ID AF327902; SV 2; circular; genomic DNA; STD; VRL; 2731 BP. XX AC AF327902; XX DT 05-SEP-2001 (Rel. 69, Created) DT 29-DEC-2005 (Rel. 86, Last updated, Version 5) XX DE Ageratum yellow vein Taiwan virus-[TaiwanPD] isolate Tw-PD DNA-A, complete DE sequence. XX KW . XX OS Ageratum yellow vein Taiwan virus-[TaiwanPD] OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2731 RA Hu C., Lin C., Yang S., Hsu Y.; RT "Genomic variations of begomoviruses in Taiwan"; RL Unpublished. XX RN [2] RP 1-2731 RA Hu C., Lin C., Yang S., Hsu Y.; RT ; RL Submitted (13-DEC-2000) to the INSDC. RL Graduate Institute of Agricultural Biotechnology, National Chung-Hsing RL University, 250 Kuo-Kuang Road, Taichung 402, Taiwan XX RN [3] RC Sequence update by submitter RP 1-2731 RA Hu C., Lin C., Yang S., Hsu Y.; RT ; RL Submitted (28-DEC-2005) to the INSDC. RL Graduate Institute of Agricultural Biotechnology, National Chung-Hsing RL University, 250 Kuo-Kuang Road, Taichung 402, Taiwan XX DR MD5; 2af2f8e10bbc626589d7bc88fa7851c2. XX CC On Dec 28, 2005 this sequence version replaced gi:15420333. XX FH Key Location/Qualifiers FH FT source 1..2731 FT /organism="Ageratum yellow vein Taiwan virus-[TaiwanPD]" FT /segment="DNA-A" FT /isolate="Tw-PD" FT /mol_type="genomic DNA" FT /country="Taiwan:Ping-Dong" FT /db_xref="taxon:222443" FT gene 134..484 FT /gene="AV1" FT CDS 134..484 FT /codon_start=1 FT /gene="AV1" FT /product="putative movement protein" FT /db_xref="GOA:Q91B90" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q91B90" FT /protein_id="AAK97346.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEQTYSPDTVGHGLIRDL FT ISVIRARNYVEASRRYCHFHSRLEGTSPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHV FT PQAQTVQNVQNP" FT gene 294..1067 FT /gene="CP" FT CDS 294..1067 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q91B89" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q91B89" FT /protein_id="AAK97347.2" FT /translation="MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNRRRTW FT TNRPMYRKPRLYRMYRTPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTAMDFRQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFSSTVTGGQYASKGQAFVEKFMEPNNYVVYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1064..1468) FT /gene="REn" FT CDS complement(1064..1468) FT /codon_start=1 FT /gene="REn" FT /product="replication enhancer protein" FT /db_xref="GOA:Q91B88" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q91B88" FT /protein_id="AAK97350.1" FT /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKIIKHHERPLNTNHDI FT ITIRIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLNNLGVISINN FT VIRACDHVLWDVLENTEYVTNSHIIKFNLY" FT gene complement(1209..1616) FT /gene="TrAP" FT CDS complement(1209..1616) FT /codon_start=1 FT /gene="TrAP" FT /product="transcription activator protein" FT /db_xref="GOA:Q91B87" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q91B87" FT /protein_id="AAK97349.1" FT /translation="MRNSSPSTTHCTQVPIKVQHRIAKRRPVRRRRVDLTCGCSYYFGI FT DCANHGFSHRGITHCNSMREWRIYLDNQKSPIFQDNQAPREATQHQPRHHNDQNTVQSQ FT PEESVGNTPVFSDLPDLDSLTTSDLAFLKSI" FT gene complement(1522..2601) FT /gene="Rep" FT CDS complement(1522..2601) FT /codon_start=1 FT /gene="Rep" FT /product="replication associated protein" FT /db_xref="GOA:Q91B86" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q91B86" FT /protein_id="AAK97348.1" FT /translation="MPRSSSFQVKAENIFLTYPKCPIPKEEALELIKNIQCPSDKLFIR FT VAQKKHSDGTLHLHALIQFKGKAQFRNSRHFDLTHPNTSTQFHPNFQGAKSSSDVKSYI FT EKDGDYVDWGVFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPKEYIFQFH FT NLNTNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAARPWRPKSIVIEGES FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTRYGKPIQIKGGIPTIFLCNPGPTSSYKECLDEEKNSALKEWAIKNAEFVTLNNPLY FT SGTNQSAAQDSEEEASSQA" FT gene complement(2187..2444) FT /gene="AC4" FT CDS complement(2187..2444) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q77JC6" FT /protein_id="AAK97351.1" FT /translation="MGLCISTRSYNSKVKPNSGIVDTSTLHTPTPPHNSIQTSRELSPV FT PMSSPTSRRTVITSTGVYFRSTEDLLEEVNRRLTMQLQKR" XX SQ Sequence 2731 BP; 731 A; 561 C; 568 G; 871 T; 0 other; accggatggc cgcgattttt tttttaaagt ggtccctacc actaacaaaa atcccccact 60 cagaacgctc cctcaaagtt aaattattaa gtggtcccct atttatactt attctccaag 120 tattatttta aacatgtggg atcctctttt gaacgagttt cctgaaactg ttcacggttt 180 taggtgtatg cttgccgtaa aatatcttca attagttgaa cagacatact ctcctgatac 240 ggttggtcac ggtcttatac gggatttaat ttcagtaatt cgtgctcgca attatgtcga 300 agcgtcccgc agatattgtc atttccactc ccgcctcgaa ggtacgtcgc cgtctgaact 360 tcgacacccc cgtgatgagc cgtgctgctg cccccactgt cctcgtcacc aacagaagaa 420 ggacatggac caacaggccc atgtaccgca agcccagact gtacagaatg tacagaaccc 480 ctgatgtgcc caaaggttgt gaaggtccat gtaaggtaca atcgtatgaa cagaggcacg 540 acatatccca tgttggtaag gtattatgtg ttagtgatgt cacccgtggt aatgggctta 600 cacatcgtgt tggtaagaga ttctgtgtga agtctgttta tgtgttaggt aaaatatgga 660 tggatgaaaa tattaaaact aagaaccata cgaacactgt gatgtttttt cttgttcgtg 720 acagaaggcc ctatggtact gctatggatt ttcgtcaggt gtttaacatg tatgataatg 780 agcccagtac tgctactatc aagaatgatc ttcgagatcg ttatcaagtt ttaaggaaat 840 tcagttcaac agtcacaggg ggtcaatatg cttctaaggg acaggcgttt gtggagaaat 900 ttatggagcc taacaattat gtggtttata accatcaaga agctgctaag tatgacaatc 960 atactgaaaa tgccctgtta ttgtatatgg cttgtactca tgccagtaat ccagtgtatg 1020 ctactttgaa gatcagaatc tatttctatg attctgttca gaattaataa agattgaatt 1080 ttattatatg agaatttgtt acatattctg tattttccaa tacatcccat aatacatgat 1140 cacatgctct aattacattg ttaatactaa ttacacccaa attatttaaa tatttcatac 1200 attgaaccct aaatactctt aagaaacgcc aagtctgagg ttgtaagcga gtccagatct 1260 ggaagatcag aaaacactgg tgtattccca acgctttcct caggttgtga ttgaactgta 1320 ttctgatcgt tatgatgtcg tggttggtgt tgagtggcct ctcgtggtgc ttgattatct 1380 tgaaatatag gggatttttg attgtccagg tatatacgcc actctcgcat tgagttgcag 1440 tgagtaattc ccctgtgcga aaatccatga tttgcacaat ctatgccgaa gtagtatgaa 1500 cacccgcacg ttagatcaac tctacgcctg cgaactggcc tcctcttcgc tatcctgtgc 1560 tgcactttga ttggtacctg agtacaatgg gttgttgagg gtgacgaatt ccgcattctt 1620 tatagcccac tcttttaatg ctgaattttt ttcttcgtcc aagcactctt tatatgatga 1680 tgttggtcct ggattgcaaa ggaagatagt tgggattcca cccttaattt gaattggttt 1740 cccgtacctg gtgttgcttt gccagtccct ttgggccccc atgaattctt taaagtgctt 1800 tagatagtgg gggtctacgt catcaatgac gttataccaa gcatcattac tgtacacctt 1860 tggactcaga tctagatgac cgcacagata attatgtggt cccagtgatc tggcccacat 1920 tgttttacca gtacgactct ctccctctat gacaatactt ttgggtctcc aaggccgcgc 1980 agcaccactc acattttcag aaacccactc ttcaagttct tctggaactt gatcaaatga 2040 agaagataaa aaaggacaaa caaatacctc taaaggaggt gcaaaaatcc tatctaaatt 2100 agtatttaaa ttatgaaatt gaaaaatata ttcttttgga agtttttccc taattattgc 2160 cattgctgcc tctttcgaac ctgcgtttaa cgcttctgca gctgcatcgt tagccgtctg 2220 ttgacctcct ctagcagatc ttccgtcgat ctgaaataca ccccagtcga cgtaatcacc 2280 gtccttctcg atgtaggact tgacatcgga actggactta gctccctgga agtttggatg 2340 gaattgtgtg gaggtgttgg ggtgtgtaag gtcgaagtgt cgactattcc tgaattgggc 2400 tttacctttg aattgtatga gcgcgtggag atgcagagtc ccatctgagt gttttttttg 2460 tgcaactctg ataaataatt tatcagaagg gcactgtata tttttaataa gctctaaggc 2520 ttcttctttg ggaattgggc atttcggata agtgaggaag atattttcgg cttttacttg 2580 aaatgaactt gaacgaggca ttttgactaa gtcaattggg tgctctcaaa cttctctgga 2640 atggggtgct ttgggtgctt atttatacgg agcccccaaa agaaattcaa actttaattt 2700 gaaatccaca agcggccatc cgtataatat t 2731 //