ID   AF103993; SV 1; linear; genomic RNA; STD; VRL; 2212 BP.
XX
AC   AF103993;
XX
DT   12-MAR-1999 (Rel. 59, Created)
DT   28-SEP-1999 (Rel. 61, Last updated, Version 2)
XX
DE   Cucumber mosaic virus RNA3 strain MY17 3a protein and coat protein genes,
DE   complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2212
RA   Saitoh H., Fujiwara M., Kobori T., Ohki S.T., Osaki T.;
RT   "Nucleotide Sequence Analysis for RNA 3 of pepo-, SO- and MY17-Strains of
RT   Cucumber Mosaic Virus and its Comparison with Y-Strain";
RL   Bull. Osaka Prefect. Univ., Ser. B Agric. Life Sci. 51:33-37(1997).
XX
RN   [2]
RP   1-2212
RA   Saitoh H., Fijiwara M., Kobori T., Ohki S.T., Osaki T.;
RT   "Comparison of RNA 3 Sequence among Y-, pepo-, SO- and MY17-Strains of
RT   Cucumber Mosaic Virus";
RL   Nippon Shokubutsu Byori Gakkaiho 65:0(1998).
XX
RN   [3]
RP   1-2212
RA   Saitoh H., Fijiwara M., Kobori T., Ohki S.T., Osaki T.;
RT   ;
RL   Submitted (04-NOV-1998) to the INSDC.
RL   College of Agriculture, Osaka Prefecture University, Gakuen-cho, Sakai
RL   599-8531, Japan
XX
DR   MD5; 7a2f9ddb9318598238447142a61ad262.
DR   EuropePMC; PMC110906; 11044076.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2212
FT                   /organism="Cucumber mosaic virus"
FT                   /chromosome="RNA3"
FT                   /strain="MY17"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             119..958
FT                   /codon_start=1
FT                   /product="3a protein"
FT                   /note="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q787R2"
FT                   /protein_id="AAD17928.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1256..1912
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q76U37"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q76U37"
FT                   /protein_id="AAD17929.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2212 BP; 523 A; 518 C; 520 G; 651 T; 0 other;
     gtaatcctac cactgtgtgt gtgcgtgtgt gtgtatagag tcgtgtctgt acatttgagt        60
     cgtgctgtcc gcacatattt tattttattt ttttacagtg tgttagattt cccgaggcat       120
     ggctttccaa ggtaccagta ggactttaac tcaacagtcc tcagcggcta cgtctgacga       180
     tcttcaaaag atattattta gccctgaagc cattaagaaa atggctactg agtgtgacct       240
     aggccggcat cattggatgc gcgctgataa cgctatttca gtccggcccc tcgttcccga       300
     agtaacccat ggtcgtattg cttctttctt taagtctgga tatgatgtcg gtgaattatg       360
     ctcaaaagga tacatgagcg tccctcaagt attatgtgct gttactcgaa cagtttccac       420
     tgatgctgaa gggtccctga gaatttactt ggctgatcta ggcgacaagg agttatctcc       480
     tatagacggg caatgcgtct cattacataa ccatgatctt cccgctttag tgtctttcca       540
     accgacgtat gattgtccta tggaaacagt tgggaatcgt aagcggtgtt ttgctgttgt       600
     tatcgaaaga catggttaca ttgggtatac cggtaccaca gctagcgtgt gtagtaattg       660
     gcaagcaagg ttttcttcta agaataacaa ctacactcat atcgcagctg ggaagactct       720
     agtgctgcct ttcaacagat tagctgagca aacaaaaccg tcagctgtcg ctcgcctgtt       780
     gaagtcgcaa ttgaacaaca ttgaatcttc gcaatatttg ttaacgaatg cgaagattaa       840
     tcagaatgcg cgcagtgagt ccgaggaatt aaatgttgag agccctcccg ccgcaatcgg       900
     gagttcttcc gcgtcccgct ccgaagcctt cagaccgcag gtggttaacg gtctttagca       960
     ctttggtgcg tattagtata taagtatttg tgagtctgaa cataatacta tatctatagt      1020
     gtcctgtgtg agttgataca gtagacatct gtgacgcgat gccgtgttga gaagggaaca      1080
     catctggttt tagtaagcct acatcatagt tttgaggttc aattcctctt actccctgtt      1140
     gagcccctta ctttctcatg gatgcttctc cgcgagattg cgttattgtc tactgactat      1200
     atagagagtg tgtgtgctgt gttttctctt ttgtgtcgta gaattgagtc gagtcatgga      1260
     caaatctgaa tcaaccagtg ctggtcgtaa ccgtcgacgt cgtccgcgtc gtggttcccg      1320
     ctccgccccc tcctctgcgg atgctaactt tagagtcttg tcgcagcagc tttcgcgact      1380
     taataagacg ttagcagctg gtcgtccaac tattaaccac ccaacctttg tagggagtga      1440
     acgatgtaga cctgggtaca cgttcacatc tattacccta aagccaccaa aaatagaccg      1500
     tgggtcttat tacggtaaaa ggttgttact acctgattca gtcacggaat atgataagaa      1560
     gcttgtttcg cgcattcaaa ttcgagttaa tcctttgccg aaatttgatt ctaccgtgtg      1620
     ggtgacagtc cgtaaagttc ctgcctcctc ggacttatcc gttgccgcca tctctgctat      1680
     gtttgcggac ggagcctcac cggtcctggt ttatcagtat gccgcatctg gagtccaagc      1740
     taacaacaaa ttgttgtatg atctttcggc gatgcgcgct gatataggtg acatgagaaa      1800
     gtacgccgtc ctcgtttatt caaaagacga tgcgctcgag acggatgagc tagtacttca      1860
     tgttgacatc gagcaccaac gcattcccac atccggagtg ctcccagtct gattccgtgt      1920
     tcccagaatc ctccctccga atttctgtgg cgggagctga gttggcagtt ctgctataaa      1980
     ctgtctgaag ccactaaacg ttttacggtg aacgggttgt ccatccagct tacggctaaa      2040
     atggtcagtc gtggagaaat ctacgccagc aaacttacaa gtttctgagg cacctttgaa      2100
     accatctcct aggtttcttc ggaaggactt cggtccgtgt acttctagca caacgtgcta      2160
     gtttcagggt acggtgcccc ccactttcgt gggggcctcc aacaggagac ca              2212
//