ID AF485256; SV 1; linear; genomic RNA; STD; VRL; 3341 BP. XX AC AF485256; XX DT 18-SEP-2002 (Rel. 73, Created) DT 01-NOV-2021 (Rel. 144, Last updated, Version 4) XX DE Amapari virus strain BeAn 70563 segment S, complete sequence. XX KW . XX OS Amapari virus OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3341 RX DOI; 10.1006/viro.2002.1695. RX PUBMED; 12504568. RA Archer A.M., Rico-Hesse R.; RT "High genetic divergence and recombination in Arenaviruses from the RT Americas"; RL Virology 304(2):274-281(2002). XX RN [2] RP 1-3341 RA Archer A.M., Rico-Hesse R.; RT ; RL Submitted (20-FEB-2002) to the INSDC. RL Virology and Immunology, Southwest Foundation for Biomedical Research, 7620 RL NW Loop 410 @ Military Dr, San Antonio, TX 78227, USA XX DR MD5; 86e0a00bb6d3e2d2d0961d7c447459c9. DR EuropePMC; PMC2277458; 18421377. DR EuropePMC; PMC3047505; 12504568. XX FH Key Location/Qualifiers FH FT source 1..3341 FT /organism="Amapari virus" FT /segment="S" FT /strain="BeAn 70563" FT /mol_type="genomic RNA" FT /db_xref="taxon:2886894" FT gene 62..1507 FT /gene="GPC" FT CDS 62..1507 FT /codon_start=1 FT /gene="GPC" FT /product="glycoprotein precursor" FT /db_xref="GOA:Q8B122" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/TrEMBL:Q8B122" FT /protein_id="AAN09934.1" FT /translation="MGQLVSFFQDIQLFFQEALNVALAVVTVLAIIKGLVNLWKSGLFQ FT FLFFLILAGRSCSFRIGHHTTFESVTMSVGGVFHELPALCRINNSHSLIQLSHNSSLAL FT SVEYVDLCVVLESDQYLVAGDYSNCTGEATGYNWVIDWTLKGLGHGLEGDPKLHCQPKR FT STNAEFTLQLNISRRHTNDHYRERIETGIRHMFGPFKILTKEGKDCVILRNTTWKEQCV FT KSHYNTLAFLLKNTANSLPKRRPLAFFSWSLSDSSGNDMPGGYCLEEWMLIAAKLKCFG FT NTALAKCNLNHDSEFCDMLKLYEFNKNAISKLNNQTREAVNALTHSINSLISDDLLMKN FT KLREFLKVPYCNYTKFWYVNHTKSGEHSLPKCWLVNNGSFLNESEFRNEWILESDHLIA FT EILSKEYQDRQGKTPITLVDMCFWSAIFFDNKSLLHLVGFPTHRHIVGEACPLPHKINR FT HGACACGLYQKLKKKTAWRKRHQ" FT gene complement(1607..3289) FT /gene="NP" FT CDS complement(1607..3289) FT /codon_start=1 FT /gene="NP" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q8BDE7" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/TrEMBL:Q8BDE7" FT /protein_id="AAN09935.1" FT /translation="MANSKEIPSFRWTQALRRELGSFTEPTKGSVLKDAKLIADSLDFT FT QVSQVQRLLRKTKRTDADLDKLRDLNKEVDKLMSMKSAQRNTVLKVGDLGKDELMDLAS FT DLEKLKRKIGERPNGGPRLYMGNLSQSQLDKRSDILRSLGFQQQRGPNQGIVRLWDVSD FT PSKLNNQFGSMPALTIACMTVQGGETMNNVVQALTSLGLLYTVKYPNLDDLEKLTVEHD FT CLQIITRDESALNISGYNFSLSAATKAGASLIDGGNMLETIKVTPDNFSSIIMATLKVK FT KREGMFVDEKPGNRNPYENLLYKLCLSGEGWPYIGSRSQIVGRSWDNTSVDLNTKPTVG FT PRGPERNGQNMRLSNLSELQEAIVREAMQKLDPSNTIWMDIEGPPTDPVELAVLQPSTG FT YYIHCYRKPHDEKGFKNGSRHSHGILLKDLEDAQPGLLSYIIGLLPQNTVITVQGADDI FT KRLFDIHGRKDLKLVDVRLTGEQSRIFEQEVWERYGELCKAHNGVIVPKKKHKDNGPQK FT EPHCALLDCIMFQSVLDGHLPELSLKPLLPGSLVYQARNAFVM" XX SQ Sequence 3341 BP; 893 A; 743 C; 714 G; 991 T; 0 other; cgcacagtgg atcctaggcg caattgttca cgcaattttg catatctatt aacaattgat 60 catgggtcaa cttgttagtt tctttcagga catacaactc tttttccaag aggctctcaa 120 tgtggctcta gctgttgtca ccgtcctggc tatcattaag gggcttgtga acctttggaa 180 atcaggtctc ttccagttcc tctttttctt aatcctggca ggaaggtctt gctccttcag 240 aattggtcat catacaactt ttgaatctgt cacaatgtca gttgggggag tctttcacga 300 acttcctgct ttgtgcagga tcaataacag ccacagtcta attcaactgt ctcacaacag 360 tagtttagct ttgtctgtcg aatatgtgga tttgtgtgtc gttctagagt cagaccagta 420 tttagtggct ggggattact ccaactgtac tggggaagcg acaggataca actgggttat 480 tgactggacg ctaaagggtc tgggtcacgg tcttgagggc gaccccaagc tgcactgtca 540 gccaaagaga tctaccaatg ctgaattcac cctccaactt aatatatctc ggaggcatac 600 aaatgaccac tacagggaaa gaattgaaac aggaataagg cacatgtttg gtccgttcaa 660 gattttgact aaagaaggga aggattgtgt aatcttaagg aacacaactt ggaaagaaca 720 gtgtgtcaaa agtcattaca acacactagc atttctatta aaaaacacag ccaactctct 780 cccaaagaga aggcccttgg ccttttttag ttggtcactt tctgactcat cagggaatga 840 catgccaggt gggtactgtc ttgaggaatg gatgctcatt gcagcaaaac tcaaatgctt 900 tggaaacaca gctcttgcta agtgcaactt aaatcatgat tctgaatttt gtgacatgtt 960 gaaactgtac gaattcaaca agaatgcaat ttccaaacta aacaaccaga caagagaagc 1020 tgtgaatgca ttgacccact caataaacag cctaatttct gatgaccttt tgatgaaaaa 1080 caaattaaga gaatttctta aggtcccata ctgcaactac acaaagtttt ggtatgtaaa 1140 tcacacaaaa tctggtgaac attctctgcc aaaatgttgg ttggtgaaca atgggagctt 1200 tttaaatgaa agtgaattta ggaacgaatg gatcttggag agtgatcact tgattgcaga 1260 gatacttagt aaggaatacc aagacaggca gggaaaaacc ccaataacat tagtcgacat 1320 gtgtttttgg agtgctattt tcttcgacaa caagtctctc ttacacttgg ttggatttcc 1380 aactcacaga catattgtag gagaagcatg tccattgccc cataagatca acagacatgg 1440 agcttgtgcc tgtgggctat accaaaaatt aaagaagaag actgcttgga gaaaaaggca 1500 ccaatagaga ggctcagcct ccctcctcca tcggcccggg acatcccggg ccgatggagg 1560 ggccccccag tccgcggcct gggccgcgga ctggggaggc atttgcctac atcacaaatg 1620 cattccttgc ctgatacacc agactacctg gtagtaaggg cttcaggctg agttcaggta 1680 agtgaccatc aagtacagac tgaaacatga tgcagtcgag cagggcacag tggggctctt 1740 tttgaggacc attgtccttg tgcttctttt taggaactat cacaccattg tgtgccttgc 1800 agagctcgcc atatctctcc caaacttcct gttcaaaaat tcgtgattgt tctccagtga 1860 gtcttacatc caccaatttt agatcttttc gcccatgtat gtcaaaaagt ctttttatat 1920 catcggcacc ttgaactgta atgacagtgt tttgaggtag aagcccgatg atgtaactta 1980 gaagtccagg ttgggcatcc tcaagatctt ttaaaagtat tccgtgggag tgtctactgc 2040 catttttgaa acctttttca tcatgtggtt ttctgtaaca atgtatatag tatccagttg 2100 aaggttgaag aacagcaagt tccacggggt ccgtgggggg cccctctata tccatccata 2160 tggtgttgga tggatctaac ttttgcattg cctctctcac aattgcttcc tgcagctcag 2220 aaagattgga aagtctcatg ttttgaccat tcctttcagg accccttggt cctactgttg 2280 gtttggtgtt taagtcaaca cttgtgttgt cccatgatct ccccacaatt tgagaccttg 2340 aaccgatgta cggccaacct tctccagaga gacacaactt gtagagaagg ttctcatagg 2400 ggttcctatt cccaggtttc tcatccacga acatgccttc tctctttttc actttcagtg 2460 tggccatgat aatggatgaa aagttgtccg gtgtcacttt gatggtttct aacatgttac 2520 ccccatctat aagggaagca ccagcttttg ttgctgctga aagactgaag ttgtaaccag 2580 agatgtttaa agcactctca tctcttgtaa taatctgaag gcagtcatgc tcaactgtaa 2640 gtttctctaa atcatccaga ttagggtact tcactgtgta aagaagacct aaagatgtca 2700 aggcttgcac cacattgttc atagtctccc ctccttgaac agtcatacat gcaatggtca 2760 atgcaggcat tgacccaaac tgattgttta atttagacgg atcagaaaca tcccagagtc 2820 tcacaattcc ttgattaggt cctctttgct gttgaaatcc tagtgacctt agaatgtcag 2880 accttttgtc cagttgagat tgggacaaat ttcccatata taatcttgga ccaccattgg 2940 gtctctctcc aatttttctt ttaagctttt ccaaatcact ggccaaatcc atgagttcgt 3000 ctttccccag atcgccaact ttcagtactg tatttctttg agcacttttc atgctcatta 3060 gcttatcaac ttctttgttc aaatctctca gtttgtcgag atcggcatcg gttctcttcg 3120 ttttgcgaag aagcctctgg acttgggaga cttgagtgaa gtctaagctg tctgctatta 3180 acttggcgtc cttcaggaca cttcccttgg tgggctctgt gaagctgccc agttcccgtc 3240 tcagggcctg agtccagcgg aagctgggaa tctctttgga gtttgccatg aaaagttttt 3300 tgcacaagag ttagacaaaa ttgcctagga tccactgtgc g 3341 //