ID AF284502; SV 1; linear; genomic RNA; STD; VRL; 3877 BP. XX AC AF284502; XX DT 02-OCT-2000 (Rel. 65, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Grass carp hemorrhagic virus segment L2 inner capsid protein VP2 gene, DE complete cds. XX KW . XX OS Grass carp hemorrhagic virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3877 RA Qiu T., Lu R., Zhang J., Zhu Z.; RT "Complete nucleotide sequence of grass carp reovirus segment L2"; RL Unpublished. XX RN [2] RP 1-3877 RA Qiu T., Lu R., Zhang J., Zhu Z.; RT ; RL Submitted (05-JUL-2000) to the INSDC. RL Department of Fish Genetics and Breeding, Institute of Hydrobiology, RL Chinese Academy of Sciences, Luo Jia Shan, Wuhan, Hubei 430072, P. R. China XX DR MD5; 401127a5bd582171c19ac112431efd1a. DR EuropePMC; PMC2615760; 19091125. XX FH Key Location/Qualifiers FH FT source 1..3877 FT /organism="Grass carp hemorrhagic virus" FT /segment="L2" FT /strain="873" FT /mol_type="genomic RNA" FT /db_xref="taxon:128986" FT CDS 13..3837 FT /codon_start=1 FT /product="inner capsid protein VP2" FT /db_xref="GOA:Q9E168" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR012915" FT /db_xref="UniProtKB/TrEMBL:Q9E168" FT /protein_id="AAG17718.1" FT /translation="MEELFNALPQPLQQLSLALAGEIPLTDHIFEQAASTWHVQPRSLT FT YKLLDHIPFATPVVVPPPIYHSLDWSKCFAVNQDRVERIPTIDDPDDVYVPNSDIGPLL FT TSLHTIPDYGFLHPTIENDATTLRAERARCASTFYKIASSQARQVKLDPIRMLGFLLLV FT QARPRVPSGLVTDQPTRRDPTLSPALHAIWQVMQYYKVAGVYYAPALVVPSGAIWWIPP FT PGKRNVVSVQYLLTDLINLAILAHMTDMSPTLELTGVLMYLRAASSHSYAYTLLQMKSV FT FPALSLRSMYRNKGFGGKAPAIEWTEPRSKYKFRWTGVTQLHDGLRPRSPSMDVPTLET FT LAKYELVDIGHTIIRERNAHPQHNHDSVRFVRDVMALASGMYLVRQPTMSVLREYSQVP FT DIKDPIPPSAWTGPIGNVRYLLPSVQGPARHLYDTWRAAARQIAQDPQWHDPLNQAIMR FT AQYVTARGGSSASLKFALKVTGIVLPEYDDSKVKKSSKIYQAAQIARIAFMPLIAAIHA FT EVTMGIQNQVQRRARSIMPLNVIQQAISAPHTLVANYINKHMNLSTTSGSVVTDKVIPL FT ILYASTPPNAVVNVDIKACDASITYNYFLSVICGAMHEGFEVGNADAAFMGVPSTIVSD FT RRSPVAPYSRPISGLQTMVQHLADLYAAGFRYSVSDAFSSGNKFSFPTSTFPSGSTVTS FT TEHTANNSTMMEYFLNVHAPSHVKSASLKRILTDMTIQRDYVCQGDDGILLLPHEAASK FT ISADDMNELLTCLCDYEQLFGWNYDIDWSDTAEYLKLYALMGCRIPNTSRHPPVGKEYA FT APQTDEIRPSLIDIVIGHHLNGVTDVLNWREWLRFSWAFACYSSRGGYTNPRGQSFSAQ FT YPWWTFVYLGIPPILLPGPTPFIHSCYMPPGDQGMFSILNGWRDWLISHASTTLPPLRH FT NHPVCGLSDVPSLLSQFGVYAGYHAAQHYRRPKPAPETASSDSINQITSDLTEYLFYDS FT ALKARVMKGRYNWERLSSSLSLNVGSRVPSLFDVPGKWVAAGRDAEKPPPSSVEDMFTS FT LNRCIRRPTHSFSRLLELYLRVHVALGESIPLAIDPDVPQVAGADPANDDHWFKYTCLG FT DIPSATRNYFGESLFVGRVVSGLDVEAVDATLLRLKILGAPPEAFIAVLNGIGMSDSEA FT HQIAGRISLANAQLVQIARVVHLSIPSSWMTLNTGPYIHHHAYDFKPGITQPSAKSRDK FT SIWMSPILKLLCTSYAMTIAGPVRTTIVTEIDGSAAALSGNLRVWMRDV" XX SQ Sequence 3877 BP; 844 A; 1204 C; 834 G; 995 T; 0 other; gttatttgta ccatggagga attgttcaac gccctacctc aaccactaca acaactctca 60 ttagctctgg ccggtgagat accattgaca gatcacattt tcgaacaagc agcttccacc 120 tggcacgtcc agccacgatc actcacctat aagttattag atcatattcc atttgctact 180 cccgttgtag ttccccctcc catataccat tcattagact ggagtaagtg cttcgccgtt 240 aaccaagatc gtgtagagcg cattcccacc atagacgacc cagacgatgt gtacgttccg 300 aactccgaca tcggccccct cctcacttca ttacatacca ttcccgacta cgggttcctg 360 cacccaacaa tcgagaacga tgccaccact ctgcgcgcgg aacgtgctcg gtgtgcttcc 420 actttctaca agattgcctc ctcccaagct cgtcaagtta agctggatcc cattcgcatg 480 ctaggtttcc tacttctggt gcaagctcgt cctcgcgtcc cctcaggcct agttacagat 540 caacccactc gtcgcgaccc cacgctgtca cccgcccttc acgctatttg gcaggtaatg 600 cagtattaca aggttgccgg cgtgtactac gcccctgctc tggtcgtccc atctggcgcc 660 atatggtgga ttccccctcc cggtaagcgc aatgttgtct ccgtccaata cctgctaact 720 gacctgatta acttagcaat cctggctcac atgaccgaca tgtcccccac cttggagctt 780 accggcgtcc tgatgtacct cagagccgct tcctctcata gttacgccta caccttactt 840 caaatgaaga gcgtattccc agccttgtcc ttgcgctcca tgtatcgtaa caaggggttt 900 ggcggtaaag cacccgcaat agagtggacc gaaccgcgct ctaaatataa attccgatgg 960 actggcgtca ctcaattaca cgatggcctc cgaccgcgtt ctccgtctat ggacgttcct 1020 acacttgaga ctttggcgaa atacgaacta gtcgacatag gtcataccat cattcgagaa 1080 cgcaacgctc atcctcaaca taatcacgac tccgtccgat tcgtccgcga cgtgatggct 1140 cttgccagcg gcatgtatct cgtgcgtcaa cccaccatgt ctgtgcttcg cgagtactcc 1200 caagtccctg acatcaagga tcccattccg ccttcagctt ggaccggacc tattggcaac 1260 gtccgatacc tcttgccatc tgtccaagga ccagcgcgtc atttatacga cacgtggcga 1320 gccgctgccc gtcaaatagc ccaagaccct caatggcacg atcctctaaa ccaagccatc 1380 atgcgggctc aatacgtaac cgcccgagga ggttccagcg cgtcgctgaa attcgccctt 1440 aaagttacag gtatcgtgtt acctgaatac gacgattcca aggtcaagaa gtcctccaaa 1500 atatatcaag ccgcacaaat cgctcgtatc gcatttatgc ccctaatcgc tgccatccac 1560 gctgaagtca cgatgggtat tcaaaatcaa gtgcaacgtc gagcacgctc catcatgcct 1620 ctcaatgtca ttcagcaagc catctccgcg cctcatacct tagtcgccaa ctacatcaat 1680 aaacacatga acctctccac cacctccggt agtgttgtta ctgataaggt catccctctc 1740 attctctacg cctccacccc ccccaacgct gtcgtcaacg tcgatattaa agcttgcgac 1800 gcctccatca cttacaatta cttcctttcg gttatttgcg gagctatgca tgaaggtttc 1860 gaggtcggta acgctgacgc tgcgttcatg ggagttccct ctaccatagt atcggatcgc 1920 aggagtcccg ttgctcccta ctctagacca atttcaggtt tgcagaccat ggtgcagcat 1980 ttagctgatc tgtacgctgc tggcttccgc tattccgtct ctgacgcttt ctctagtggc 2040 aataaattct ctttccccac gtccactttt ccctccggct ccactgtcac ctccaccgag 2100 cacaccgcca ataacagcac gatgatggag tatttcctca atgtgcacgc cccgtcgcac 2160 gttaagtccg cctctctcaa gcgtatcctc actgacatga ctattcagag agactacgtc 2220 tgccagggag acgacggtat attgctactg cctcacgagg ccgcgtccaa gatctctgct 2280 gatgatatga atgaattact tacgtgtctg tgcgattatg aacagctgtt cggctggaat 2340 tatgacatcg actggtctga caccgctgag tacctcaaac tgtatgctct catgggttgc 2400 cgcatcccca acactagccg acatcccccg gtcggtaaag aatacgcggc tcctcagacg 2460 gatgaaatca ggcccagctt gattgacatt gtgattggtc atcatctcaa cggcgtcact 2520 gatgtgttga attggcggga atggctgcgt tttagttggg ctttcgcttg ttactcctca 2580 cgaggcggct atactaatcc taggggccaa tcattctctg cacagtatcc ctggtggact 2640 ttcgtgtatc tcggcattcc accgattctg ttacccggtc caacgccttt catccattcg 2700 tgctacatgc cccccggtga ccaaggaatg ttctccatcc ttaacggttg gcgtgattgg 2760 ctcatatccc atgcttccac aacgctccca cctttgcggc acaaccatcc cgtttgcggc 2820 ctatcggacg ttccgtcact cctttcccaa tttggagtgt atgccggtta ccatgcggct 2880 caacactatc gacggcccaa gcctgcgcct gagacggcct catctgactc cataaatcag 2940 atcacgtctg atctcacgga gtacctcttt tacgactccg cccttaaagc tcgggtcatg 3000 aagggcagat ataactggga acggctttcc tcgtcgctgt ccttgaacgt tgggtctcgt 3060 gtgccgtcgc tcttcgacgt acctggtaag tgggttgctg ctggccgtga cgccgagaaa 3120 ccgccaccgt cgtctgtcga ggacatgttc acgtcactca atcgatgtat ccggcgaccc 3180 acccattcct tctcccgctt gcttgaatta tacttgcgag ttcacgtagc gctcggtgag 3240 tccattccat tagccataga cccggacgta ccgcaagtcg ctggcgccga tcccgctaat 3300 gacgatcact ggtttaagta tacttgcctt ggtgatatcc catctgccac ccgcaattac 3360 tttggtgaat ctctcttcgt gggccgagta gtttcaggat tggatgtcga agcggtcgat 3420 gccaccttgt tacgattgaa gatcttgggc gccccccccg aagcgttcat cgctgtactg 3480 aatggtatcg gtatgtcgga ctcggaagcc caccaaatcg ccggacgtat ctccctagct 3540 aatgctcaac tcgtccagat agcacgagtc gtacacctct ccataccctc ctcgtggatg 3600 accctcaata ctggtccgta cattcatcat cacgcctatg actttaaacc tgggattact 3660 caaccgtcag ctaaatcacg tgacaagtca atctggatgt cgccgatact aaaattatta 3720 tgcactagct acgccatgac catcgcgggc cccgtgcgta ccaccatcgt taccgagata 3780 gatgggtcgg cagccgctct cagtggtaac ttgcgggtct ggatgcgtga tgtttagtgg 3840 ttgacctttg gcgtccttcc tggtgcatca cttcatc 3877 //