ID AJ304989; SV 1; linear; genomic RNA; STD; VRL; 4002 BP. XX AC AJ304989; XX DT 16-JAN-2001 (Rel. 66, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Carnation mottle virus p27 gene, p7 gene, p9 gene and CP gene, genomic RNA XX KW coat protein; cp gene; movement protein; p27 gene; p7 gene; P9 gene; KW RNA polymerase. XX OS Carnation mottle virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus. XX RN [1] RP 1-4002 RA Pallas V.; RT ; RL Submitted (11-JAN-2001) to the INSDC. RL Pallas V., Biologia del estres, Instituto de Biologia Molecular y Celular RL de Plantas-CSIC, Avenida de los Naranjos s/n, 46022 Valencia, SPAIN. XX RN [2] RX DOI; 10.1074/jbc.M100706200. RX PUBMED; 11279121. RA Vilar M., Esteve V., Pallas V., Marco J.F., Perez-Paya E.; RT "Structural properties of carnation mottle virus p7 movement protein and RT its RNA-binding domain"; RL J Biol Chem 276(21):18122-18129(2001). XX DR MD5; b2d172d8786e2d884ed59d3ba979fb1f. XX FH Key Location/Qualifiers FH FT source 1..4002 FT /organism="Carnation mottle virus" FT /isolate="Dixie" FT /mol_type="genomic RNA" FT /db_xref="taxon:11986" FT CDS 69..806 FT /gene="p27" FT /product="RNA polymerase" FT /db_xref="GOA:Q9DJV5" FT /db_xref="UniProtKB/TrEMBL:Q9DJV5" FT /protein_id="CAC22322.1" FT /translation="MGLPSLLVEGVIGCTLVGGLVAVGSAALAVRATIGVVEFNRECVR FT GARRIVSSGGRCLIVQSPYGNPNQGLIRGEDEEIDNVEESTPEELTQLIEVKAEVDGKE FT VVVSKKRVVNRHLRQRFVRSIAIEAKNHFGGDISPSKANYLSVSKFLTGKCKERHVVPA FT HTRDCVSAAMVLVFTPDVHEIRMMAGLASDAAYGRKIAMASILNRKGWCWRLMVNPLDR FT ARWWEMWCVVNGFDSNKPVTFPK" FT CDS 2333..2518 FT /gene="p7" FT /product="movement protein" FT /note="The central region contains an RNA-binding motif" FT /db_xref="GOA:Q9DJV4" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q9DJV4" FT /protein_id="CAC22323.1" FT /translation="MDIESEVPVVEKQMLAGNRGKQKTRRSVAKDAIRKPASDSTNGGN FT WVNVADKIEVHIHFNF" FT CDS 2424..2678 FT /gene="p9" FT /product="movement protein" FT /db_xref="GOA:Q9DJV3" FT /db_xref="UniProtKB/TrEMBL:Q9DJV3" FT /protein_id="CAC22324.1" FT /translation="MPSVNLHLIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIIAL FT SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGK" FT CDS 2668..3714 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q9DJV2" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR013669" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9DJV2" FT /protein_id="CAC22325.1" FT /translation="MENKGERIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAE FT MLAGYTPAILAFTPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSF FT EDWVVSPRNVAVFPQLSLLAMNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTP FT PTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSTSDDAKLVDFGRIVLSTYGFD FT KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK FT WCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAICELVTQMEGQILKINKTSAEQP FT LQWVVYRM" XX SQ Sequence 4002 BP; 1134 A; 865 C; 1087 G; 916 T; 0 other; gggtaagctg gcgggcaaac ctatctctat cttcattaca ttatatattc taaccatctg 60 ctttcactat gggattaccc agtctactag tggaaggcgt tattggatgc actctagtcg 120 gtggtttggt ggctgtgggt agcgcagcgc tggccgttcg ggcgaccatc ggtgttgtag 180 aattcaatag ggagtgtgtg cgcggggcga gaaggatcgt atctagcgga ggaaggtgct 240 tgatagtcca atccccttat ggtaatccta accaaggatt gataagaggc gaggacgaag 300 aaattgacaa tgtggaggag tcaacaccgg aggaattgac tcagttgatt gaggtcaagg 360 cggaagtgga tgggaaagag gtggtcgtct ccaagaagcg tgtagtaaac aggcacttga 420 gacaacgatt cgttcgctcc atagccatcg aagccaaaaa tcactttggt ggcgacatca 480 gccctagcaa ggccaactat ctttccgttt ccaagttttt aacggggaaa tgcaaggaaa 540 gacatgttgt gcccgctcac actagagatt gtgtgagtgc agctatggtg ctggtattca 600 cccccgacgt ccacgagatc aggatgatgg caggattggc gtctgacgca gcgtacggaa 660 gaaagatcgc aatggcaagc atactgaaca ggaaaggatg gtgttggagg ctaatggtaa 720 atccattaga tagggcaaga tggtgggaaa tgtggtgcgt tgtaaacggg tttgactcca 780 acaaacccgt cacctttccc aaataggggg gcctgttcta cctcaatggt gtggagacga 840 aaattcgtcg tggaggccac ccatcagtga ttgaggtaga cgggcaatgt cctcccaaag 900 agagaaaact ctacgtacag aatgccataa ccactggtta tgaatacagg gtccacaacc 960 attcgtacgc aaacctcaga agagggctcc ttgagagagt tttctatgtt gagcgcaaca 1020 aggagctagt cagctgtccg caacctgaac ccggcagctt taaagagatg ggatacctgc 1080 gacgcaggtt ccatagagtg tgtggcaatc attcccggat ctctgccaat gatttggtag 1140 attgttatca gggcaggaaa cgcacaatct atgagaatgc agcagcgtcc ctactcgata 1200 gagctatcga aaggaaggat ggcgatctta aaacctttat caaggcggag aaattcaacg 1260 tgaatctgaa aagtgatcct gctcctcggg ttatacagcc taggagccct cgctacaatg 1320 tggagttggg ccggtactta aagaagtatg aacaccatgc ttacaaagcc ttagacaaga 1380 tctggggagg accaacagtc atgaaaggat acactacaga ggaggtagca cagcacattt 1440 ggagcgcatg gaatcaattc cagacacctg tagccatagg atttgacatg tcaagattcg 1500 atcagcacgt gtctgtagcc gcgctcgagt tcgaacattc atgctatttg gcctgttttg 1560 aaggggacgc tcatctcgcc aacttgctta agatgcaact ggtgaatcat ggcgtgggtt 1620 ttgcgagcaa tggaacgttg cgatacacaa aggaagggtg tagaatgagc ggcgacatga 1680 acactgcctt gggcaactgt ttgttagcct gtcttatcac caaacactta atgaaaatca 1740 ggagcagact gatcaacaat ggggatgact gcgtgcttat ttgcgaaaga acagacatcg 1800 actacgtcgt gagtaattta acgacgggat ggagtcgatt tggtttcaat tgcatagcag 1860 aagagccagt gtacgaaatg gaaaagatca ggttctgcca gatggcaccg gtgtttgatg 1920 gagcaggctg gctgatggtc agggacccct tggtgagcat gagcaaggat tctcactcct 1980 tagtgcattg gaacaacgaa acgaacgcaa gacaatggct gaagtcagta ggaatgtgcg 2040 gtctgcggat tgccgggggg gttccagttg tgcaagagtt ctaccagaaa tacgttgaaa 2100 cagccggaaa tgtgaaagag aacaaaaata tcacagagaa gagcagttct gggttcttta 2160 tgatggcgga tcgcgctaag cggggctatt ctgctgtgtc tgaggagtgt cgatttagct 2220 tctaccaggc attcggcatc acgccagacc agcagatcgc gttggagggg gagatcaggt 2280 ctctcactat taacaccaac gtggggcccc agtgtgaagc ggcagattca ctatggatat 2340 tgaatcggaa gtaccagtag ttgaaaagca aatgctcgct gggaacagag gaaaacaaaa 2400 gacacgtaga tcggtggcca aggatgccat ccgtaaacct gcatctgata gtactaacgg 2460 gggtaattgg gttaatgttg ctgataagat tgaggtgcac attcacttca acttttagtt 2520 tgcccccact ggtaacttta aatcagataa tagcgttgtc attttgtggt cttctgttaa 2580 acagcatctc tcgggcagaa agagcgtgct attacaacta ctctgttgat agttctaaac 2640 aacaacacat ttcgataagt acaccaaatg gaaaataaag gagaaaggat cgcgatgaat 2700 cccactgtgc aaacattggc gcagaagggg gacaagttag ccgtgaagtt ggtgacaaga 2760 ggatgggcct ctctgagtac gaaccagaag aggagagctg aaatgcttgc tggatacact 2820 ccagcgatcc tagccttcac cccccgacga ccacggatga cgaaccctcc tccaagaacc 2880 agtaggaatt caccaggaca agctggaaag tccatgacga tgagtaagac cgaactatta 2940 agcaccgtca aaggtaccac gggtgttatc ccaagctttg aagactgggt cgtttccccc 3000 cgaaacgtag ccgtcttccc tcaactctcg ctgctagcga tgaacttcaa caagtaccgc 3060 attactgcgc tcactgtgaa gtactcaccc gcgtgcagct tcgagaccaa tgggagggtg 3120 gctctgggat tcaacgatga cgcttcggac acaccaccaa ccaccaaggt tggattttac 3180 gatctgggca aacatgtgga aactgctgca cagacagcta aggatctagt gataccagta 3240 gacggcaaaa cccggttcat cagggactcg actagtgatg atgccaaact agtcgatttt 3300 ggacgaatag tcttgtcaac atacgggttt gacaaggctg acactgtggt gggcgaattg 3360 tttatacagt acacgattgt gctgagtgac ccaaccaaga cggccaaaat ttcacaggca 3420 agcaacgata aggtgtcgga cggaccaacg tatgtggtcc cttcggtcaa tggcaacgag 3480 ctacaactaa gagtggtagc agctgggaaa tggtgcatta tagtgcgggg tacggttgag 3540 ggaggcttca ccaaacccac acttattggg ccaggaatca gcggtgatgt ggactatgaa 3600 agtgccagac ctatcgccat ttgtgaattg gtgacacaaa tggagggcca gatattgaaa 3660 atcaacaaaa cctcagcaga acaaccactc caatgggttg tttataggat gtgaatgcaa 3720 cagaaaagtt tgttagacac acacggcggg acgtgttgct ggagctgcca ctccgcccaa 3780 gatggatcga tattaaccat ctttggcaac agcgtgcgtg actaattgaa cctagtaatt 3840 gcatagcatt cgactgtaac ctgttctctg ctgaacgcga gggtggcctc gtgatcccaa 3900 accataaaag aaaccaactt gttggtggaa gggcttggaa gtaggatcaa ccactgttta 3960 ttaattaggg gtgggagtat tcactgtact ctttccccgc cc 4002 //