ID   AJ309508; SV 1; linear; genomic RNA; STD; VRL; 1382 BP.
XX
AC   AJ309508;
XX
DT   30-JAN-2001 (Rel. 66, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate
DE   sp-l
XX
KW   coat protein; cp gene; movement protein; p7 gene; P9 gene.
XX
OS   Carnation mottle virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus.
XX
RN   [1]
RP   1-1382
RA   Pallas V.;
RT   ;
RL   Submitted (29-JAN-2001) to the INSDC.
RL   Pallas V., Biologia del estres, Instituto de Biologia Molecular y Celular
RL   de Plantas-CSIC, Avenida de los Naranjos s/n, 46022 Valencia, SPAIN.
XX
RN   [4]
RX   DOI; 10.1007/s007050170051.
RX   PUBMED; 11722023.
RA   Canizares M.C., Marcos J.F., Pallas V.;
RT   "Molecular variability of twenty-one geographically distinct isolates of
RT   Carnation mottle virus (CarMV) and phylogenetic relationships within the
RT   Tombusviridae family";
RL   Arch. Virol. 146(10):2039-2051(2001).
XX
DR   MD5; 5c8c3f99c80ee033c9ad3e66b67495f4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1382
FT                   /organism="Carnation mottle virus"
FT                   /variety="Lord"
FT                   /isolate="sp-l"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /db_xref="taxon:11986"
FT   CDS             1..186
FT                   /gene="p7"
FT                   /product="movement protein"
FT                   /note="The central region contains an RNA-binding motif"
FT                   /db_xref="GOA:Q98VN0"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:Q98VN0"
FT                   /protein_id="CAC27501.1"
FT                   /translation="MDIEPEVSVVGKQTLAGNRGKQKTRRSVAKDAIRKPASDSTNGGN
FT                   WVNVADKIEVHIHFNF"
FT   CDS             92..346
FT                   /gene="p9"
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q98VK4"
FT                   /db_xref="UniProtKB/TrEMBL:Q98VK4"
FT                   /protein_id="CAC27502.1"
FT                   /translation="MPSANLHLIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIIAL
FT                   SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGK"
FT   CDS             336..1382
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q999Z5"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR013669"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q999Z5"
FT                   /protein_id="CAC27503.1"
FT                   /translation="MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNHKRRAE
FT                   MLAGYTPAILAFTPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSF
FT                   EDWVVSPRNVSVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTP
FT                   PTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFD
FT                   KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK
FT                   WCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAICELVTQMEGQILKITKTSAEQP
FT                   LQWVVYRM"
XX
SQ   Sequence 1382 BP; 403 A; 316 C; 355 G; 308 T; 0 other;
     atggatattg aaccggaagt atcagtagtt ggaaagcaaa cgctcgctgg gaatagagga        60
     aaacagaaga cacgtagatc ggtggccaag gatgccatcc gcaaacctgc atctgatagt       120
     actaacgggg gtaattgggt taatgttgct gataagattg aggtgcacat tcacttcaac       180
     ttttagtttg cccccactgg taactttaaa tcagataata gcgttgtcat tttgtggtct       240
     tctattaaac agcatctctc gggcagaaag agcttgctat tacaactact ctgttgatag       300
     ttctaaacaa caacacattt cgataagtac accaaatgga aaataaagga gaaaagatcg       360
     cgatgaatcc cactgtgcaa acgttggcgc agaaggggga caagttagcc gtaaagttgg       420
     tgacaagagg gtgggcctct ctgagtacga accataagag gagagctgaa atgcttgctg       480
     gatacactcc agcgatccta gccttcacac cccgacgacc acggatgacg aaccctcctc       540
     caagaaccag taggaattca ccaggacaag ctggaaagtc catgacgatg agtaagaccg       600
     aactactaag caccgtcaaa ggtaccacag gtgttatccc aagctttgaa gactgggtcg       660
     tttccccccg aaacgtatcc gtcttccctc aactctcgct gctggcgacg aacttcaaca       720
     agtaccgcat tactgcgctc actgtgaagt actcacccgc gtgcagcttc gagaccaatg       780
     ggagggtggc tctgggattc aacgatgacg cttcggacac accaccaacc accaaggttg       840
     ggttttacga tctgggcaaa catgtggaaa ctgctgcaca gacagctaag gatctagtga       900
     taccagtaga cggcaaaacc cggttcatca gggattcggc tagtgatgat gccaaactag       960
     tcgattttgg gcgaatagtc ttgtcaacat acgggtttga caaggctgac actgtggtgg      1020
     gcgaattgtt tatacagtac acgatcgtgc tgagtgaccc aaccaagacg gccaaaattt      1080
     cacaggcaag caacgataag gtgtcggacg gaccaacgta tgtggtccct tcggttaatg      1140
     gcaacgagct acaactaaga gtggtagccg ctgggaagtg gtgcattata gtgcggggta      1200
     cggttgaggg tggcttcacc aaacccacac ttattgggcc cggaatcagc ggtgatgtgg      1260
     actatgaaag tgccagacct atcgccattt gtgaattggt gacacaaatg gagggccaga      1320
     tattgaaaat caccaagacc tcagcagaac aaccactcca atgggttgtt tataggatgt      1380
     ga                                                                     1382
//