ID AF235165; SV 1; linear; genomic RNA; STD; VRL; 2404 BP. XX AC AF235165; XX DT 09-MAR-2001 (Rel. 67, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 4) XX DE American plum line pattern virus segment RNA2, complete sequence. XX KW . XX OS American plum line pattern virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2404 RA Scott S.W., Zimmerman M.T.; RT "American plum line pattern virus is a distinct ilarvirus"; RL Acta Hortic. 550:221-225(2001). XX RN [2] RP 1-2404 RA Zimmerman M.T., Scott S.W.; RT ; RL Submitted (16-FEB-2000) to the INSDC. RL Plant Pathology & Physiology, Clemson University, P.O. Box 340377, Clemson, RL SC 29634-0377, USA XX DR MD5; 0adbacd5abd60d9de200eb68ebe72032. DR EuropePMC; PMC5491605; 28713347. XX FH Key Location/Qualifiers FH FT source 1..2404 FT /organism="American plum line pattern virus" FT /segment="RNA2" FT /mol_type="genomic RNA" FT /note="complete sequence of RNA2" FT /db_xref="taxon:134632" FT CDS 12..2234 FT /codon_start=1 FT /product="putative polymerase p2" FT /db_xref="GOA:Q997A3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q997A3" FT /protein_id="AAK15028.1" FT /translation="MDFLRVPLIENYLSFDGVVRSTLEKLLPYEPPVVVNPLAQRVLLG FT MNCLLGCYRANADKPIMFWIVPMLRLATVSRGFKSITVCFQNWWNIMTILQLRLESWRR FT CSSHKTVWDTYDVAVANMNFTPEFADMFFFSLEVDLCDDECIEVEDGGHPETVDVLPCE FT MPLFEADTSSLGVGREKRVVSVPEPCWFEETFSLDRDVQVSSLNLQFDNTVVKQVVKYV FT PDNSPVLGSPFQGFNSGCVSDAIEEVLPHHTLSDDRFDQVWVEACDIYLDFQGSLDLSK FT FNDVDPNLNCWEPVYNTGLPSTRYTSQREAVLAIKKRNLNVPTLTDCCDVDALSTEVVD FT KFFSTFIDLEKFASFPNDLLGVGWFLDDYLKRKQVPEDLYLQELSMLSVDKYRHMIKSQ FT LKPPLEDVLHLERALPATITYHTKDKVAASTPFFLAISAKLLNVLNSKVVIPSGKDHQL FT FSIDPYIFKEVKFWKEIDYSKFDKSQGRLHHEIQRKLFRRLHSNPDYDNFIETWFSAHM FT RSKIYDRDAGVGFSTDYQRRTGDACTYLGNTLVTLCTLSYIYDLTSPNVGLVVASGDDS FT LIGTIKHLLPRDKEQFCSTLFNFETKFPHNQPFICSKFLVLDQLENGGERVNAYPDPYK FT LLIRVGVKFMTNTKFESWAESFFDSFSCYSTIESVSKVVEMAGYRYIRNSPKFLLPALH FT HLKYLCRSRDALRAGLFGKEYSSAHCRNSRTRSDTTTKTVKKRGKR" XX SQ Sequence 2404 BP; 618 A; 467 C; 568 G; 751 T; 0 other; gtcttttcag catggatttt ctccgtgtac cattaattga aaattacctt tctttcgacg 60 gggtcgttcg ttcgaccctt gagaaattgc tcccttatga accacctgtt gttgtcaatc 120 cgttggctca acgagttcta cttgggatga attgcttgct aggttgttac cgcgcaaatg 180 cagacaaacc aattatgttt tggattgtcc cgatgttacg tctggctacg gtgagtcgtg 240 ggttcaagag tattaccgtc tgtttccaga attggtggaa tataatgacg atactccagt 300 tgagactgga aagttggaga cgatgttcct ctcataaaac agtctgggac acctatgatg 360 tcgcagttgc caatatgaat ttcacacctg agttcgctga tatgttcttc ttttcacttg 420 aggtggactt atgtgatgac gaatgtattg aagttgagga cggaggtcac ccggagacgg 480 ttgacgttct tccttgtgag atgcctttgt ttgaggcaga tacttcttcc ctcggtgtcg 540 ggagggaaaa gagagttgta tcagttcctg aaccgtgttg gtttgaggaa accttctctt 600 tggaccgaga cgttcaagtt tcgagtctga atctacaatt cgacaatact gtcgtgaagc 660 aggttgtcaa atatgtgcca gacaattcgc cagtactcgg gtcccctttt caagggttta 720 attccgggtg cgtgtctgat gccatcgaag aggtgttacc gcatcacact ctctccgatg 780 atagattcga tcaagtttgg gtcgaggcgt gtgatatata cctagacttc caaggttctt 840 tggacctgtc gaaatttaac gatgttgacc ccaatttgaa ttgttgggaa cctgtgtata 900 acaccggttt accgtcaact cgttatacct ctcagcgaga agccgtttta gcaataaaga 960 aacggaattt gaacgtaccg acgttgaccg actgttgtga tgtcgatgca ttgtcgactg 1020 aagtagtcga taagttcttt tcgactttta ttgatctcga aaaatttgcc tcatttccca 1080 atgatttgct gggtgtggga tggttcttag acgattattt aaaaagaaaa caagtgcctg 1140 aggatttata tcttcaagaa ctttcgatgc tgtcagttga taagtacagg catatgatta 1200 agtcgcaatt gaaacctccc cttgaggatg ttttgcatct cgaaagggct ttgcctgcga 1260 ctattactta tcatactaaa gacaaagtgg cggcttcgac cccctttttc ttggcgattt 1320 cagcgaaatt gctaaatgtc ctgaattcta aagtcgtgat tcccagtgga aaagaccacc 1380 aattattttc aattgatcct tatattttta aggaagtgaa attttggaaa gagatagact 1440 attcaaaatt tgacaaatca cagggacgac ttcaccatga gattcagagg aagcttttta 1500 ggaggctgca ttcgaacccc gattacgata attttatcga aacgtggttt tccgctcata 1560 tgaggagtaa gatctacgac agggatgctg gagtaggttt ttccaccgat tatcaacgaa 1620 gaaccggtga tgcgtgcact tacttgggaa acactttggt aactttgtgc acattgtcat 1680 atatttatga tttaacaagt cctaatgtgg gcttagtcgt tgcatcggga gatgacagtt 1740 tgatcggtac gattaaacat cttttgcctc gcgataagga acagttttgt tcgactttgt 1800 tcaattttga gacaaagttt cctcacaatc aacctttcat ttgtagtaaa tttctggtcc 1860 tcgatcagtt agaaaatgga ggtgagagag tgaatgccta ccccgatccc tataagcttt 1920 taattagggt gggggtgaag tttatgacaa acacgaagtt tgagtcttgg gcagaatctt 1980 tttttgattc gttctcgtgt tactcgacaa tagagtctgt gtcgaaagtt gtggaaatgg 2040 cggggtatag atatattagg aatagtccta aatttctgtt acccgcttta caccatttaa 2100 agtacctgtg tcgcagtcgt gatgcactgc gtgcgggtct ttttggtaaa gagtattcct 2160 cagcgcattg taggaatagt cggacgaggt ccgacactac tacaaaaacg gtgaagaagc 2220 gggggaaacg ttagtgaccc cggtttacta gtccattgga ctaatggaaa tcccattggg 2280 tcgttgactt tgtcaacgag ttaactacga tgtcggccct aggacatcta tcgagctaac 2340 gacgatcgct ttgcgattat gcttcatttt tcctttcggg aaaatgaaat gacccttagg 2400 ggcc 2404 //