ID   AJ309495; SV 1; linear; genomic RNA; STD; VRL; 1382 BP.
XX
AC   AJ309495;
XX
DT   30-JAN-2001 (Rel. 66, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate
DE   jap
XX
KW   coat protein; cp gene; movement protein; p7 gene; P9 gene.
XX
OS   Carnation mottle virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus.
XX
RN   [1]
RP   1-1382
RA   Pallas V.;
RT   ;
RL   Submitted (26-JAN-2001) to the INSDC.
RL   Pallas V., Biologia del estres, Instituto de Biologia Molecular y Celular
RL   de Plantas-CSIC, Avenida de los Naranjos s/n, 46022 Valencia, SPAIN.
XX
RN   [4]
RX   DOI; 10.1007/s007050170051.
RX   PUBMED; 11722023.
RA   Canizares M.C., Marcos J.F., Pallas V.;
RT   "Molecular variability of twenty-one geographically distinct isolates of
RT   Carnation mottle virus (CarMV) and phylogenetic relationships within the
RT   Tombusviridae family";
RL   Arch. Virol. 146(10):2039-2051(2001).
XX
DR   MD5; 39a69b8baf564c15131bba2f51d3e1e0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1382
FT                   /organism="Carnation mottle virus"
FT                   /isolate="jap"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan"
FT                   /db_xref="taxon:11986"
FT   CDS             1..186
FT                   /gene="p7"
FT                   /product="movement protein"
FT                   /note="The central region contains an RNA-binding motif"
FT                   /db_xref="GOA:Q98VP2"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:Q98VP2"
FT                   /protein_id="CAC27465.1"
FT                   /translation="MDIEPEVPVVGKQMLAGNRGKQKTRRSVAKDAIRKPASDSTNGGN
FT                   WVNVADKIEVHIHFNF"
FT   CDS             92..346
FT                   /gene="p9"
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q99A11"
FT                   /db_xref="UniProtKB/TrEMBL:Q99A11"
FT                   /protein_id="CAC27466.1"
FT                   /translation="MPSVNLHPIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIIAL
FT                   SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGK"
FT   CDS             336..1382
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q98VK0"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR013669"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q98VK0"
FT                   /protein_id="CAC27467.1"
FT                   /translation="MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAE
FT                   MLAGYTPAILAFTPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSF
FT                   EDWVVSPRNVAVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTP
FT                   ATTKVGFYDLGKHVETAAQTGKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFD
FT                   KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK
FT                   WCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAVCELVTQMEGQILNITKTSAEQP
FT                   LQWVVYRM"
XX
SQ   Sequence 1382 BP; 401 A; 316 C; 359 G; 306 T; 0 other;
     atggatattg aaccggaagt accagtagtt ggaaagcaaa tgctcgctgg gaatagagga        60
     aaacaaaaga cacgtagatc ggtggccaag gatgccatcc gtaaacctgc atccgatagt       120
     actaacgggg gtaattgggt taatgttgct gataagattg aggtgcacat tcacttcaac       180
     ttttagtttg cccccactgg taactctaaa tcagataata gcgttgtcat tttgtggtct       240
     tctattaaac agcatctctc gggcagaaag agcttgctat tacaactact ctgttgatag       300
     ctccaaacaa caacacattt cgataagtac accaaatgga aaataaagga gaaaagatcg       360
     cgatgaatcc cactgtgcaa acattggcgc agaaggggga caagttggcc gtgaagttgg       420
     tgacaagagg gtgggcctct ctgagtacga accagaagag gagagctgaa atgcttgctg       480
     gatacactcc agcgatccta gcctttacac cccgacgacc acggatgaca aaccctcctc       540
     caagaaccag taggaattca ccaggacaag ctggaaagtc catgacgatg agtaagaccg       600
     aattattaag caccgtcaag ggtaccacgg gtgttatccc aagctttgaa gactgggtcg       660
     tttccccccg aaacgtagcc gtcttccctc aactctcgct gctggcgacg aacttcaaca       720
     agtaccgcat tactgcgctc actgtgaagt actcacccgc gtgcagcttc gagaccaatg       780
     ggagggtggc tctgggattc aacgatgacg cttcggacac accggcaacc accaaggttg       840
     gtttttacga tctgggtaaa catgtggaga ctgctgcaca gacaggcaaa gatctagtga       900
     taccagtcga cggcaaaacc cggttcatca gggactcggc tagtgatgat gccaaactag       960
     tcgattttgg acgaatagtc ttgtcaacat acgggtttga caaggctgac actgtggtgg      1020
     gcgaattgtt tatacagtac acgattgtgc tgagtgaccc aaccaagacg gccaaaattt      1080
     cacaggcaag caacgataag gtgtcggacg gaccaacgta tgtggtccct tcggttaatg      1140
     gcaacgagct acaactaaga gtggtagccg ctgggaaatg gtgcatcata gtgcggggta      1200
     cggttgaggg aggcttcacc aaacccacac ttattgggcc aggcatcagc ggtgatgtgg      1260
     actatgaaag tgccagacct atcgccgttt gtgaattggt gacacaaatg gagggccaga      1320
     tattgaatat caccaagacc tcagcagaac aaccactcca atgggttgtt tataggatgt      1380
     ga                                                                     1382
//