ID   AJ238493; SV 1; circular; genomic DNA; STD; VRL; 1367 BP.
XX
AC   AJ238493;
XX
DT   01-NOV-1999 (Rel. 61, Created)
DT   01-NOV-1999 (Rel. 61, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication-associated protein
XX
KW   rep gene; replication-associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1367
RA   Stanley J.;
RT   ;
RL   Submitted (22-APR-1999) to the INSDC.
RL   Stanley J., Department of Virus Research, John Innes Centre, Norwich
RL   Research Park, Colney, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1006/viro.1999.9948.
RX   PUBMED; 10544139.
RA   Saunders K., Stanley J.;
RT   "A nanovirus-like DNA component associated with yellow vein disease of
RT   Ageratum conyzoides: evidence for interfamilial recombination between plant
RT   DNA viruses";
RL   Virology 264(1):142-152(1999).
XX
DR   MD5; b0f0bd18049313ffafcf5da1e95c3b0b.
DR   EuropePMC; PMC2922188; 20678232.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1367
FT                   /organism="Nanovirus-like particle"
FT                   /host="Ageratum conyzoides"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /mol_type="genomic DNA"
FT                   /country="Singapore"
FT                   /clone="pAYVV1/7"
FT                   /note="viral component DNA 1"
FT                   /db_xref="taxon:96892"
FT   CDS             71..1018
FT                   /gene="rep"
FT                   /product="replication-associated protein"
FT                   /function="initiation of rolling circle replication"
FT                   /db_xref="GOA:Q9QCM5"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QCM5"
FT                   /protein_id="CAB59911.1"
FT                   /translation="MPALKGQWWCFTVFFLSSTAPDLVPLFENTHVSYACWQEEEAPTS
FT                   KRRHLQGYLQLKGQRTLNQVKALFGELKPHLEKQRARKSDEARDYCMKEETRVSGPYEF
FT                   GDYCPSGSHRRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQATVAEIQISNLKSW
FT                   QLRLKTLLDRDPDDRTIFWVYGPIGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT                   CLGANIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   DKISEDRVHVIPCIPCGACLKHHIGLIKCDEYLD"
XX
SQ   Sequence 1367 BP; 438 A; 253 C; 295 G; 381 T; 0 other;
     accccgcctc gagaccccca gctgaagacc tcttaattgc aaataagccc ttctctctct        60
     ctcataaatc atgcctgcac ttaaaggcca atggtggtgt ttcaccgtct tcttcctttc       120
     ttccactgct ccggacctag taccgttgtt cgagaacaca cacgttagtt acgcctgctg       180
     gcaggaggag gaagctccga cgagcaagcg tcgacacctc caaggctacc tgcaattgaa       240
     gggtcagaga accctaaatc aggtgaaggc tctatttggg gaactcaagc cccatttgga       300
     gaaacagcga gctcgtaagt cagatgaagc tcgcgattat tgtatgaaag aagaaactag       360
     ggtttccggt ccctacgaat ttggggatta ttgtcctagt gggtcccacc gtcggagaca       420
     aagggaatta gtaattcgaa gtccggtaag gatggccgaa gaaaatccgt ccgtcttccg       480
     acgagtaaaa gcaaaaattg ctgaagaaga attccaggct actgtagctg aaattcaaat       540
     ttcaaatttg aaatcttggc aactgcgcct aaagacgctc ctcgacaggg acccagatga       600
     ccgcactatc ttctgggttt atggtcccat tggtggggaa ggaaaatcaa cctttgccag       660
     agatctgtac agaagtgggt cctggtttta cacacgtgga ggttctgctg ataatgttag       720
     ttatcagtat ataggatgtt taggagctaa tattgtattt gatatccctc gtgataagaa       780
     ggattattta caatatagct taatagaaat gtttaaggat agattaatag ttagtaataa       840
     gtatgagcct ttaatggctc cgttaattaa ttgtattcat gtagtagtta tgtctaattt       900
     tctccctgat tttgataaga ttagtgaaga tagagtccat gtaatcccgt gtattccttg       960
     tggtgcatgc ttgaagcatc atattggttt aataaaatgc gacgagtatt tggactaaat      1020
     acgagtataa atacatgtat tttgtttctt taaaaaaaga aagaatgata tgaaagaaaa      1080
     acaaacatac aagcccaata atataattga attcattaaa accaggcccc gcaggggcac      1140
     tgtctttgat ccaggcccaa ttaaaagaac taaattattt aaagaaaaaa ggaaaatata      1200
     ttaataatgc tttattaaaa cgacatcgtt ttggaaagga cttaaaagaa aatatgaaat      1260
     aacgcggaag gacttaaaat gtaaatatat gaaaatataa ggatagcgga gcaatttttt      1320
     aggtcccttg gctatatata acacgtcatc gaggcgggca tagtatt                    1367
//