ID AF150731; SV 1; linear; genomic RNA; STD; VRL; 3044 BP. XX AC AF150731; XX DT 03-JUN-1999 (Rel. 59, Created) DT 03-JUN-1999 (Rel. 59, Last updated, Version 1) XX DE Cucumber mosaic virus segment RNA2 2a protein and 2b protein genes, DE complete cds. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3044 RA Hellwald K.-H., Glenewinkel D.; RT "A new genotype within cucumber mosaic virus subgroup I: Molecular RT characterization of the polymerase encoding RNA2"; RL Unpublished. XX RN [2] RP 1-3044 RA Hellwald K.-H., Glenewinkel D.; RT ; RL Submitted (12-MAY-1999) to the INSDC. RL Institute of Phytomedicine, University of Hohenheim, Otto Sander Str. 5, RL Stuttgart 70599, Germany XX DR MD5; b20b3c1c1da77d33d8797f55c9ce0990. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3044 FT /organism="Cucumber mosaic virus" FT /chromosome="segment RNA2" FT /strain="MB-CMV" FT /mol_type="genomic RNA" FT /db_xref="taxon:12305" FT CDS 76..2652 FT /codon_start=1 FT /product="2a protein" FT /note="RNA polymerase homolog" FT /db_xref="GOA:Q9WA71" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9WA71" FT /protein_id="AAD35092.1" FT /translation="MAFPAPTFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPSEEVSVEFVSYGAEDYLEKSDDELLIAFETMVKP FT MRIGQLWCPEFDKCLFISSVAMARALLLAPRTSPRTMKCFEDLVAAIYTKSDFYYDDEC FT ETDDVQIDISSRDVPGYSFEPWSRSSGFEPPPICEACDMIMYQCPCYDFNALKKSCTER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVAIPPDLNRATDRVDIN FT LVQSICDSTLPTHNSYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKPVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALVERFQRCLRGRIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSILPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSLFFELKYRKSGAEAALILGAFKKYTANFKSYKELYYSDRRQC FT ELINSFNCVELRIERSISNKQRKKKDGIERRRNDKRRTPTGSYDGGEETKTKVSQEEST FT GTRSQKSQREGAFKSQTIPLPTILSGRWFGTDRDVPPCEHGGIVQV" FT CDS 2411..2746 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q9WA72" FT /protein_id="AAD35093.1" FT /translation="MELNEGAMTNVELQLARMMEVKRQRRRSHKKNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYHHASMVELSKSEAPCFTLPAEEDHDFDDTDWFAGN FT EWAEGAF" XX SQ Sequence 3044 BP; 778 A; 671 C; 704 G; 891 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc caaactttta 60 agtttccatt tttctatggc ttttcccgcc cctactttct cactggccaa tcttttgaat 120 ggcagttacg gtgtcgacac tcccgaggaa gtagaacgcg tgcgatctga gcaacgcgaa 180 gaggctgctg cggcctgtcg taattacagg cccttacccg ctgtggatgt cagcgagagt 240 gtcacagagg atgcgcattc cctccgaact ccagacggag ctccctctga agaggtgtct 300 gttgagtttg tctcttatgg tgctgaagat taccttgaaa aatctgatga tgagctcctt 360 atcgcttttg agacgatggt caaacccatg cgtatcggtc aactatggtg ccccgagttc 420 gataaatgtt tatttatctc cagcgttgct atggccagag ctttgctgct agcacctaga 480 acatcccccc gaaccatgaa gtgttttgaa gacctggtcg cggctattta cactaaatcc 540 gatttctatt acgatgatga gtgtgaaacc gacgacgttc agatagatat ctcgtctcgc 600 gatgtacccg gttattcttt cgaaccgtgg tcccgatcgt ctggatttga accaccgcct 660 atctgtgagg cgtgtgacat gatcatgtac cagtgcccat gttatgattt taacgcttta 720 aagaaatcat gcactgagag gacttttgct gacgattatg ttattgaagg tttagatggt 780 gttgttgaca atgcaacttt gttgtcgaat ttaggcccgt ttttggtgcc tgtgaaatgt 840 caatatgaga aatgtccaac acctaccgtc gcgattcctc cggatttaaa tcgtgctact 900 gatcgtgttg atattaattt ggttcaatcc atttgtgact cgactctgcc cactcacaat 960 agctacgacg actcttttca tcaggtgttt gtcgaaagcg cggattattc tattgatctg 1020 gatcatgtta gacttcgaca gtctgatctt attgcgaaaa ttccagattc agggcatatg 1080 ataccggttt tgaataccgg gagcggtcac aagagagtag gtactacgaa ggaggtcctt 1140 acagcaatca agaaacgtaa tgctgacgtt ccagagctag gtgattccgt taatctgtct 1200 aggttgagta agcctgtggc tgagaggttt ttcatttcat atattaatgg caactctcta 1260 gcatccagca actttgttaa tgtcgttagt aacttccacg attacatgga gaaatggaag 1320 tcctcaggtc tttcgtatga cgatcttcca gatcttcatg ctgaaaatct gcaattttat 1380 gatcacatga taaaatctga tgtgaaacct gtagtgagcg acacactcaa cattgacaga 1440 ccggttccag ctactataac gtatcacaag aaaggtataa cctcccagtt ctcaccgtta 1500 ttcacagcgc tagtcgagcg cttccagaga tgccttcgag gacgtatcat tcttcctgtt 1560 ggaaagattt catcccttga gatggcggga ttcgatgtta agaataaaca ttgtctcgag 1620 attgatctgt ctaaatttga caagtctcag ggtgagttcc atttgatgat tcaggaacat 1680 attttgaatg gtctaggatg tccagctccg ataactaagt ggtggtgtga tttccatcga 1740 ttctcttaca ttagagaccg tagagctggt gttggtatgc ctatcagttt ccagagacga 1800 actggtgatg cattcactta ttttggtaac accatagtca cgatggctga atttgcatgg 1860 tgttacgaca ccgaccaatt cgaaaagctt ttattctcag gcgatgactc tctaggattt 1920 tcaatacttc cccctgttgg cgatccgagt aaattcacaa ctctcttcaa catggaagct 1980 aaggtgatgg aacctgcagt accatacatt tgttcgaagt tcttactctc tgacgagttc 2040 ggtaatactt tttccgttcc agatccattg cgtgagattc agcggttagg aacaaagaag 2100 atcccctatt ctgacaatga tgaattcctg tttgctcact tcatgagctt tgttgaccga 2160 ttgaagtttt tggaccgaat gtctcagtct tgcatcgatc aactctcact ctttttcgag 2220 ttgaagtaca ggaagtcggg ggctgaggct gctttaatac taggcgcctt taagaaatat 2280 accgctaatt tcaaatccta taaagaactc tactactcag atcgtcgtca gtgcgaattg 2340 atcaattcgt ttaattgcgt agagttaagg attgagcgtt cgatttccaa taagcaacga 2400 aagaagaaag atggaattga acgaaggcgc aatgacaaac gtcgaactcc aactggctcg 2460 tatgatggag gtgaagagac aaagacgaag gtctcacaag aagaatcgac gggaacgagg 2520 tcacaaaagt cccagcgaga gggcgcgttc aaatctcaga ctattccgct tcctaccatt 2580 ttatcaggta gatggttcgg aactgataga gatgtaccac catgcgagca tggtggaatt 2640 gtccaagtct gaggcccctt gttttacgtt accagcggaa gaagaccatg atttcgacga 2700 cacggattgg ttcgctggta atgaatgggc ggaaggtgcg ttttgaatct ccccttcctt 2760 ttctccctcc agtttctgag gcggagctga gttggcagta ttgctataaa ctgtctgaag 2820 tcactaaacg ctttgcggtg aacgggttgt ccatccagct aacggctaaa atggtcagtc 2880 gtggagaaat ccacgccagt agacttacaa gtctctgagg tgcctttgaa accatctcct 2940 aggtttcttc ggaaggactt cggtccgtgt acttccagca caagatgctg gtattagggt 3000 acaggcatcc ccccactttg gtgggggtct ctttaaggag acca 3044 //