ID AF043926; SV 1; linear; genomic RNA; STD; VRL; 3205 BP. XX AC AF043926; XX DT 01-JUN-1999 (Rel. 59, Created) DT 30-APR-2000 (Rel. 63, Last updated, Version 4) XX DE African horse sickness virus serotype 9 major outer capsid protein VP2 DE gene, complete cds. XX KW . XX OS African horse sickness virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-3205 RX DOI; 10.1016/S0166-0934(99)00176-7. RX PUBMED; 10713375. RA Venter M., Napier G., Huismans H.; RT "Cloning, sequencing and expression of the gene that encodes the major RT neutralisation-specific antigen of African horsesickness virus serotype 9"; RL J. Virol. Methods 86(1):41-53(2000). XX RN [2] RP 1-3205 RA Venter M.; RT ; RL Submitted (21-JAN-1998) to the INSDC. RL Genetics, University of Pretoria, Lynnwood Road, Pretoria, Gauteng 0002, RL South Africa XX DR MD5; 1aaf9099c9422a493ad8c4cb962f2a94. XX FH Key Location/Qualifiers FH FT source 1..3205 FT /organism="African horse sickness virus" FT /chromosome="L2" FT /serotype="9" FT /mol_type="genomic RNA" FT /db_xref="taxon:40050" FT CDS 13..3174 FT /codon_start=1 FT /product="major outer capsid protein VP2" FT /note="serotype specific antigen; VP2 contains serotype FT specific epitopes and neutralisation epitopes" FT /db_xref="GOA:Q9WSQ2" FT /db_xref="InterPro:IPR001742" FT /db_xref="UniProtKB/TrEMBL:Q9WSQ2" FT /protein_id="AAD33082.1" FT /translation="MAFEFGILQTDKIRENTLEKTNCDVILTRENRVRTREVDGVKGYY FT WEDTDHRLGLCEVEHTVSVRDFMYKQTKCEGSYPVVPLYMIDAIKYGRMIDRNDLQIRV FT DKDDKTLFKIQVQPYLGDAYFSPEHYTATFFKREPLPIHVDTIRDYIGKRINYFERELG FT SGVRDANLEMIVGKWKDNTYKRIEGEKTTMCVRHEPDSVLQILKKMRFGMLYPNYYMLN FT TGYIVTESSKGAPLNRWLVKERTVGKVKAAEAFAGNSLLKNLASRMEDEELSREIIVAV FT INYGSKFGTRSGKKKDLMTIDKLEKYCESLTTFVHKKKRDEGDDETARAIIRNQWIKGM FT PSMNLKKEMKVSRGPIQNWSFFMSLEVFKRNNKVDIDPNHDTWKNHVKEIRERMQKEQS FT ANSNLPLKDPKLMASAYLQVNSTRTVEHWIDWVVDLIMLAQVKRLIKEYKFIRLETTSL FT MAGMNKLVGALRCYAYCLILALYDFYGADIEGFEKGSNSSAIVETVVQMFPNFKQEIQA FT NFGINLNIKDKKQVLFVRMDMGSEFSEDEQKGYMFEYGWAKREERIWTNYGDILTDLVE FT QLYKSILDHEEWEKIVDDPERYFYDELFNASPETVFISKGYDLDNNIVIEGKVGQDVTY FT FSKRFVSYWYRVRQVQTSKGIERRSIEDVKYREFDIESFKPYAIGEIGIHASTYKYQDL FT LAGRNRGEKVKDSQALVWYDLALTNYTLVRPQDRCWIMSCTDSEYTLRFAMITMIFERL FT SEETDLSYHDILLRVREYPIQSFASYKHFYVRVLQHVFRDYQEIDVLEFCTRMLDPRTR FT ESGLNKFSRFKQWRESEFLIDALKMNFLLWVVFELENIDVDYSKKRHPLLISTDKGLRV FT VPVDLFNSMLSVSSSGWIPYVERVCERSEIKRRLNADELKLKNWFIAYYITLPLLRRAE FT PRMSFKYEGITTWIGSNCGGVRDYLIQMLPARKPKPGVLILAYGAETNVAWLNHALRDI FT LSLEGSLGMIIISDGSVVNKSKLRVRDMKIYNRGEVDRLILISSGDYTFGNKYLLSKLM FT AKIEQ" XX SQ Sequence 3205 BP; 1020 A; 465 C; 809 G; 911 T; 0 other; gtttaattca ccatggcgtt cgagtttgga atacttcaga cagataaaat tagagagaat 60 acacttgaaa agacaaactg tgacgtgatt cttacgagag agaatagagt gcgaacgagg 120 gaagttgatg gagtgaaagg atattactgg gaagataccg atcacaggtt gggcttatgt 180 gaagtcgaac atactgtgtc ggtgagggat tttatgtaca aacaaacgaa atgtgaaggg 240 tcatatccgg tcgtgccttt atatatgatt gatgcaatta aatatggacg aatgatcgat 300 aggaatgacc tccaaattag agtagacaaa gatgataaaa ctctatttaa gatacaagtg 360 cagccgtact taggtgatgc ctatttttca ccagagcatt acaccgcgac cttctttaaa 420 agagaaccgc tgcctattca tgtagatacg attcgagatt acattggaaa acggattaat 480 tatttcgagc gagagttagg tagtggagta cgagatgcga acttagaaat gatcgttggg 540 aagtggaagg ataataccta taaaagaatt gaaggtgaaa aaacgacgat gtgcgtgagg 600 catgaaccag attcggtact acagatatta aaaaagatga ggtttggaat gttatatcca 660 aattattata tgttgaatac aggttatata gttactgaat caagtaaggg ggcaccgttg 720 aatcgatggt tggtgaaaga gagaacagtt ggaaaagtca aggcggccga ggcctttgcg 780 ggcaattcgt tattaaaaaa cttggcaagc cggatggaag acgaagaatt gagtcgggaa 840 ataatagttg cggtgatcaa ttatggttcg aagttcggga ctaggtccgg gaagaaaaaa 900 gatttgatga ccattgataa gcttgaaaaa tactgtgaat ccttaacgac gtttgttcac 960 aaaaagaagc gtgatgaagg tgatgatgaa acagctaggg ctatcattag gaatcaatgg 1020 attaagggaa tgccaagcat gaatttgaaa aaagaaatga aagtttcgcg tggtcctatt 1080 caaaattggt cgttttttat gtcccttgag gtgtttaaac gtaataataa agttgatatt 1140 gatccaaatc atgatacatg gaaaaaccat gtcaaagaaa tcagagagag gatgcagaaa 1200 gaacagagcg cgaattccaa cttacccctt aaagatccca agttgatggc gtcagcttat 1260 ctacaagtga attctacgcg cacggtcgaa cattggatag attgggttgt tgatttaatt 1320 atgttagcac aggttaaacg attaattaag gagtacaagt ttataagatt agagactacg 1380 agcttaatgg caggaatgaa taaactagtc ggagctttac gttgctatgc ctattgcttg 1440 attctggctc tctatgattt ctatggtgcg gatatcgaag gttttgaaaa gggttcaaac 1500 tcttccgcga tagtagagac ggttgtacag atgttcccga acttcaagca ggagattcaa 1560 gctaatttcg gtataaattt aaatatcaaa gataagaagc aagtgttgtt cgtcaggatg 1620 gatatgggtt ctgagtttag tgaggatgag cagaaaggat atatgtttga gtacggatgg 1680 gcgaaaaggg aagagcgaat atggacgaat tacggtgaca tattaactga tttggtcgaa 1740 cagctttata agagcatttt ggatcatgag gaatgggaga aaatcgttga tgatcctgag 1800 aggtatttct atgatgagct ttttaacgca tcaccagaga cagtttttat tagcaaaggt 1860 tatgaccttg acaataatat cgtaattgag ggaaaggtag gtcaagatgt cacctatttt 1920 tcgaaacggt ttgtatcata ttggtatcga gttcgacagg ttcaaacctc aaagggtatt 1980 gagaggaggt cgattgagga tgtcaaatat agggagtttg atatagaaag ttttaagcct 2040 tacgctattg gcgagatcgg tattcacgcg tcaacttaca agtatcagga tttattagcg 2100 gggcgtaatc gcggagaaaa agtgaaggac tcgcaagcgc tcgtgtggta tgatcttgct 2160 ttgactaatt acacactagt gcggccacaa gatagatgtt ggataatgtc gtgtactgat 2220 tctgaataca ctttgagatt cgcgatgatc actatgatat tcgagcgctt atctgaggag 2280 actgatcttt cttaccatga tattttattg agggttcgcg aatatccgat acaatcattc 2340 gcttcataca aacatttcta tgttcgcgta ttacagcacg tttttagaga ctaccaagag 2400 atcgatgtat tagagttctg tactaggatg ctcgatccga ggacacgtga gtcggggcta 2460 aacaagtttt cgagattcaa acaatggaga gaatcggaat tcttgataga tgctcttaag 2520 atgaattttc tcctgtgggt agtttttgaa ctggagaata tagacgttga ttatagcaag 2580 aagaggcacc ctttgctgat atctactgac aaaggattaa gagtagttcc agttgatctt 2640 ttcaattcta tgcttagtgt ttcttcgagc gggtggattc catatgttga aagagtgtgt 2700 gagcgttcgg agattaaaag gagattgaat gcagatgaat tgaaattaaa gaactggttc 2760 attgcgtatt atatcacttt gcccttgtta aggcgtgcgg aaccgaggat gagctttaag 2820 tatgaaggaa ttacaacttg gattggttca aactgtggtg gggtacgaga ttatctaatt 2880 caaatgctcc cagcgaggaa accgaagcca ggcgttttaa ttttagctta tggcgcggag 2940 actaacgtag cgtggttgaa ccatgcgcta cgtgatatac tttcgctaga ggggtcgtta 3000 gggatgatta ttatcagtga tggctcggtg gtgaataaaa gcaagctccg tgtgagagat 3060 atgaagatat ataatagggg agaagtagac agattaattt tgatttcaag tggggattac 3120 acatttggga acaaatatct cttatcgaaa ttaatggcta agattgaaca gtagcgtgac 3180 tgctactcca tgtgaataca cttac 3205 //