ID AF063497; SV 1; linear; genomic DNA; STD; VRL; 4718 BP. XX AC AF063497; XX DT 27-APR-1999 (Rel. 59, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Adeno-associated virus 1, complete genome. XX KW . XX OS Adeno-associated virus - 1 OC Viruses; Parvoviridae; Parvovirinae; Dependoparvovirus. XX RN [1] RP 1-4718 RX PUBMED; 10196295. RA Xiao W., Chirmule N., Berta S.C., McCullough B., Gao G., Wilson J.M.; RT "Gene therapy vectors based on adeno-associated virus type 1"; RL J. Virol. 73(5):3994-4003(1999). XX RN [2] RP 1-4718 RA Xiao W., Wilson J.M.; RT ; RL Submitted (05-MAY-1998) to the INSDC. RL IHGT, University of Pennsylvania, 3601 Spruce Street, Philadelphia, PA RL 19104, USA XX DR MD5; c4f943e1c0a3cc3a3b9f2396a8b75c05. DR EuropePMC; PMC104178; 10196295. DR EuropePMC; PMC115897; 11222696. DR EuropePMC; PMC2293646; 18035387. DR EuropePMC; PMC2663820; 19381259. DR EuropePMC; PMC3209379; 21917944. DR EuropePMC; PMC4205840; 25335510. DR EuropePMC; PMC4265361; 25442288. DR EuropePMC; PMC5217859; 28060929. DR EuropePMC; PMC5571273; 28659484. DR EuropePMC; PMC5586161; 28125901. XX FH Key Location/Qualifiers FH FT source 1..4718 FT /organism="Adeno-associated virus - 1" FT /mol_type="genomic DNA" FT /note="AAV1" FT /db_xref="taxon:85106" FT CDS 335..2206 FT /codon_start=1 FT /product="nonstructural protein" FT /db_xref="GOA:Q9WBP7" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR014835" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9WBP7" FT /protein_id="AAD27758.1" FT /translation="MPGFYEIVIKVPSDLDEHLPGISDSFVSWVAEKEWELPPDSDMDL FT NLIEQAPLTVAEKLQRDFLVQWRRVSKAPEALFFVQFEKGESYFHLHILVETTGVKSMV FT LGRFLSQIRDKLVQTIYRGIEPTLPNWFAVTKTRNGAGGGNKVVDECYIPNYLLPKTQP FT ELQWAWTNMEEYISACLNLAERKRLVAQHLTHVSQTQEQNKENLNPNSDAPVIRSKTSA FT RYMELVGWLVDRGITSEKQWIQEDQASYISFNAASNSRSQIKAALDNAGKIMALTKSAP FT DYLVGPAPPADIKTNRIYRILELNGYEPAYAGSVFLGWAQKRFGKRNTIWLFGPATTGK FT TNIAEAIAHAVPFYGCVNWTNENFPFNDCVDKMVIWWEEGKMTAKVVESAKAILGGSKV FT RVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQDRMFKFELTRRLEHDF FT GKVTKQEVKEFFRWAQDHVTEVAHEFYVRKGGANKRPAPDDADKSEPKRACPSVADPST FT SDAEGAPVDFADRYQNKCSRHAGMLQMLFPCKTCERMNQNFNICFTHGTRDCSECFPGV FT SESQPVVRKRTYRKLCAIHHLLGRAPEIACSACDLVNVDLDDCVSEQ" FT CDS 2223..4433 FT /codon_start=1 FT /product="capsid protein" FT /db_xref="GOA:Q9WBP8" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="PDB:3NG9" FT /db_xref="PDB:5EGC" FT /db_xref="UniProtKB/TrEMBL:Q9WBP8" FT /protein_id="AAD27757.1" FT /translation="MAADGYLPDWLEDNLSEGIREWWDLKPGAPKPKANQQKQDDGRGL FT VLPGYKYLGPFNGLDKGEPVNAADAAALEHDKAYDQQLKAGDNPYLRYNHADAEFQERL FT QEDTSFGGNLGRAVFQAKKRVLEPLGLVEEGAKTAPGKKRPVEQSPQEPDSSSGIGKTG FT QQPAKKRLNFGQTGDSESVPDPQPLGEPPATPAAVGPTTMASGGGAPMADNNEGADGVG FT NASGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISSASTGASNDNHYFGYSTPWG FT YFDFNRFHCHFSPRDWQRLINNNWGFRPKRLNFKLFNIQVKEVTTNDGVTTIANNLTST FT VQVFSDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAVGRSSFYCLEYF FT PSQMLRTGNNFTFSYTFEEVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQNQSGSAQN FT KDLLFSRGSPAGMSVQPKNWLPGPCYRQQRVSKTKTDNNNSNFTWTGASKYNLNGRESI FT INPGTAMASHKDDEDKFFPMSGVMIFGKESAGASNTALDNVMITDEEEIKATNPVATER FT FGTVAVNFQSSSTDPATGDVHAMGALPGMVWQDRDVYLQGPIWAKIPHTDGHFHPSPLM FT GGFGLKNPPPQILIKNTPVPANPPAEFSATKFASFITQYSTGQVSVEIEWELQKENSKR FT WNPEVQYTSNYAKSANVDFTVDNNGLYTEPRPIGTRYLTRPL" XX SQ Sequence 4718 BP; 1121 A; 1393 C; 1273 G; 931 T; 0 other; ttgcccactc cctctctgcg cgctcgctcg ctcggtgggg cctgcggacc aaaggtccgc 60 agacggcaga gctctgctct gccggcccca ccgagcgagc gagcgcgcag agagggagtg 120 ggcaactcca tcactagggg taatcgcgaa gcgcctccca cgctgccgcg tcagcgctga 180 cgtaaattac gtcatagggg agtggtcctg tattagctgt cacgtgagtg cttttgcgac 240 attttgcgac accacgtggc catttagggt atatatggcc gagtgagcga gcaggatctc 300 cattttgacc gcgaaatttg aacgagcagc agccatgccg ggcttctacg agatcgtgat 360 caaggtgccg agcgacctgg acgagcacct gccgggcatt tctgactcgt ttgtgagctg 420 ggtggccgag aaggaatggg agctgccccc ggattctgac atggatctga atctgattga 480 gcaggcaccc ctgaccgtgg ccgagaagct gcagcgcgac ttcctggtcc aatggcgccg 540 cgtgagtaag gccccggagg ccctcttctt tgttcagttc gagaagggcg agtcctactt 600 ccacctccat attctggtgg agaccacggg ggtcaaatcc atggtgctgg gccgcttcct 660 gagtcagatt agggacaagc tggtgcagac catctaccgc gggatcgagc cgaccctgcc 720 caactggttc gcggtgacca agacgcgtaa tggcgccgga ggggggaaca aggtggtgga 780 cgagtgctac atccccaact acctcctgcc caagactcag cccgagctgc agtgggcgtg 840 gactaacatg gaggagtata taagcgcctg tttgaacctg gccgagcgca aacggctcgt 900 ggcgcagcac ctgacccacg tcagccagac ccaggagcag aacaaggaga atctgaaccc 960 caattctgac gcgcctgtca tccggtcaaa aacctccgcg cgctacatgg agctggtcgg 1020 gtggctggtg gaccggggca tcacctccga gaagcagtgg atccaggagg accaggcctc 1080 gtacatctcc ttcaacgccg cttccaactc gcggtcccag atcaaggccg ctctggacaa 1140 tgccggcaag atcatggcgc tgaccaaatc cgcgcccgac tacctggtag gccccgctcc 1200 gcccgcggac attaaaacca accgcatcta ccgcatcctg gagctgaacg gctacgaacc 1260 tgcctacgcc ggctccgtct ttctcggctg ggcccagaaa aggttcggga agcgcaacac 1320 catctggctg tttgggccgg ccaccacggg caagaccaac atcgcggaag ccatcgccca 1380 cgccgtgccc ttctacggct gcgtcaactg gaccaatgag aactttccct tcaatgattg 1440 cgtcgacaag atggtgatct ggtgggagga gggcaagatg acggccaagg tcgtggagtc 1500 cgccaaggcc attctcggcg gcagcaaggt gcgcgtggac caaaagtgca agtcgtccgc 1560 ccagatcgac cccacccccg tgatcgtcac ctccaacacc aacatgtgcg ccgtgattga 1620 cgggaacagc accaccttcg agcaccagca gccgttgcag gaccggatgt tcaaatttga 1680 actcacccgc cgtctggagc atgactttgg caaggtgaca aagcaggaag tcaaagagtt 1740 cttccgctgg gcgcaggatc acgtgaccga ggtggcgcat gagttctacg tcagaaaggg 1800 tggagccaac aaaagacccg cccccgatga cgcggataaa agcgagccca agcgggcctg 1860 cccctcagtc gcggatccat cgacgtcaga cgcggaagga gctccggtgg actttgccga 1920 caggtaccaa aacaaatgtt ctcgtcacgc gggcatgctt cagatgctgt ttccctgcaa 1980 gacatgcgag agaatgaatc agaatttcaa catttgcttc acgcacggga cgagagactg 2040 ttcagagtgc ttccccggcg tgtcagaatc tcaaccggtc gtcagaaaga ggacgtatcg 2100 gaaactctgt gccattcatc atctgctggg gcgggctccc gagattgctt gctcggcctg 2160 cgatctggtc aacgtggacc tggatgactg tgtttctgag caataaatga cttaaaccag 2220 gtatggctgc cgatggttat cttccagatt ggctcgagga caacctctct gagggcattc 2280 gcgagtggtg ggacttgaaa cctggagccc cgaagcccaa agccaaccag caaaagcagg 2340 acgacggccg gggtctggtg cttcctggct acaagtacct cggacccttc aacggactcg 2400 acaaggggga gcccgtcaac gcggcggacg cagcggccct cgagcacgac aaggcctacg 2460 accagcagct caaagcgggt gacaatccgt acctgcggta taaccacgcc gacgccgagt 2520 ttcaggagcg tctgcaagaa gatacgtctt ttgggggcaa cctcgggcga gcagtcttcc 2580 aggccaagaa gcgggttctc gaacctctcg gtctggttga ggaaggcgct aagacggctc 2640 ctggaaagaa acgtccggta gagcagtcgc cacaagagcc agactcctcc tcgggcatcg 2700 gcaagacagg ccagcagccc gctaaaaaga gactcaattt tggtcagact ggcgactcag 2760 agtcagtccc cgatccacaa cctctcggag aacctccagc aacccccgct gctgtgggac 2820 ctactacaat ggcttcaggc ggtggcgcac caatggcaga caataacgaa ggcgccgacg 2880 gagtgggtaa tgcctcagga aattggcatt gcgattccac atggctgggc gacagagtca 2940 tcaccaccag cacccgcacc tgggccttgc ccacctacaa taaccacctc tacaagcaaa 3000 tctccagtgc ttcaacgggg gccagcaacg acaaccacta cttcggctac agcaccccct 3060 gggggtattt tgatttcaac agattccact gccacttttc accacgtgac tggcagcgac 3120 tcatcaacaa caattgggga ttccggccca agagactcaa cttcaaactc ttcaacatcc 3180 aagtcaagga ggtcacgacg aatgatggcg tcacaaccat cgctaataac cttaccagca 3240 cggttcaagt cttctcggac tcggagtacc agcttccgta cgtcctcggc tctgcgcacc 3300 agggctgcct ccctccgttc ccggcggacg tgttcatgat tccgcaatac ggctacctga 3360 cgctcaacaa tggcagccaa gccgtgggac gttcatcctt ttactgcctg gaatatttcc 3420 cttctcagat gctgagaacg ggcaacaact ttaccttcag ctacaccttt gaggaagtgc 3480 ctttccacag cagctacgcg cacagccaga gcctggaccg gctgatgaat cctctcatcg 3540 accaatacct gtattacctg aacagaactc aaaatcagtc cggaagtgcc caaaacaagg 3600 acttgctgtt tagccgtggg tctccagctg gcatgtctgt tcagcccaaa aactggctac 3660 ctggaccctg ttatcggcag cagcgcgttt ctaaaacaaa aacagacaac aacaacagca 3720 attttacctg gactggtgct tcaaaatata acctcaatgg gcgtgaatcc atcatcaacc 3780 ctggcactgc tatggcctca cacaaagacg acgaagacaa gttctttccc atgagcggtg 3840 tcatgatttt tggaaaagag agcgccggag cttcaaacac tgcattggac aatgtcatga 3900 ttacagacga agaggaaatt aaagccacta accctgtggc caccgaaaga tttgggaccg 3960 tggcagtcaa tttccagagc agcagcacag accctgcgac cggagatgtg catgctatgg 4020 gagcattacc tggcatggtg tggcaagata gagacgtgta cctgcagggt cccatttggg 4080 ccaaaattcc tcacacagat ggacactttc acccgtctcc tcttatgggc ggctttggac 4140 tcaagaaccc gcctcctcag atcctcatca aaaacacgcc tgttcctgcg aatcctccgg 4200 cggagttttc agctacaaag tttgcttcat tcatcaccca atactccaca ggacaagtga 4260 gtgtggaaat tgaatgggag ctgcagaaag aaaacagcaa gcgctggaat cccgaagtgc 4320 agtacacatc caattatgca aaatctgcca acgttgattt tactgtggac aacaatggac 4380 tttatactga gcctcgcccc attggcaccc gttaccttac ccgtcccctg taattacgtg 4440 ttaatcaata aaccggttga ttcgtttcag ttgaactttg gtctcctgtc cttcttatct 4500 tatcggttac catggttata gcttacacat taactgcttg gttgcgcttc gcgataaaag 4560 acttacgtca tcgggttacc cctagtgatg gagttgccca ctccctctct gcgcgctcgc 4620 tcgctcggtg gggcctgcgg accaaaggtc cgcagacggc agagctctgc tctgccggcc 4680 ccaccgagcg agcgagcgcg cagagaggga gtgggcaa 4718 //