ID AF403399; SV 1; linear; genomic RNA; STD; VRL; 3877 BP. XX AC AF403399; XX DT 12-AUG-2002 (Rel. 72, Created) DT 23-NOV-2005 (Rel. 85, Last updated, Version 4) XX DE Golden shiner reovirus segment 2 RNA-dependent RNA polymerase VP2 gene, DE complete cds. XX KW . XX OS Golden shiner reovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3877 RX PUBMED; 12124458. RA Attoui H., Fang Q., Jaafar F.M., Cantaloube J.F., Biagini P., De Micco P., RA De Lamballerie X.; RT "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed RT by genome characterization of Golden shiner reovirus, Grass carp reovirus, RT Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family RT Reoviridae)"; RL J. Gen. Virol. 83(Pt 8):1941-1951(2002). XX RN [2] RP 1-3877 RX DOI; 10.1016/j.virol.2005.08.028. RX PUBMED; 16171838. RA Attoui H., Mohd Jaafar F., Belhouchet M., Biagini P., Cantaloube J.F., RA de Micco P., de Lamballerie X.; RT "Expansion of family Reoviridae to include nine-segmented dsRNA viruses: RT isolation and characterization of a new virus designated Aedes RT pseudoscutellaris reovirus assigned to a proposed genus (Dinovernavirus)"; RL Virology 343(2):212-223(2005). XX RN [3] RP 1-3877 RA Attoui H., de Micco P., de Lamballerie X.; RT ; RL Submitted (30-JUL-2001) to the INSDC. RL Virologie, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin, RL Marseille 13005, France XX DR MD5; c31800850b180f30b994323ff86bf8e7. DR EuropePMC; PMC4284399; 25348270. XX FH Key Location/Qualifiers FH FT source 1..3877 FT /organism="Golden shiner reovirus" FT /segment="2" FT /mol_type="genomic RNA" FT /note="Golden shiner reovirus" FT /db_xref="taxon:185783" FT CDS 13..3837 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase VP2" FT /db_xref="GOA:Q8JU61" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR012915" FT /db_xref="UniProtKB/Swiss-Prot:Q8JU61" FT /protein_id="AAM92745.1" FT /translation="MEELFNALPQPLQQLSLALAGEIPLTDHIFEQAASTWHVQPRSLT FT YKLLDHIPFSTPVVVPPSIYHSLDWSKCFAVNQDRVERVPTIDDPDDVYVPNSDIGPLL FT TSLHTIPDYGFLHPAIENDATTLRAERARCASTFYKIASSQARQVKLDPIRMLGFLLLV FT QARPRVPSGLVTDQPTRRDPTQSPALHAIWQVMQYYKVAGVYYAPALVVPSGAIWWIPP FT PGKRNVVSVQYLLTDLINLAILAHMTDMSPTLELTGVLMYLRAASSHSHAYTLLQMKSV FT FPALSLRSMYRNKGFGGKAPAIEWTEPRSKYKFRWTGVTQLHDGLRPRSPSMDVPTLEV FT LTKYELVDIGHIIIRERNAHPRHNHDSVRFVRDVMALTSGMYLVRQPTMSVLREYSQVP FT DIKDPIPPSAWTGPIGNVRYLLPSVQGPARHLYDTWRAAARQIAQDPQWHDPLNQAIMR FT AQYVTARGGSSASLKFALKVTGIVLPEYDDSKVKKSSKIYQAAQIARIAFMLLIAAIHA FT EVTMGIRNQVQRRARSIMPLNVIQQAISAPHTLVANYINKHMNLSTTSGSVVTDKVIPL FT ILYASTPPNTVVNVDIKACDASITYNYFLSVICGAMHEGFEVGNADAAFMGVPSTIVSD FT RRSSVAPYSRPISGLQTMVQHLADLYAAGFRYSVSDAFSSGNKFSFPTSTFPSGSTATS FT TEHTANNSTMMEYFLNVHAPSHVKSASLKRILTDMTIQRNYVCQGDDGILLLPHEAASK FT ISADDMNELLTCLRDYGQLFGWNYDIDWSDTAEYLKLYALMGCRIPNTSRHPPVGKEYA FT APQTDEIWPSLIDIVIGHHLNGVTDVLNWREWLRFSWAFACYSSRGGYTNPKGQSFSAQ FT YPWWTFVYLGIPPILLPGQTPFIHSCYMPPGDQGMFSILNGWRDWLISHASTTLPPLRH FT NHPVWGLSDVPSLLSQFGVYAGYHAAQHYRRPKPAPETASSDSINQITSDLTEYLFYDS FT ALKARVMKGRYNWERLSSSLSLNVGSRVPSLFDVPGKWVAAGRDAEKPPPSSVEDMFTS FT LNRCIRRPTHSFSRLLELYLRVHVTLGESIPLAIDPDVPQVAGADPANDDHWFKYTCLG FT DIPSATRNYFGESLFVGRVVSGLDVEAVDATLLRLKILGAPPEAFIAVLNGIGMSDSEA FT HQIAGRISLANAQLVQIARVVHLSIPSSWMTLNTGPYIHHHAYDFKPGITQPSAKSRDK FT SIWMSPILKLLCTSYAMTVAGPVRTSIVTEIDGSAAALSGNLRVWMRDV" XX SQ Sequence 3877 BP; 829 A; 1219 C; 844 G; 985 T; 0 other; gttatttgta ccatggagga attgttcaac gccctacctc aaccactaca acaactctca 60 ttagctctgg ccggtgagat accattgaca gatcacattt tcgaacaagc agcttccacc 120 tggcacgtcc agccccgatc actcacctat aagttattag atcatattcc cttttctact 180 cctgttgtag ttcccccttc catataccat tcattagact ggagtaagtg cttcgctgtt 240 aaccaggatc gtgtagagcg cgttcctact atagacgacc cagacgacgt gtacgttccg 300 aactccgaca tcggccccct cctcacttcc ttacatacca ttcccgacta cggtttcttg 360 catcctgcaa tcgaaaatga tgccaccacc ctgcgcgcgg aacgtgctcg atgcgcttcc 420 actttctaca agattgcctc ctcccaagct cgtcaagtta agctggatcc cattcgcatg 480 ctaggtttct tacttctggt gcaagctcgt cctcgcgtcc cctcaggcct ggttacagat 540 cagcccactc gtcgcgaccc cacgcagtcg cccgcccttc acgctatatg gcaggtaatg 600 cagtactaca aggttgctgg tgtgtactac gcccctgctc tggtcgtccc atctggcgct 660 atatggtgga tcccccctcc cggtaagcgc aacgtcgttt ccgtccaata cctgttaact 720 gatctgatta acttagccat cctggctcac atgaccgaca tgtcccctac cttggagctt 780 accggtgtcc tgatgtacct cagagccgct tcctctcata gtcacgccta caccttgctt 840 caaatgaaga gcgtattccc agccttatcc ttgcgctcca tgtatcgtaa caaagggttt 900 ggcggcaaag cgcccgcaat agagtggact gaaccgcgct ctaaatacaa attccgatgg 960 actggcgtca ctcaattaca cgatggcctc cgaccgcgct ctccgtctat ggacgtccct 1020 acacttgagg ttttgacgaa atacgaactg gtcgacatcg gacatatcat cattcgagaa 1080 cgcaacgctc atcctcgaca taatcacgac tccgtccgat tcgtccgcga cgtgatggct 1140 cttaccagtg ggatgtatct tgtgcgtcaa cccaccatgt ccgtacttcg cgagtactcc 1200 caagtccctg acatcaagga tcccattcca ccctcggctt ggaccgggcc cattggcaac 1260 gttcggtacc tcttgccatc tgttcaagga ccagcgcgtc atttatacga cacgtggcga 1320 gccgctgccc gtcaaatagc ccaagaccct caatggcacg atcctctgaa ccaggccatc 1380 atgcgggctc aatacgtcac cgcccgagga ggttccagcg cgtcgctgaa gttcgccctt 1440 aaagtgacag gtatcgtgct acccgagtac gatgattcca aagtcaagaa gtcctccaaa 1500 atatatcaag ccgcgcaaat cgctcgcatc gcatttatgc ttctaatcgc tgccatccac 1560 gccgaagtca cgatgggtat tcggaatcag gtgcaacgtc gagcacgttc catcatgcct 1620 ctcaatgtta ttcagcaagc tatctccgca cctcatacct tagtcgccaa ctacattaat 1680 aaacacatga acctctccac aacctccggt agcgttgtta ctgataaggt catccctctc 1740 attctctacg cctccactcc cccaaacacc gtcgtcaatg tcgacattaa ggcttgcgac 1800 gcctccatca cttacaatta cttcctctcg gttatttgcg gagctatgca tgagggtttc 1860 gaggtcggca acgctgacgc cgcgttcatg ggagttccct ccaccatagt gtctgatcgc 1920 aggagttccg ttgctcccta ctctagacca atttcaggct tgcagactat ggtgcagcac 1980 ttggctgatc tgtacgctgc tggcttccgc tattccgtct ctgacgcttt ctccagcggc 2040 aacaaattct cttttcccac gtccactttt ccttccggct ccactgccac ctccaccgag 2100 cacaccgcca ataacagcac gatgatggag tatttcctca atgtgcacgc cccgtcacac 2160 gtcaagtctg cctccctcaa gcgtatcctc actgacatga ctattcagag aaattacgtc 2220 tgccagggag acgacggcat actactactg cctcacgagg ccgcgtccaa gatctccgct 2280 gacgacatga atgaattact tacgtgtctg cgcgattatg gacagctgtt cggttggaat 2340 tatgacatcg actggtctga caccgctgag tacctcaaac tgtacgctct catgggttgc 2400 cgcatcccca acactagccg ccaccctccg gtcggtaaag aatacgcggc tcctcagacg 2460 gatgaaatct ggcccagctt aattgacatt gtgattggtc atcatctcaa cggtgtcact 2520 gatgtgctga attggcggga atggctgcgt tttagttggg ctttcgcttg ttactcttcg 2580 cgaggtggct atactaatcc taaaggccaa tcattctcgg cacagtatcc ctggtggacc 2640 ttcgtgtatc tcggcattcc accgattctt ttacccggcc aaacgccttt tatccattcg 2700 tgctacatgc cccccggaga ccaaggaatg ttctccatcc ttaacggctg gcgcgattgg 2760 ctcatatccc acgcttccac aacgcttcca cctctgcggc acaaccatcc cgtttggggc 2820 ctatcggacg tcccgtcact cctttcccaa ttcggagtat atgccggtta ccatgcagct 2880 cagcactatc gacggcccaa acctgcgcct gagacggcct catctgactc cataaatcag 2940 atcacgtctg atctcactga gtacctattc tacgactccg cccttaaagc tcgggtcatg 3000 aagggccgat ataactggga gcgtctttcc tcgtcgttgt ccttgaacgt tgggtctcgt 3060 gtgccgtcgc tattcgacgt acccggtaag tgggtcgctg ctggccgtga cgccgagaaa 3120 ccgccaccgt cgtctgtcga ggacatgttc acgtcactca atcgatgcat ccggcgaccc 3180 acccactcct tctcccgcct gcttgaatta tacttgcgag ttcacgtaac gctcggtgag 3240 tccattccat tggccataga cccggacgtt ccgcaagtcg ctggcgctga tcccgctaat 3300 gacgatcact ggtttaagta tacttgcctt ggtgacatcc cgtctgccac ccgcaattac 3360 tttggtgaat ctctcttcgt gggtcgggta gtttcaggat tggacgtcga agcggtcgat 3420 gccaccttat tacgattgaa gatcttgggc gccccccccg aagcgttcat cgccgtactg 3480 aatggtatcg gtatgtcgga ctcggaagcc caccaaatcg ccggacgtat ctccctagcc 3540 aatgctcaac tcgtccagat agcgcgagtc gtacacctat ccataccctc ctcatggatg 3600 accctcaata ccggtccgta cattcaccat cacgcctatg acttcaaacc cgggatcact 3660 caaccatcgg ctaaatcccg cgacaagtca atctggatgt cgccaatatt gaaattattg 3720 tgcactagct acgccatgac cgtcgcgggc cctgtacgta cctccattgt taccgagata 3780 gatgggtcgg cagccgctct cagtggtaac ttgcgggtct ggatgcgtga tgtttagtgg 3840 ttgacttttg gcgtccttcc tggtgcatca cttcatc 3877 //