ID AF403398; SV 1; linear; genomic RNA; STD; VRL; 3949 BP. XX AC AF403398; XX DT 12-AUG-2002 (Rel. 72, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Golden shiner reovirus segment 1 guanylyl transferase/methyl transferase DE VP1 gene, complete cds. XX KW . XX OS Golden shiner reovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3949 RX PUBMED; 12124458. RA Attoui H., Fang Q., Jaafar F.M., Cantaloube J.F., Biagini P., De Micco P., RA De Lamballerie X.; RT "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed RT by genome characterization of Golden shiner reovirus, Grass carp reovirus, RT Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family RT Reoviridae)"; RL J. Gen. Virol. 83(Pt 8):1941-1951(2002). XX RN [2] RP 1-3949 RA Attoui H., de Micco P., de Lamballerie X.; RT ; RL Submitted (30-JUL-2001) to the INSDC. RL Virologie, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin, RL Marseille 13005, France XX DR MD5; dcb82ff5991482815d73c6c767fb9b0d. XX FH Key Location/Qualifiers FH FT source 1..3949 FT /organism="Golden shiner reovirus" FT /segment="1" FT /mol_type="genomic RNA" FT /note="Golden shiner reovirus" FT /db_xref="taxon:185783" FT CDS 13..3912 FT /codon_start=1 FT /product="guanylyl transferase/methyl transferase VP1" FT /db_xref="GOA:Q8JU62" FT /db_xref="InterPro:IPR010311" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/Swiss-Prot:Q8JU62" FT /protein_id="AAM92744.1" FT /translation="MAAVFGIQLVPKLNTSTTRRTFLPLRFDLLLDRLQSTNLHGVLYR FT ALDFNPVDRSATVIQTYPPLNAWSPHPAFIENPLDYRDWTEFIHDRALAFVGVLTQRYP FT LTQNAQRYTNPLVLGAAFGDFLNARSIDIFLDRLFYGPTQESPITSITKFPYQWTIDFN FT VTADSVRTPAGCKYITLYGYDPSRPSTPATYGKHRPTYATVFYYSTLPARSRLLANLAA FT GPTVLEHFDSPTYGPHLLLPQTGDVLGYSSSLISQAALLMVESVMDALRDNANASASTA FT VTRLDQSYHPVTSFDPSTFNTLLQRATNLALLAVQGVQSESAIPAIPTMSDVRSFVARL FT MAEGDPQQWFPYRVDQILYWPESPFVPPIGPFYAPFRPVNFPFTTGSYTVVPDASRPLR FT LLPQYRNATITVQQADDAYEDTALSPLITTHGFCVTGGVSTSIYDISGDPTAYPPAQLV FT DTPNDYFDRERMARRDLFRRLRAPADRSAIKDRAVFDFLASLVNPTTANPVLDTSFSMA FT YLGASSAHANADEPVILADIRSGSIPGLPIPRRIVQFGYDVVHGSLLDLSRAVPTGTFG FT LVYADLDQVEDAGTDMPAANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLY FT ATHATTLHLVKPTIVNSSEVFLVFGGRQSNGALRSTTALQRALLSLYARNAAIDRAVTH FT IPFFGVPDDGTSDLGIDAVRLFDPMFSDAVANLPSNALASLVSRVVPSSIMFTRVPSNG FT PVSTTIYGKRTFLSNRRRARLRDVPMLITTTLVHQRRFTTPPTFTLFSSEAVPVTTLVA FT AGYNSFISEQTRNPNLAHLLDLGTGPECRILSLIPPTLQVTMSDARPCAELMASFDPAL FT TAYVQGDYSTAAFWNGIRCDSATAIFTLGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMW FT LQLNTPLYEVSSLPDLIDIDLRDRVYRFNGGERVEPYADPVPLQQAIAALLPAAALSWH FT TLSPTCDWLPYIIGVGSPLNLSDINTAISYSRLTPILHIDTTTPPLRVNPVPTPLNQQC FT AIRITSLDPAAVLSVQHNGVEVIGGTPGNVISVAGAAALQYILANQEFLLQFTPTLPGI FT FDVFLTTLGQPPVPRGSFTITPPPTTVVLNMPPPGQLDFTDVGNDARITCDPYYQLAVC FT IFKDGQYVRVNPEKASVVTNAPNRDLHFVLDLADNHVLLYLCDVTPSGLGDRIAFPIVD FT IYRIAFPRNTPVRASLPYTGGGAHLTSGGNPFMSLTTPPAVLPAGVALAALSTSVATQY FT PTYTLPAGVYEYVIE" XX SQ Sequence 3949 BP; 748 A; 1344 C; 845 G; 1012 T; 0 other; gttatttgca ttatggctgc ggttttcggc attcagctcg taccaaaact caacacctct 60 acgacacgtc gtacattttt acctctcaga tttgacctac tcctcgatcg cttgcagtcc 120 accaatcttc atggtgtgtt atatcgggcg ctagatttta atccagtcga tcggtctgcc 180 actgttatcc agacgtatcc ccccttaaat gcctggtctc cccaccccgc tttcatcgag 240 aacccacttg actaccgcga ttggacggaa ttcattcatg accgcgctct cgcttttgtc 300 ggcgtactca ctcagcgcta ccctctcacg cagaacgctc agcgatacac taacccgtta 360 gtgcttggtg cagccttcgg tgatttcctt aatgctcgtt ccattgatat attccttgat 420 cgattgttct atggtccaac ccaggaatcc cctatcacgt cgatcactaa attcccttac 480 caatggacca tcgacttcaa cgtcaccgct gattctgttc gcacaccggc cgggtgtaaa 540 tacattacgc tctatggtta tgatccctca cggccgtcca cccccgctac atacggcaaa 600 catcgaccca cttatgctac ggtattctac tactccactc tccccgcccg gtctcgcctc 660 ttagcgaacc tcgccgccgg tccaactgtt ttggaacact ttgattctcc cacttatggg 720 ccccatctgc tactgccgca gacaggtgac gtgttgggat acagttccag tctgataagc 780 caagctgctc tattaatggt ggagtcggtt atggacgccc ttcgggacaa cgctaacgct 840 agtgcctcta ctgccgtaac gcgactagat caatcgtatc accccgttac ctctttcgat 900 ccatccacgt tcaacacatt gctacagaga gccaccaatc ttgcactgtt agccgtccaa 960 ggagtgcaat ctgaaagtgc tattccggct attcctacca tgtctgatgt tcggagcttt 1020 gtcgctcgcc tcatggctga aggtgatccg cagcagtggt ttccctaccg cgtcgatcaa 1080 attctgtatt ggcccgagtc cccattcgtg cccccgatag gcccgttcta cgcgcccttc 1140 cgaccggtta acttcccctt cactacgggc tcatacaccg ttgtacccga cgcctctcgg 1200 ccccttcgtc ttctacccca atatcgcaac gctaccatta ccgtccagca agctgatgat 1260 gcgtatgagg acaccgctct atccccgctg atcaccactc atggtttctg tgtcacggga 1320 ggcgtttcta cgtccatcta tgacatctct ggggacccca ccgcgtaccc tcccgctcag 1380 ctggttgaca cccccaacga ttattttgat cgtgaacgca tggcgcgacg ggatttgttc 1440 cgacgactac gtgcccccgc cgatcgttct gccattaagg atcgcgccgt gttcgacttc 1500 ctcgcgtctc tcgtcaatcc gacaactgcc aacccagtgc tggatacaag cttttccatg 1560 gcttacttgg gagcgtcctc cgcacatgct aacgccgacg aacccgtcat tcttgctgac 1620 attcgttctg gctccattcc tggcctgcca attccccgcc gcatagttca gtttggctac 1680 gacgttgtcc atggttcttt gctcgatctg tcgcgcgctg tgccgactgg tactttcggt 1740 ctcgtgtacg ctgatctaga ccaggttgag gatgccggta cggacatgcc cgctgccaat 1800 cgcgctgcta tcgctatgtt aggtactgcc ctccaaatga cgacagctgg tggagtgtcc 1860 gttctcaaag ttaactttcc cacgcgtgcc ttctggactc aagtgttcaa cttatatgcc 1920 actcacgcga cgaccctcca tttggtcaag cccactattg ttaactccag cgaggtattt 1980 ctcgtctttg gtggaaggca atctaatggc gcccttcgct ccaccactgc actgcagagg 2040 gctttattgt ccctttacgc ccgaaacgcc gcgatcgatc gcgccgtcac tcacatccct 2100 ttcttcggcg tgcccgatga cggtacctca gacctaggta ttgatgctgt taggttattc 2160 gatccaatgt tctccgacgc cgttgctaat ctcccctcca atgcactggc ctcactagtg 2220 agtcgagtcg ttccctcgtc cattatgttc actcgtgtgc cgtctaacgg cccagtctct 2280 accaccatct acggaaaacg taccttcctc agcaaccgcc gtcgggctcg attacgtgac 2340 gtcccaatgc tgatcacgac tacgctcgtt catcaacgcc gcttcaccac tcctcccacg 2400 ttcacgttgt tcagctcaga agccgtgccc gtcaccacgc tggtcgccgc tggttacaac 2460 tccttcattt ccgaacaaac acgcaatccc aacttagcgc acttattaga ccttggcacc 2520 ggtcccgaat gtcgcatcct atcacttatc ccaccgacgc tccaggtcac catgtccgac 2580 gcacgtccct gcgctgagct gatggcctcc tttgacccag cattgacggc ctacgtccaa 2640 ggtgattact ctacagctgc cttctggaac ggtatccggt gcgacagtgc gacggccatt 2700 ttcacccttg gtgctgctgc cgctgccgct ggtaccgacc tgattgcctt cgtccagcaa 2760 ttgatccccc gaattgtcgc agctggaggg acacgaatgt ggttacagtt gaacactccc 2820 ctctatgagg tctcttccct gcctgacctg atcgacattg acttgcgcga ccgtgtgtat 2880 cgttttaacg gcggtgaacg agtcgaacct tacgccgacc ccgtcccgct tcaacaggcg 2940 atcgcagcac tgctccctgc tgctgctctc tcatggcaca ctctatcccc cacttgtgac 3000 tggctgccct acatcatcgg cgtcggctcg cctctcaacc tgtctgacat caacactgcc 3060 atcagctatt cccggctaac ccccatcctg catatcgaca ctaccacccc cccgttaagg 3120 gtcaatcccg tgccgacgcc cctgaatcaa cagtgtgcca ttcgcattac atctctagac 3180 ccggccgctg tcttgtcagt gcagcacaat ggcgtggaag tgataggtgg cacccccgga 3240 aatgttatct ccgtcgctgg cgctgcagcg ttacagtaca ttctcgccaa ccaagagttc 3300 ttgctgcaat tcactcccac gttgccaggt atcttcgacg tcttcctcac aacgttaggg 3360 cagccccctg ttccccgtgg ttccttcacc atcactccgc cgccaacaac cgttgtcctg 3420 aacatgcccc ctcccggaca attggacttc accgacgtcg gcaacgacgc gcgcatcacc 3480 tgcgaccctt attaccagtt agctgtgtgc atctttaagg acggccagta cgtgcgtgtc 3540 aatcccgaga aagccagcgt cgtgaccaac gcccccaatc gcgacctaca tttcgtcctt 3600 gacttggccg acaaccacgt cctgttgtac ctgtgcgacg ttacgccctc cggtctgggt 3660 gatcgcatcg ctttcccgat tgttgacatt taccgcatcg ccttcccccg gaataccccc 3720 gtccgcgctt ccctccccta cactggcggt ggagctcatt taacatccgg tggcaacccc 3780 tttatgtcac tcacaacgcc tcccgcagtc ctgcccgccg gtgttgccct cgctgcgctc 3840 tccacctctg tcgccactca atatccgacc tacactcttc ctgccggcgt gtacgaatac 3900 gtgattgagt aacgggcgcc cacctccgtc agcctgcatc caattcatc 3949 //