ID   AJ292223; SV 1; linear; genomic RNA; STD; VRL; 1625 BP.
XX
AC   AJ292223;
XX
DT   06-FEB-2002 (Rel. 70, Created)
DT   06-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Onion yellow dwarf virus partial genomic RNA for polyprotein gene, isolate
DE   YH2
XX
KW   coat protein; NIb polymerase; polyprotein.
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1625
RA   Adams M.J.;
RT   ;
RL   Submitted (24-JAN-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s007050170037.
RX   PUBMED; 11722009.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Molecular characterisation of a complex mixture of viruses in garlic with
RT   mosaic symptoms in China";
RL   Arch. Virol. 146(10):1841-1853(2001).
XX
DR   MD5; e48a9249bf83bbe7ba094a7c40bfc38b.
DR   EuropePMC; PMC3725790; 23935432.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1625
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="garlic"
FT                   /isolate="YH2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1410
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q8QXP3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QXP3"
FT                   /protein_id="CAC83685.1"
FT                   /translation="GNNSGQPSTVVDNTIMVMLSVQYALRKCGIAVDKQTEVIKYFCNG
FT                   DDLLIAIHPDYEDTLDRFQQYFHELGLDYDFSSRSRSKEDVYFMSHRGLLRDGIYIPKL
FT                   DKERVASILEWDRADKPEHRLEAICAAMIEAWGYPDLLYEIRKFYQWLLDQAPYNVIAQ
FT                   NGKAPYIAETALKKLFTNIDASEVELEKYYEVYMNLENEEVISKEVRYQAGEGEDAAAQ
FT                   ASTSQQVSKHKDKDVDTGTTGKFVIPRIKAMSDKMRFPRVGKTVVLNAEHLLAYKPEQI
FT                   ELYNTRSTKQQFENWYNAVKKDYDVDDDQMKILLNGLMVWCIENGTSPNLSGNWTMMDG
FT                   DEQVEYPLAPIVDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNITELSLA
FT                   RYAFDFYEMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADIN
FT                   KNQHTLLGIKM"
FT   mat_peptide     <1..636
FT                   /product="NIb polymerase"
FT   mat_peptide     637..1407
FT                   /product="coat protein"
XX
SQ   Sequence 1625 BP; 547 A; 282 C; 385 G; 411 T; 0 other;
     gggaacaaca gtgggcagcc gtccaccgtt gttgataaca caattatggt aatgttgagc        60
     gtacaatacg ctttgcgtaa gtgtggcata gcagtagata agcaaaccga agttatcaaa       120
     tatttctgca atggcgacga tttactaatt gcaatacatc cagactacga agacacactt       180
     gatagatttc aacagtattt tcacgaactt ggcctagatt atgacttctc aagtcggagt       240
     agatcaaaag aggatgtgta ttttatgtcg cacaggggat tactcagaga cgggatttat       300
     ataccgaagt tagataaaga acgtgtagcc tcaatacttg aatgggatcg agcggacaag       360
     cccgaacatc ggttggaggc tatatgtgca gctatgatcg aagcgtgggg ttacccagac       420
     ctcttatatg aaatccggaa gttctatcaa tggcttttag accaagctcc atataatgta       480
     atagctcaga acggaaaagc accgtacata gcagaaacag ctctcaagaa gttattcacc       540
     aacattgatg cgagtgaggt agaactagag aaatactatg aggtgtatat gaatctagag       600
     aacgaagaag taatttctaa ggaggttcgc tatcaagcag gggaagggga ggacgcagcg       660
     gcacaagcaa gtacgtcaca acaggtctca aagcacaagg ataaagatgt ggatactggc       720
     actacaggca agtttgtgat tcctagaatt aaagcgatgt ctgacaaaat gagattccca       780
     agggttggca aaaccgttgt acttaacgca gaacacctgt tggcatacaa gccagaacaa       840
     attgaattgt ataacacaag atcgacaaag caacaatttg aaaactggta caatgcagtt       900
     aagaaagatt acgatgtcga cgatgatcag atgaaaattt tgctaaatgg tttaatggtt       960
     tggtgcattg agaatgggac gtctcctaat ctatcaggaa actggactat gatggatggt      1020
     gatgaacaag tagaataccc attagcgccg attgtagata atgcaaaacc aacatttaga      1080
     cagataatgg cgcatttcag tgatgcagct gaagcataca ttgaatatag aaacgctaca      1140
     gagaaatata tgccccgata tggacttcag cgaaatataa cagaacttag tttggcacgt      1200
     tacgcattcg acttttatga gatgacttcg aagactccta aacgggcgaa ggaagcacac      1260
     atgcaaatga aggcggctgc ggttagaggg gcaactaacc gtttgtttgg cctggatggt      1320
     aacgtaaaca caacagaaga ggacacggaa agacacacag ctgcggatat taataagaac      1380
     cagcatacat tgcttggtat taaaatgtga aaccgtgttg gtgtctttag ttttatatat      1440
     ttatatagtt atataaaaac gtatgtaata tgtaatcctt ttcatttcgt ttaatctgac      1500
     ttcgagcaac gaaatgtggt gtaccactag ttgtggcgaa cgatacggtt aaacatctgt      1560
     aattaatgtc gaatttcatg agagtgatgt atcacggggt gaactttggc gtgaattacg      1620
     gagac                                                                  1625
//