ID   AF239175; SV 1; linear; genomic RNA; STD; VRL; 2039 BP.
XX
AC   AF239175;
XX
DT   02-OCT-2000 (Rel. 65, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 3)
XX
DE   Grass carp hemorrhagic virus segment M6 outer capsid protein VP5 gene,
DE   complete cds.
XX
KW   .
XX
OS   Grass carp hemorrhagic virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RP   1-2039
RX   DOI; 10.1007/s007050170099.
RX   PUBMED; 11556714.
RA   Qiu T., Lu R.H., Zhang J., Zhu Z.Y.;
RT   "Molecular characterization and expression of the M6 gene of grass carp
RT   hemorrhage virus (GCHV), an aquareovirus";
RL   Arch. Virol. 146(7):1391-1397(2001).
XX
RN   [2]
RP   1-2039
RA   Qiu T., Lu R., Zhang J., Zhu Z.;
RT   ;
RL   Submitted (19-JUL-2000) to the INSDC.
RL   Department of Fish Genetics and Breeding, Institute of Hydrobiology,
RL   Chinese Academy of Sciences, Luo Jia Shan, Wuhan, Hubei 430072, China
XX
DR   MD5; 37074fc1c835b9edd9f6d2db6512fa18.
DR   EuropePMC; PMC4152834; 11832217.
DR   EuropePMC; PMC5123877; 16297481.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2039
FT                   /organism="Grass carp hemorrhagic virus"
FT                   /segment="M6"
FT                   /strain="873"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:128986"
FT   CDS             31..1977
FT                   /codon_start=1
FT                   /product="outer capsid protein VP5"
FT                   /db_xref="GOA:Q9E6U3"
FT                   /db_xref="InterPro:IPR009113"
FT                   /db_xref="InterPro:IPR015960"
FT                   /db_xref="InterPro:IPR015962"
FT                   /db_xref="InterPro:IPR036256"
FT                   /db_xref="UniProtKB/TrEMBL:Q9E6U3"
FT                   /protein_id="AAG17823.1"
FT                   /translation="MWNVQTSVNTYNITGDGNSFTPTSDMTSTAAPAIDLKPGVLNPTG
FT                   KLWRPVGTSVATIDSLAIVSDRFGQYSFVNEGMRETFSKALFDINMWQPLFQATKTGCG
FT                   PIVLSSFTTTTSGYVGATAGDALDNPVTNGVFISTVQIMNLQRTIAARMRDVALWQKHL
FT                   DTAMTMLTPDISAGSASCNWKSLLAFAKDILPLDNLCLTYPNEFYNVAIHRYPALKPGN
FT                   PDTKLPDAQAHPLGEVAGAFNAATSEVGSLVGSSSTLSQAISTMAGKDLDLIEADTPLP
FT                   VSVFTPSLAPRSYRPAFIKPEDAKWIAEFNNSSLIRKTLTYSGATYTVQLGPGPTRVID
FT                   MNAMIDSVLTLDVSGTILPYDTSPDLSTSVPAFVLIQTSVPIQQVTTAANITAITVVSA
FT                   AGASAINLAINVRGQPRFNMLHLQATFERETITGIPYIYGLGTFLIPSPTSSSNFSNPT
FT                   LMDGLLTVTPVLLRETTYKGEVVDAIVPATVMANQTSEEVASALANDAIVLVSNHLNKL
FT                   ANVVGDAIPVASKTDDSATSAIVSRLAVQHKLSQVGQASPTPPDYPLLWRRAKRAASMF
FT                   VSNPSLALQVGIPVLTQSGMLSALTSGVGTALRTGSLGKGVTDASEKLRARQSLTVAKQ
FT                   AFFDQIGNLWPGK"
XX
SQ   Sequence 2039 BP; 445 A; 669 C; 441 G; 484 T; 0 other;
     gttatttcga cacttcgcac tctctctaca atgtggaacg ttcaaacctc cgtcaacact        60
     tacaatatta ctggggatgg taattcattt acccccacct ctgacatgac atccaccgcc       120
     gccccggcca ttgacctcaa acctggggtt ctcaatccta ccggtaagct atggcgaccc       180
     gtcggtacct ctgttgctac catcgactca cttgccatcg ttagcgatcg ttttggtcag       240
     tattcatttg tcaatgaagg catgcgagag accttttcaa aagcgctctt cgacatcaac       300
     atgtggcaac ctttattcca agcgacaaag actggctgcg gaccgattgt actctcctcc       360
     ttcacaacca ccacctccgg ttatgttggc gccactgccg gtgatgccct tgacaaccct       420
     gtaacgaatg gcgttttcat cagtactgtg caaatcatga accttcagcg gaccatcgct       480
     gcccgcatgc gtgacgtcgc tctctggcag aaacacttag acaccgccat gaccatgcta       540
     acacctgaca tttctgccgg tagcgcctcc tgcaactgga agagcttgct cgcttttgcg       600
     aaggatatcc tccccctcga caacctgtgc ctcacctacc caaatgagtt ctacaacgtt       660
     gccatccacc gttatcccgc actcaagcct ggtaacccag acaccaagct tcccgatgcc       720
     caggctcatc cgctgggaga agtagccggt gcgttcaatg ccgccacctc tgaagttggg       780
     agtctcgttg gttccagctc caccctctca caggccatct ccaccatggc tggcaaagac       840
     ctcgatctaa ttgaagccga cactccgctc cccgtgagcg tatttactcc atctctcgcc       900
     cctcgttctt atcgacccgc cttcattaaa cctgaggatg ctaagtggat cgcggaattc       960
     aataactcat ccctcatacg taagactctt acctactcgg gtgcaactta caccgttcaa      1020
     ctcggccctg gtccaactcg cgtcattgat atgaatgcga tgatcgactc cgtgttgacc      1080
     ctggatgtga gcggtaccat cctcccatat gacacaagcc ctgatctgtc tacttcagtc      1140
     ccggctttcg tcctcatcca gacctcagta ccaattcaac aagtcactac cgctgctaac      1200
     atcacagcca tcaccgtcgt atccgccgct ggcgcttccg ccatcaatct cgctatcaat      1260
     gtacgcggcc agccccgctt caacatgctc cacctgcaag ccacctttga gcgcgagaca      1320
     atcaccggga tcccgtatat ctatggcttg ggcacattcc tcatcccatc acccacatcc      1380
     tcctccaatt tctccaaccc cacgctgatg gacggccttc tcactgtcac ccccgtactg      1440
     ctacgtgaga cgacatacaa gggcgaagtc gttgacgcta tcgtaccagc taccgtcatg      1500
     gccaaccaaa cgtctgagga ggtcgcctct gccttagcca acgacgcgat cgtgttagtg      1560
     tcgaatcatc tcaacaagtt ggccaatgtc gtaggagacg cgattcccgt cgcctcaaaa      1620
     acggatgatt ccgcgactag cgccatcgtc agtcgactcg ccgtccagca caagctgtca      1680
     caggtaggcc aagcctcacc cactcccccc gattatccac ttctgtggcg ccgtgccaag      1740
     cgtgccgcgt ctatgttcgt ctccaacccc tccctggcct tgcaggtagg tatccctgtg      1800
     ttaactcaat cgggtatgct ttccgcccta acgtctggcg taggcacggc tttacgtact      1860
     ggtagcttgg gcaaaggtgt aaccgatgcg tcagaaaaac tacgtgcacg tcagagtttg      1920
     acggttgcga agcaagcgtt cttcgaccag atagggaact tgtggcccgg caagtgaggg      1980
     gtgggttgac aacccccttc catgcccgcg tgaacggcgg gaagtgtcgt actttcatc       2039
//