccttgttcgt taccaagaac aatagctata atcaacgcat taatcactga agagtatgca      1680
     aagagggatc attacagaaa catgatagcg aacccttcgt catcgcacgc cttttcactt      1740
     aatgggctgg tatccatgat cgcttctcga tacatgaaag atcacacgaa ggaaaacatt      1800
     gataaacttg taagagtgcg cgaccagcta cttgaattcc aaggcacagg tatgcaattt      1860
     caagatcctt cagaattgat ggacattggt gctttaaaca cagttattca ccaag           1915
//