ID AJ243438; SV 1; linear; genomic RNA; STD; VRL; 7545 BP. XX AC AJ243438; XX DT 29-JUN-1999 (Rel. 60, Created) DT 02-JUL-1999 (Rel. 60, Last updated, Version 2) XX DE Apple chlorotic leaf spot virus complete genomic RNA XX KW 216K protein; coat protein; complete genome. XX OS Apple chlorotic leaf spot virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-7545 RA Jelkmann W.; RT ; RL Submitted (27-JUN-1999) to the INSDC. RL Jelkmann W., Institute for Plant Protection in Fruit Crops, Fed. Biol. Res. RL Centre for Agriculture and Forestry, Schwabenheimer Str. 101, D-69221 RL Dossenheim, GERMANY. XX RN [2] RA Jelkmann W.; RT "The nucleotide sequence of a strain of apple chlorotic leafspot virus RT (ACLSV) responsible for plum pseudopox and its relation to an apple and RT plum bark split strain."; RL Phytopathology 86:101-101(1996). XX RN [3] RA Jelkmann W.; RT "The nucleotide sequence and genomic organization of a stain of apple RT chlorotic leafspot virus (ACLSV) responsible for plum pseudopox"; RL Unpublished. XX DR MD5; c0f69fefd6a283690c218591d1c7c808. DR EuropePMC; PMC4982687; 27519059. XX FH Key Location/Qualifiers FH FT source 1..7545 FT /organism="Apple chlorotic leaf spot virus" FT /strain="plum pseudopox" FT /isolate="PBM1" FT /mol_type="genomic RNA" FT /country="Germany" FT /db_xref="taxon:12175" FT CDS 152..5803 FT /product="216 K polyprotein" FT /note="ORF1" FT /db_xref="GOA:Q9WSQ7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008744" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q9WSQ7" FT /protein_id="CAB46073.1" FT /translation="MAFSYRTPQEELLSRLPQSQQEVISGFQYERIQKEEEKKVENLFF FT YLPEKTREWFTKSGVYLSPFAYVNHSHPGCKTLENHLLFNVVASYISKYSYVACLSIKS FT NKMSKMERLGSNSVKTYDILNRLVTVKGKGRYGPLAKPERSPCPKKTNIFIHDEIHYWS FT RDQLETFLQVHRPKNLWATLVFPPEILAGYKSSVLPFLYQFEIHGKDLVYMPDGVRSES FT YTQPLENGYLLSSSSILVRNKTTGVEMRYQVSLIYSLGSHHLFHIYPTEDLMKEEVRRF FT GPYDLFDVGSLFVKPVRVPIQDFPLSVFKKIFIYISSLKRPGVQSAVAKLRQLSDADIS FT IESVFMVQEFASRIEKDGVEKWSCSFWGCMKDWFFDKLPYREVLEKIGLADDFTRRLMK FT IKPLAFDIHTTDRPLTDRMVIDQIWEERQSSCDDIPNIVFYGRKEWIEHGVVPKIKKSL FT AKLIPGREMESSDYPKEIYSDLLSSTSIWRSYDDDLRHRNASPTVVLKSSRSYSEAAGF FT NSHCLSICATAHDEVVMKTPFELKREANKKELSMHCLNFHMKKMKVKSLPELEAKLNEH FT GKGIFRKKEGTRKVKRPRMVPVHLLKQVNDVKGDKINEETRRKPNPQPGKRRNEGEKDV FT SPHDEGFPVECTKTNAQSAQKFPTSSKLSDLIGKTQLSSRGLIKTVGNDYLALAEQIEC FT MPLSQLKNKKAAYFCLDFPMVYFHDRVSYPAFEATGEIRQVIMRARDKWGINFNSALIQ FT VYNDGCRLPLHSDNEECYDDDGILTINVKGDAKFHTTCHDEVIELKQGNEILMPAGYQK FT RNRHAVEVDSEGRTSVTLRVHKRDFSFESKLRFIKGKFDCLFVSIAEIIHKKPEEVMMF FT IPHIMDRCVSNKGCSLDDAKAICERYEIKIECEGDCGLVECGTSGLSVGRMLLRGNHFT FT VASVRRSSIDSLANSSKEIKSNGVLDHVTFNFHKRLKLVEPDLTMVDTKVDPSRAGKLL FT KSLMDGMTGIVSHNSTHEGWRMIKGINSTSEMRSFMSMIKGQCEDTKSDLFDKVQELNF FT MKVKIYGIFGFAGSGKSHAIQNLIQTEFKGSQGVMVICPRRFLAKDWSEKGVDEKDIKT FT LESALKSDIKGKRLFILDEVSLLPKGFTDLIMLKMHMEEILKKSTIVCIGDPLQAGYFC FT PKDDSYLSREGEIKRLFKDGVNYKWYSYRINKFVAKKLAIETMNDFIGIDEQSSIYKDM FT PSANHFMEKKGNHIEVILVASMVEKELYSNYGNVMTFGESQGLTFNCGVIVLSEEAKLC FT SDAHIMVAITRFRRGFCFALGSKGSKEDYMRSMKSGLLQRMCSGIGASKEFILGSSSVS FT LNLSEKDITRGAGVDEMDREARLEGDVWLKSMIYLGKRYHMIEPLGQVIKLTDSAIKCH FT IPVCSSQTLGPELDNIQAREFREFKGKNGWSNQFREEAGPNWRFPYKVNQAMSYEAVYP FT RHRMDDDLTFLAAIKKRLRFDNVANNYAKFKAAENRGKYLAKIFLKHVPIKCGRDQRLL FT DQCRQEFEETKLSKSAATIGAHSQRSDSDWPLDKIFLFMKSQLCTKFEKRFTEAKAGQT FT LACFPHKILVEFSPWCRYTEKVLSANLPDNYYIHQRKNFSELEDFAKRFSNGSVCVESD FT YTAFNVSQDHTILAFKVELLKHFGWDDSILQSYIKMKCTLGCRLGGFAIMRFTGEFSTF FT LFNTLANMVFTFCRYEVPDGTPICFAGDDMCALRNLREIDTHEFILNKLSLKAKVNRTR FT VPMFCGWRLCCDGLIKEPCLIYERLQVAIENGRLMDVIDSYFLEFSFAYKLGERLYSHL FT EIEQLNYHQVLTRFFIRNKHLLRGDSRHNISELEWLSDEDGDDDKGSQIEDRRRGYSNC FT WGEKLQNLF" FT CDS 5715..7097 FT /product="hypothetical protein" FT /note="ORF2" FT /db_xref="GOA:Q9WSQ6" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q9WSQ6" FT /protein_id="CAB46652.1" FT /translation="MATMIRGHKLKIAEGDIPIAGVKSSRIYSDVSPFKRASDLMIHWN FT EFVFKVMPEDIAGDGFRLASMPVIPSSEVQAVLRKRESTNYVHWGALSISIDALFRKNA FT GVSGWCYVYDNRWETFEQAMLQKFHFNLDSGSATLVTSPNFPVSLDDPGLSNSISVAVM FT FENLNFKLESYPISVRVGNMCRFFDSFLSSVKNKVDSNFLLEAANADPLGVGAFGFEQD FT DQVSELFNYIHTVPTQAIKSREHEIPKGLFGMLGKKKVKSFEFASGSRSMGRIKPYRGM FT QFERSSSQRIVPGFRSQDDKNEYQSLSTDSDFENFLKRKDKGKAGAKSIASEGSSIDNI FT SPREFQFARQNKKKEDGSSSELAAKGGRRSESIPGRRRQTPSWKDRGNPGTDTGVHLRE FT HSNPRNVGADGVSWTNGGGEVNGGSEGDRILQFEGGRQPDQGLQDYLFGPEYQQYDLPA FT GV" FT CDS 6610..7362 FT /product="hypothetical protein" FT /note="ORF3" FT /db_xref="GOA:Q9WSQ5" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q9WSQ5" FT /protein_id="CAB46653.1" FT /translation="MIKMNIKAYQLTVILKIFSKGRTKVKLGPNPLLQRGHPLTTYLQE FT SFSLLDKIRRRRMAAVLNLQLKVDADLKAFLGAEGRPLHGKTGVILEQILESIFANIAI FT QGTSEQTEFLGLTVEVKSMEDQKVIGSYNLREVVNLIKAFKITSSDQNINNMTFRQVCE FT AFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVITN FT MNRPLLQTEFAKSENEAKLSSVSTDLCI" FT CDS 6781..7362 FT /product="coat protein" FT /db_xref="GOA:Q9WSQ4" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:Q9WSQ4" FT /protein_id="CAB46654.1" FT /translation="MAAVLNLQLKVDADLKAFLGAEGRPLHGKTGVILEQILESIFANI FT AIQGTSEQTEFLGLTVEVKSMEDQKVIGSYNLREVVNLIKAFKITSSDQNINNMTFRQV FT CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI FT TNMNRPLLQTEFAKSENEAKLSSVSTDLCI" XX SQ Sequence 7545 BP; 2375 A; 1352 C; 1827 G; 1991 T; 0 other; tgatactgat acagtgtaca ctcacgtcgt gagtaaacag attgacgtaa cgcctcaatc 60 gtggtcaagg accagcatta ctatgctatc acattaaata caatcacatt gtattccaaa 120 actttccgtc taatcgcgtg aaaggttaca aatggctttc tcttacagaa cgccacaaga 180 agagctcctg agcagactac cccagtctca acaggaagtt ataagtggat tccaatatga 240 acgcattcaa aaggaagagg agaagaaggt ggaaaacctc ttcttttacc taccagagaa 300 aactagggaa tggtttacta agtcgggtgt ttatctatca ccattcgctt atgttaatca 360 ctctcaccct ggttgcaaaa ctctggagaa ccacctttta tttaacgttg tagctagcta 420 tattagtaaa tattcttatg tagcgtgtct tagtattaag tccaataaaa tgagcaagat 480 ggaacgattg ggttccaatt ctgttaagac ttatgacatt ttgaataggt tagttacagt 540 caaaggcaag ggccgttatg gacctttagc aaaacccgag aggtctccat gtccaaagaa 600 aaccaacatt ttcatccatg atgaaattca ttactggtca agagaccagc ttgagacatt 660 tctacaggtc cacagaccta aaaatttatg ggcaaccttg gtgtttcccc ctgagatatt 720 ggcaggttat aaatcgtccg tccttccatt tctttaccaa tttgagattc atggtaaaga 780 cctggtttac atgcctgatg gagtgaggtc agaaagttac actcaacccc ttgaaaatgg 840 ttacctcctg agctcaagta gtatacttgt cagaaacaag accacaggag ttgaaatgag 900 gtaccaagtt agtctcatat attcattggg ctcccatcac ttgttccata tttacccaac 960 tgaggattta atgaaagagg aagtgcggag atttgggccc tatgatctct ttgatgttgg 1020 ttcacttttt gttaagcccg tgcgggttcc gatccaggac tttcctctga gcgtattcaa 1080 gaaaatcttc atctacataa gctcactgaa gaggcctggt gtgcaatcag cagtggctaa 1140 attgaggcag ttatccgatg ctgacatttc aattgaaagc gtcttcatgg tgcaggagtt 1200 tgccagcagg atagagaaag atggagtgga gaaatggtcc tgttcctttt ggggatgcat 1260 gaaagattgg ttctttgaca aattaccata cagagaggtc ttggaaaaga taggactggc 1320 tgatgatttc acaagaagat tgatgaaaat caagccgctt gcattcgaca ttcacaccac 1380 agacagacca ttgactgaca gaatggtaat agatcaaatt tgggaggaaa gacaaagttc 1440 ctgtgatgac atcccaaata tagtcttcta tggaagaaaa gagtggattg agcatggggt 1500 tgtgccaaaa ataaaaaaaa gtctggctaa actgattccc gggagggaaa tggagtctag 1560 tgattacccc aaggaaattt attctgattt gctatcttca acatcaatct ggagatcata 1620 tgatgatgat ctaaggcata ggaatgccag tcccactgtg gtactaaaat cgagtagaag 1680 ctactcagag gcagcaggat ttaactctca ttgtctgagc atatgtgcaa ctgctcacga 1740 tgaagtagtc atgaagacac cttttgaact caagcgtgaa gctaataaga aggaattgtc 1800 tatgcattgc ctgaattttc acatgaagaa gatgaaggtg aaaagcttac cggagcttga 1860 ggccaagctg aatgagcatg gcaaaggaat ctttaggaag aaggaaggaa ccagaaaggt 1920 caagaggcca aggatggtcc cggtgcatct gctcaagcaa gtcaatgatg tcaaaggtga 1980 taagatcaat gaggaaacga gaaggaagcc gaatccccag ccaggtaaaa gaaggaatga 2040 aggagagaaa gatgtgagcc cccatgatga agggtttccg gtggagtgca ccaaaacaaa 2100 tgcgcaatca gctcagaagt tccccacaag ctccaagttg agtgatttaa ttggaaagac 2160 acaactctcg tcacgtggtt tgattaaaac tgttgggaat gattaccttg ccttggcgga 2220 gcaaatagag tgcatgccac tctctcaact caagaacaag aaagcggcat atttctgcct 2280 tgattttccc atggtctatt ttcatgacag agtttcctat ccagctttcg aagcaacagg 2340 ggaaattaga caagtcataa tgagggcaag agataaatgg ggaatcaatt tcaacagtgc 2400 attgatccaa gtctacaatg atgggtgcag attacccttg cacagtgaca atgaggagtg 2460 ttatgatgat gatggaattc tcacaattaa tgttaaagga gatgcaaaat tccacaccac 2520 ttgccatgat gaggttatag aactcaagca agggaacgag atactgatgc cagcaggtta 2580 tcaaaagagg aataggcacg ctgttgaagt tgattctgaa gggaggacaa gcgtcactct 2640 cagagtgcac aagagggact tcagctttga atctaaactc agattcatca agggcaagtt 2700 tgattgcctc tttgttagca ttgccgagat aatacacaaa aaaccagaag aggttatgat 2760 gttcatccca catattatgg acagatgcgt aagtaataaa ggttgttcgc ttgatgatgc 2820 aaaggcaata tgcgagaggt acgagattaa aatagaatgt gagggtgact gtggcttggt 2880 cgaatgtgga acatcggggc tctcggtcgg tagaatgctg ctgagaggaa accacttcac 2940 tgttgcttct gttaggaggt cctccattga ttcacttgct aactcatcaa aagagatcaa 3000 gtcaaatggt gttttggatc atgtgacgtt taactttcac aaaagactta aactggttga 3060 gcctgatttg acaatggtgg acacaaaggt ggatccctcc agggcaggaa agctgcttaa 3120 gagtttaatg gatggtatga ctgggattgt ctctcacaat tcaacccatg aagggtggag 3180 gatgattaag gggataaaca gcacctctga gatgagatca ttcatgagca tgattaaagg 3240 tcaatgtgag gatacaaaaa gcgatctgtt tgacaaggtt caagagttga atttcatgaa 3300 ggtgaagata tatggcatct tcgggtttgc tggatctggg aagagtcatg caatacaaaa 3360 tttaatccaa actgaattca agggttctca gggagtgatg gtgatttgtc ccagaagatt 3420 tttggcaaag gactggagtg aaaagggagt ggatgaaaag gacatcaaaa ccttagagag 3480 tgcgctaaag tcagacatca aaggaaagag gctgttcata cttgatgaag tcagtttact 3540 acccaagggc ttcaccgatc ttatcatgct caaaatgcat atggaagaga ttctgaagaa 3600 atcaacgatt gtctgtattg gcgacccact tcaagctggg tacttctgtc ctaaggatga 3660 cagttatctg tctagggaag gagagattaa aaggttattc aaggatggtg taaattacaa 3720 gtggtacagt tacaggatca acaaatttgt cgcaaagaag ttggccattg aaacaatgaa 3780 tgacttcatt ggaatagatg agcaaagctc aatctacaag gatatgccat ctgccaatca 3840 cttcatggaa aagaaaggga atcatataga agtgattctc gttgccagca tggttgaaaa 3900 ggaactctat tccaattatg gcaacgtcat gacattcgga gaatcacagg gtttgacatt 3960 caattgtgga gtgattgtac tttctgagga agccaagctg tgctctgatg cgcacataat 4020 ggtagcaata acaagattta gaagaggctt ctgttttgca ttgggaagca aaggttcgaa 4080 agaggattac atgagatcaa tgaagagtgg attgctccag aggatgtgtt cgggaattgg 4140 tgcttcaaaa gagttcatct tgggatcctc ctctgtcagt ttgaatttga gcgaaaagga 4200 tattactagg ggagcaggtg tcgatgaaat ggatagagaa gccaggttgg aaggagatgt 4260 ctggctcaaa agcatgatat accttgggaa aagataccac atgatcgaac cgctcggcca 4320 ggtgattaaa ctgacagaca gtgcaatcaa gtgtcacatt ccggtttgct caagtcaaac 4380 cctaggtcct gagcttgaca atattcaagc aagggaattc agggaattca aaggaaaaaa 4440 tggatggtcg aaccaattca gagaggaggc cgggccaaat tggagatttc cttacaaagt 4500 gaatcaggca atgagctatg aggctgtata cccaagacat agaatggatg atgacctcac 4560 cttcctggca gcaataaaga aaaggctgcg ttttgacaat gttgccaaca attacgcaaa 4620 attcaaggca gctgaaaaca gagggaagta cttggcaaaa attttcctca agcatgttcc 4680 tatcaaatgt ggcagagatc aaaggctttt ggatcaatgt aggcaggaat ttgaggagac 4740 aaaactgtca aaaagtgcag cgacgattgg agcgcactct cagaggtcag actcagattg 4800 gcctttggac aaaattttct tgttcatgaa atctcaattg tgtacaaaat ttgaaaaaag 4860 gttcaccgaa gccaaagcgg gtcaaacctt ggcttgtttc ccacacaaga tccttgtgga 4920 atttagtcca tggtgcaggt acacagaaaa ggttctctcc gcgaatctgc cggataacta 4980 ctacatacat caaaggaaga atttcagtga actcgaggat tttgcaaaaa gattttcaaa 5040 cggctcagta tgtgtggaat cagattatac ggcttttaac gtctcgcaag atcacactat 5100 tttggcattc aaggtggagc tcctcaagca tttcggttgg gatgacagta ttcttcaaag 5160 ttacatcaaa atgaaatgca ctttgggttg cagacttggt ggttttgcta tcatgagatt 5220 cacaggggag ttttcaactt tcttattcaa cacacttgcg aacatggttt tcacattctg 5280 cagatatgag gttcctgatg gaactccaat ttgcttcgct ggagatgata tgtgtgcttt 5340 gaggaatttg agagaaatag acacccatga gttcattctg aacaaattga gcctgaaggc 5400 caaagtgaac agaacgagag ttccaatgtt ctgcggctgg cgtttgtgtt gcgatggttt 5460 gatcaaagag ccatgtttga tctatgaaag actgcaggtt gcaattgaaa atggaagatt 5520 gatggatgtg atagactcat attttctgga attttcattc gcctacaaat taggtgagag 5580 gctttattca catcttgaaa ttgaacagct gaattatcat caggttttga caagattctt 5640 cataagaaac aaacatctgt tgagaggaga ttcaagacac aacatttctg aacttgagtg 5700 gttgtctgac gaggatggcg acgatgataa ggggtcacaa attgaagatc gcagaagggg 5760 atattccaat tgctggggtg aaaagctcca gaatctattc tgacgttagt cctttcaaga 5820 gggcatctga cctcatgatc cattggaacg aattcgtttt taaggtcatg cctgaggaca 5880 tagcagggga cgggtttagg ttggcatcaa tgcctgtcat accttcatct gaggtgcaag 5940 cagttctgag gaaaagagaa agcacaaatt atgtgcattg gggggcatta tccatatcaa 6000 ttgatgcttt gttcaggaag aatgcaggtg tgtcaggttg gtgctacgtg tatgacaata 6060 gatgggagac atttgagcaa gcgatgctgc agaaatttca ttttaacttg gatagcggtt 6120 ccgccacctt ggtgacctca cccaatttcc ctgtttcatt ggatgatcca ggcctttcta 6180 actctatcag cgtggctgtg atgtttgaga accttaattt caagttagaa agctacccaa 6240 tcagtgtgag agtaggtaat atgtgcaggt tctttgacag tttcctgagc agtgtcaaaa 6300 acaaagttga ttcaaatttc ctgcttgagg ccgcaaatgc ggatccgctg ggggtagggg 6360 cctttgggtt tgagcaggac gatcaggtga gtgagttgtt caactacatt catacagttc 6420 caactcaggc catcaaatcg agggaacatg aaatcccaaa aggattgttt ggaatgctag 6480 gaaagaagaa ggtcaaatcc tttgagttcg cctcgggatc aaggagtatg ggaagaataa 6540 agccgtatag agggatgcaa tttgagaggt cctccagcca aagaattgtt cctggattta 6600 ggtcccagga tgataaaaat gaatatcaaa gcttatcaac tgacagtgat tttgaaaatt 6660 ttctcaaaag gaaggacaaa ggtaaagctg gggccaaatc cattgcttca gaggggtcat 6720 ccattgacaa catatctcca agagagtttc agtttgctag acaaaataag aagaaggagg 6780 atggcagcag ttctgaactt gcagctaaag gtggacgcag atctgaaagc attcctgggc 6840 gcagaaggca gaccccttca tggaaagaca ggggtaatcc tggaacagat actggagtcc 6900 atcttcgcga acatagcaat ccaaggaacg tcggagcaga cggagtttct tggactaacg 6960 gtggaggtga agtcaatgga ggatcagaag gtgataggat cttacaattt gagggaggtc 7020 gtcaacctga tcaaggcctt caagattacc tcttcggacc agaatatcaa caatatgacc 7080 ttccggcagg tgtgtgaggc ctttgcgcct gaggcaagaa atggtctggt aaagctaaag 7140 tataaagggg ttttcacaaa cctttttaca acaatgccag aggtggggag caaataccct 7200 gaactcatgt ttgacttcaa taagggcctt aacatgttta tcatgaacaa ggctcagcaa 7260 aaagtaataa ctaatatgaa tcgaccgctt ttacagactg aatttgcaaa aagtgagaat 7320 gaggcgaaac tctcgtctgt gtcaactgac ctttgcattt agactgttca ggatgtttgg 7380 tttaataaat aaaataaata aatagcgtgt ttaaattgat acttaaatat gtttgatgaa 7440 taaacaaact cttgaaccca tgaaagagta taaagagtca tggtatttaa ttggagtgtt 7500 tagacttata ataaatagcc tgtagacttt taaatatttt actac 7545 //