ID   AF314144; SV 1; circular; genomic DNA; STD; VRL; 2748 BP.
XX
AC   AF314144;
XX
DT   04-JUL-2001 (Rel. 68, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 8)
XX
DE   Ageratum yellow vein Sri Lanka virus segment A, complete sequence.
XX
KW   .
XX
OS   Ageratum yellow vein Sri Lanka virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2748
RA   Tsai W.S., Ariyaratne I., Green S.K.;
RT   ;
RL   Submitted (16-OCT-2000) to the INSDC.
RL   Plant Pathology-Virology, Asian Vegetable Research and Development Center,
RL   P. O. Box 42, Shanhua, Tainan, Taiwan, Republic of China
XX
DR   MD5; 0fd1870776cfb49a306f0fea0bacabe4.
DR   EuropePMC; PMC3126389; 21378048.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2748
FT                   /organism="Ageratum yellow vein Sri Lanka virus"
FT                   /segment="A"
FT                   /mol_type="genomic DNA"
FT                   /country="Sri Lanka"
FT                   /note="collected in February 1999"
FT                   /db_xref="taxon:222079"
FT   CDS             129..476
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="pre-coat protein"
FT                   /db_xref="GOA:Q91BQ5"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q91BQ5"
FT                   /protein_id="AAK70850.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVENTYSPDSLGYDLIRDL
FT                   ISVIRAKNYVEATSRYNHFHSRIEGASPSQLRDPVHEPCSCPHCPRHKVTSMGQQAHES
FT                   ETQNIQNVQKS"
FT   CDS             289..1059
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q91BQ4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q91BQ4"
FT                   /protein_id="AAK70851.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFETPYTSRVAVPTVRVTKSRAWA
FT                   NRPMNRKPRIYRMYRSPDVPRGCEGPCKVQSFESRHDISHIGKVMCISDVTRGIGLTHR
FT                   VGKRFCVKSVYVLGKVWMDESIKTKNHTNSVMFFLCRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVFRDRYQVLRKWHATVTGGTYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMASTHASNPVYATLKIRIYFYDSVSN"
FT   CDS             complement(1056..1460)
FT                   /codon_start=1
FT                   /gene="C3"
FT                   /product="C3"
FT                   /db_xref="GOA:Q91BQ3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q91BQ3"
FT                   /protein_id="AAK70854.1"
FT                   /translation="MDSRTGEYINAAQAENGVYIWEIQNPLYFKITEHHNRAFLQNHDI
FT                   ITMQIQFNHNLRKALGIHKCFLIFRIWMTSQPQTGRFLRVFKNQALKYLDSLGVISLNN
FT                   VIRAVDHVLWDVLHHILYVEQSHSIKFNIY"
FT   CDS             complement(1201..1605)
FT                   /codon_start=1
FT                   /gene="C2"
FT                   /product="C2"
FT                   /db_xref="GOA:Q91BQ2"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q91BQ2"
FT                   /protein_id="AAK70853.1"
FT                   /translation="MRPSSPSKSHSTQVPIKVQHRLAKKSNRRRRVDLPCGCSYFIALA
FT                   CHNHGFSHRGVHQCSSSREWRVYLGDTKSPLFQDNGAPQPRIPSESRHNHNADPIQSQP
FT                   EEGIGDSQVFSNLPNLDDFTTSDWSFLKGL"
FT   CDS             complement(1508..2593)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:Q91BQ1"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q91BQ1"
FT                   /protein_id="AAK70852.1"
FT                   /translation="MAATNRFKINAKNYFLTYPKCSLTKEEALSQLLNLETPTSKKFIR
FT                   ICRELHEDGTPHLHVLIQFEGKFQCRNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM
FT                   EKDGDILDHGVFQVDGRSARGGCQSANDAYAEAINSGSKAQALNILKEKAPKDFVLQFH
FT                   NLNSNLDRIFTPPMEVYVSPFLSSSFDQVPEELEEWACENVVSAAARPIRPISIVIEGD
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALKNWALKNATFVTLEEPL
FT                   YSGTHQSPTQVSEEEQQTSEG"
FT   CDS             complement(2143..2436)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q91BQ0"
FT                   /protein_id="AAK70855.1"
FT                   /translation="MGLLTCMFSSSSKENSSAGTIDSSTLPPQPGQHISIRTFRELKAQ
FT                   VMLKPTWRKTETSLIMEFSKSMEDQLEEVANLPTTHMPRQSIQGQKHRPSIY"
XX
SQ   Sequence 2748 BP; 723 A; 538 C; 634 G; 853 T; 0 other;
     accggatggc cgcgattttt tttaaagtgg tccccagagc acgtggtcca ataatagacg        60
     ctccttaaag cttaattaat ggcttgtggg cctatatact tgcccaccaa gtagtgggat       120
     ttgtcatcat gtgggatcct cttttaaacg agttccccga tacggttcac ggattccggt       180
     gtatgcttgc tgtaaaatac ttacagctcg tagaaaatac gtattcacct gattcgttgg       240
     gttacgatct aattcgtgat ttaatctcag ttattagggc taagaattat gtcgaagcga       300
     ccagcagata taatcatttc cactcccgca tcgaaggtgc gtcgccgtct caacttcgag       360
     accccgtaca cgagccgtgt agctgtcccc actgtccgcg tcacaaagtc acgagcatgg       420
     gccaacaggc ccatgaatcg gaaacccaga atatacagaa tgtacagaag tcctgatgtt       480
     cccagaggat gcgaaggccc atgtaaggtt cagtcgttcg agtctagaca tgacatatcc       540
     catattggga aggtaatgtg tattagtgat gtcacccgtg gaattgggct aactcatagg       600
     gtcggtaaga ggttttgtgt taagtccgta tatgtattgg gcaaggtgtg gatggatgag       660
     agtatcaaaa ctaagaatca cacgaatagt gtgatgtttt ttttgtgtcg tgacaggagg       720
     cctgttgaca aaccccagga ttttggtgag gtgtttaata tgtttgataa tgagcccagt       780
     actgcaactg tgaagaatgt ttttcgtgat cgctaccaag tattgaggaa atggcacgca       840
     actgtcactg gtggaaccta tgcgtccaag gagcaggctt tggttaagaa gtttgttagg       900
     gttaataatt atgttgttta taaccagcaa gaggctggga agtatgagaa tcatagtgag       960
     aatgctttga tgttgtatat ggcgtctacg cacgcctcta atcctgtgta tgctacattg      1020
     aagatacgga tctattttta tgattctgta tctaattaat aaatattgaa ttttattgaa      1080
     tgtgattgtt caacgtacaa aatgtgatgc aatacatccc ataaaacatg atctactgct      1140
     ctaattacat tgtttaaact aataacccct aaactatcta aatatttaag tgcttggttc      1200
     ttaaagaccc ttaagaaacg accagtctga ggttgtgaag tcatccagat tcggaagatt      1260
     agaaaacact tgtgaatccc caatgccttc ctcaggttgt gattgaattg gatctgcatt      1320
     gtgattatgt cgtgattctg aaggaatgcg cggttgtggt gctccgttat cttgaaataa      1380
     aggggatttt gtatctccca gatatacacg ccattctctg cttgagctgc attgatgtac      1440
     tcccctgtgc gagaatccat ggttatgaca ggctagggct atgaagtatg agcatccaca      1500
     gggtagatca accctccgac gtctgttgct cttcttcgct aacctgtgtt ggactttgat      1560
     gggtacctga gtagagtggc tcttcgaggg tgacgaaggt cgcattcttc agagcccagt      1620
     ttttaagcgc actgtttttc tcttcatcca gatactcttt atagcttgaa ttgggtcctg      1680
     gattgcagag gaagatagtg ggaattccgc ctttaatttg aacaggtttc ccgtacttgg      1740
     tgttgctttg ccagtctctt tgggccccca tgaactcttt aaagtgcttt agatagtgcg      1800
     gatcgacgtc atcaatgacg ttataccagg catcattact gtacactttt ggactcaggt      1860
     cgagatgacc gcacaaataa ttgtgtggtc ctagtgacct ggcccacatt gtttttccgg      1920
     tacgactatc accctcaatt acaatactaa tgggcctgat aggccgcgca gcggcactga      1980
     caacgttttc acatgcccac tcttcaagtt cttctggaac ttggtcgaaa gaagaagata      2040
     aaaaagggga aacataaacc tccattggag gtgtaaaaat cctatctaaa tttgaattta      2100
     agttatgaaa ttgtaaaaca aaatctttgg gagctttctc ttttaatata ttgagggcct      2160
     gtgcttttga ccctgaattg attgcctcgg catatgcgtc gttggcagat tggcaacctc      2220
     ctctagctga tcttccatcg acttggaaaa ctccatgatc aaggatgtct ccgtctttct      2280
     ccatgtaggt tttaacatca cttgagcttt tagctccctg aatgttcgga tggaaatgtg      2340
     ctgacctggt tggggaggta aggtcgaaga atctattgtt cctgcactgg aattttcctt      2400
     cgaactggat gagaacatgc aagtgaggag tcccatcttc gtgaagctct ctgcagattc      2460
     taatgaattt tttagaagtt ggggtttcga gatttaataa ttgggaaagt gcttcttctt      2520
     tagttagaga gcacttggga taagtgagaa aataattttt ggcatttatt ttaaaccgat      2580
     tggtggctgc catgttgact aagtcaatcg gtgtctctca atcttttcta tgtatcggtg      2640
     tatcggagtc ctatatatat ggagactcta atggcataat tgtaatttgg taaagtgtgc      2700
     tttaattcaa aatcctcacg ctccaaaagc ggccatccgt ataatatt                   2748
//