ID AF028705; SV 1; linear; genomic DNA; STD; VRL; 4722 BP. XX AC AF028705; XX DT 14-JAN-1998 (Rel. 54, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Adeno-associated virus 3B, complete genome. XX KW . XX OS Adeno-associated virus 3B OC Viruses; Parvoviridae; Parvovirinae; Dependoparvovirus. XX RN [1] RP 1-4722 RX PUBMED; 9420229. RA Rutledge E.A., Halbert C.L., Russell D.W.; RT "Infectious clones and vectors derived from adeno-associated virus (AAV) RT serotypes other than AAV type 2"; RL J. Virol. 72(1):309-319(1998). XX RN [2] RP 1-4722 RA Rutledge E.A., Russell D.W.; RT ; RL Submitted (25-SEP-1997) to the INSDC. RL Hematology, Univ of Washington, Box 357720, Seattle, WA 98195, USA XX DR MD5; a0c414fa052e3a1d445b6ac4930cf73e. DR EuropePMC; PMC109378; 9420229. DR EuropePMC; PMC115897; 11222696. DR EuropePMC; PMC3209379; 21917944. DR EuropePMC; PMC6279885; 30534580. XX FH Key Location/Qualifiers FH FT source 1..4722 FT /organism="Adeno-associated virus 3B" FT /mol_type="genomic DNA" FT /note="AAV3B" FT /db_xref="taxon:68742" FT CDS 317..2191 FT /codon_start=1 FT /product="nonstructural protein Rep78" FT /db_xref="GOA:O56138" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR014835" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:O56138" FT /protein_id="AAB95451.1" FT /translation="MPGFYEIVLKVPSDLDEHLPGISNSFVNWVAEKEWELPPDSDMDP FT NLIEQAPLTVAEKLQREFLVEWRRVSKAPEALFFVQFEKGETYFHLHVLIETIGVKSMV FT VGRYVSQIKEKLVTRIYRGVEPQLPNWFAVTKTRNGAGGGNKVVDDCYIPNYLLPKTQP FT ELQWAWTNMDQYLSACLNLAERKRLVAQHLTHVSQTQEQNKENQNPNSDAPVIRSKTSA FT RYMELVGWLVDRGITSEKQWIQEDQASYISFNAASNSRSQIKAALDNASKIMSLTKTAP FT DYLVGSNPPEDITKNRIYQILELNGYDPQYAASVFLGWAQKKFGKRNTIWLFGPATTGK FT TNIAEAIAHAVPFYGCVNWTNENFPFNDCVDKMVIWWEEGKMTAKVVESAKAILGGSKV FT RVDQKCKSSAQIEPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQDRMFKFELTRRLDHDF FT GKVTKQEVKDFFRWASDHVTDVAHEFYVRKGGAKKRPASNDADVSEPKRQCTSLAQPTT FT SDAEAPADYADRYQNKCSRHVGMNLMLFPCKTCERMNQISNVCFTHGQRDCGECFPGMS FT ESQPVSVVKKKTYQKLCPIHHILGRAPEIACSACDLANVDLDDCVSEQ" FT CDS 2208..4418 FT /codon_start=1 FT /product="capsid protein VP1" FT /db_xref="GOA:O56139" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR036952" FT /db_xref="PDB:3KIC" FT /db_xref="PDB:3KIE" FT /db_xref="UniProtKB/TrEMBL:O56139" FT /protein_id="AAB95452.1" FT /translation="MAADGYLPDWLEDNLSEGIREWWALKPGVPQPKANQQHQDNRRGL FT VLPGYKYLGPGNGLDKGEPVNEADAAALEHDKAYDQQLKAGDNPYLKYNHADAEFQERL FT QEDTSFGGNLGRAVFQAKKRILEPLGLVEEAAKTAPGKKRPVDQSPQEPDSSSGVGKSG FT KQPARKRLNFGQTGDSESVPDPQPLGEPPAAPTSLGSNTMASGGGAPMADNNEGADGVG FT NSSGNWHCDSQWLGDRVITTSTRTWALPTYNNHLYKQISSQSGASNDNHYFGYSTPWGY FT FDFNRFHCHFSPRDWQRLINNNWGFRPKKLSFKLFNIQVKEVTQNDGTTTIANNLTSTV FT QVFTDSEYQLPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNNGSQAVGRSSFYCLEYFP FT SQMLRTGNNFQFSYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQGTTSGTTNQ FT SRLLFSQAGPQSMSLQARNWLPGPCYRQQRLSKTANDNNNSNFPWTAASKYHLNGRDSL FT VNPGPAMASHKDDEEKFFPMHGNLIFGKEGTTASNAELDNVMITDEEEIRTTNPVATEQ FT YGTVANNLQSSNTAPTTRTVNDQGALPGMVWQDRDVYLQGPIWAKIPHTDGHFHPSPLM FT GGFGLKHPPPQIMIKNTPVPANPPTTFSPAKFASFITQYSTGQVSVEIEWELQKENSKR FT WNPEIQYTSNYNKSVNVDFTVDTNGVYSEPRPIGTRYLTRNL" XX SQ Sequence 4722 BP; 1204 A; 1297 C; 1243 G; 978 T; 0 other; tggccactcc ctctatgcgc actcgctcgc tcggtggggc ctggcgacca aaggtcgcca 60 gacggacgtg ctttgcacgt ccggccccac cgagcgagcg agtgcgcata gagggagtgg 120 ccaactccat cactagaggt atggcagtga cgtaacgcga agcgcgcgaa gcgagaccac 180 gcctaccagc tgcgtcagca gtcaggtgac ccttttgcga cagtttgcga caccacgtgg 240 ccgctgaggg tatatattct cgagtgagcg aaccaggagc tccattttga ccgcgaaatt 300 tgaacgagca gcagccatgc cggggttcta cgagattgtc ctgaaggtcc cgagtgacct 360 ggacgagcac ctgccgggca tttctaactc gtttgttaac tgggtggccg agaaggaatg 420 ggagctgccg ccggattctg acatggatcc gaatctgatt gagcaggcac ccctgaccgt 480 ggccgaaaag cttcagcgcg agttcctggt ggagtggcgc cgcgtgagta aggccccgga 540 ggccctcttt tttgtccagt tcgaaaaggg ggagacctac ttccacctgc acgtgctgat 600 tgagaccatc ggggtcaaat ccatggtggt cggccgctac gtgagccaga ttaaagagaa 660 gctggtgacc cgcatctacc gcggggtcga gccgcagctt ccgaactggt tcgcggtgac 720 caaaacgcga aatggcgccg ggggcgggaa caaggtggtg gacgactgct acatccccaa 780 ctacctgctc cccaagaccc agcccgagct ccagtgggcg tggactaaca tggaccagta 840 tttaagcgcc tgtttgaatc tcgcggagcg taaacggctg gtggcgcagc atctgacgca 900 cgtgtcgcag acgcaggagc agaacaaaga gaatcagaac cccaattctg acgcgccggt 960 catcaggtca aaaacctcag ccaggtacat ggagctggtc gggtggctgg tggaccgcgg 1020 gatcacgtca gaaaagcaat ggattcagga ggaccaggcc tcgtacatct ccttcaacgc 1080 cgcctccaac tcgcggtccc agatcaaggc cgcgctggac aatgcctcca agatcatgag 1140 cctgacaaag acggctccgg actacctggt gggcagcaac ccgccggagg acattaccaa 1200 aaatcggatc taccaaatcc tggagctgaa cgggtacgat ccgcagtacg cggcctccgt 1260 cttcctgggc tgggcgcaaa agaagttcgg gaagaggaac accatctggc tctttgggcc 1320 ggccacgacg ggtaaaacca acatcgcgga agccatcgcc cacgccgtgc ccttctacgg 1380 ctgcgtaaac tggaccaatg agaactttcc cttcaacgat tgcgtcgaca agatggtgat 1440 ctggtgggag gagggcaaga tgacggccaa ggtcgtggag agcgccaagg ccattctggg 1500 cggaagcaag gtgcgcgtgg accaaaagtg caagtcatcg gcccagatcg aacccactcc 1560 cgtgatcgtc acctccaaca ccaacatgtg cgccgtgatt gacgggaaca gcaccacctt 1620 cgagcatcag cagccgctgc aggaccggat gtttaaattt gaacttaccc gccgtttgga 1680 ccatgacttt gggaaggtca ccaaacagga agtaaaggac tttttccggt gggcttccga 1740 tcacgtgact gacgtggctc atgagttcta cgtcagaaag ggtggagcta agaaacgccc 1800 cgcctccaat gacgcggatg taagcgagcc aaaacggcag tgcacgtcac ttgcgcagcc 1860 gacaacgtca gacgcggaag caccggcgga ctacgcggac aggtaccaaa acaaatgttc 1920 tcgtcacgtg ggcatgaatc tgatgctttt tccctgtaaa acatgcgaga gaatgaatca 1980 aatttccaat gtctgtttta cgcatggtca aagagactgt ggggaatgct tccctggaat 2040 gtcagaatct caacccgttt ctgtcgtcaa aaagaagact tatcagaaac tgtgtccaat 2100 tcatcatatc ctgggaaggg cacccgagat tgcctgttcg gcctgcgatt tggccaatgt 2160 ggacttggat gactgtgttt ctgagcaata aatgacttaa accaggtatg gctgctgacg 2220 gttatcttcc agattggctc gaggacaacc tttctgaagg cattcgtgag tggtgggctc 2280 tgaaacctgg agtccctcaa cccaaagcga accaacaaca ccaggacaac cgtcggggtc 2340 ttgtgcttcc gggttacaaa tacctcggac ccggtaacgg actcgacaaa ggagagccgg 2400 tcaacgaggc ggacgcggca gccctcgaac acgacaaagc ttacgaccag cagctcaagg 2460 ccggtgacaa cccgtacctc aagtacaacc acgccgacgc cgagtttcag gagcgtcttc 2520 aagaagatac gtcttttggg ggcaaccttg gcagagcagt cttccaggcc aaaaagagga 2580 tccttgagcc tcttggtctg gttgaggaag cagctaaaac ggctcctgga aagaagaggc 2640 ctgtagatca gtctcctcag gaaccggact catcatctgg tgttggcaaa tcgggcaaac 2700 agcctgccag aaaaagacta aatttcggtc agactggcga ctcagagtca gtcccagacc 2760 ctcaacctct cggagaacca ccagcagccc ccacaagttt gggatctaat acaatggctt 2820 caggcggtgg cgcaccaatg gcagacaata acgagggtgc cgatggagtg ggtaattcct 2880 caggaaattg gcattgcgat tcccaatggc tgggcgacag agtcatcacc accagcacca 2940 gaacctgggc cctgcccact tacaacaacc atctctacaa gcaaatctcc agccaatcag 3000 gagcttcaaa cgacaaccac tactttggct acagcacccc ttgggggtat tttgacttta 3060 acagattcca ctgccacttc tcaccacgtg actggcagcg actcattaac aacaactggg 3120 gattccggcc caagaaactc agcttcaagc tcttcaacat ccaagttaaa gaggtcacgc 3180 agaacgatgg cacgacgact attgccaata accttaccag cacggttcaa gtgtttacgg 3240 actcggagta tcagctcccg tacgtgctcg ggtcggcgca ccaaggctgt ctcccgccgt 3300 ttccagcgga cgtcttcatg gtccctcagt atggatacct caccctgaac aacggaagtc 3360 aagcggtggg acgctcatcc ttttactgcc tggagtactt cccttcgcag atgctaagga 3420 ctggaaataa cttccaattc agctatacct tcgaggatgt accttttcac agcagctacg 3480 ctcacagcca gagtttggat cgcttgatga atcctcttat tgatcagtat ctgtactacc 3540 tgaacagaac gcaaggaaca acctctggaa caaccaacca atcacggctg ctttttagcc 3600 aggctgggcc tcagtctatg tctttgcagg ccagaaattg gctacctggg ccctgctacc 3660 ggcaacagag actttcaaag actgctaacg acaacaacaa cagtaacttt ccttggacag 3720 cggccagcaa atatcatctc aatggccgcg actcgctggt gaatccagga ccagctatgg 3780 ccagtcacaa ggacgatgaa gaaaaatttt tccctatgca cggcaatcta atatttggca 3840 aagaagggac aacggcaagt aacgcagaat tagataatgt aatgattacg gatgaagaag 3900 agattcgtac caccaatcct gtggcaacag agcagtatgg aactgtggca aataacttgc 3960 agagctcaaa tacagctccc acgactagaa ctgtcaatga tcagggggcc ttacctggca 4020 tggtgtggca agatcgtgac gtgtaccttc aaggacctat ctgggcaaag attcctcaca 4080 cggatggaca ctttcatcct tctcctctga tgggaggctt tggactgaaa catccgcctc 4140 ctcaaatcat gatcaaaaat actccggtac cggcaaatcc tccgacgact ttcagcccgg 4200 ccaagtttgc ttcatttatc actcagtact ccactggaca ggtcagcgtg gaaattgagt 4260 gggagctaca gaaagaaaac agcaaacgtt ggaatccaga gattcagtac acttccaact 4320 acaacaagtc tgttaatgtg gactttactg tagacactaa tggtgtttat agtgaacctc 4380 gccctattgg aacccggtat ctcacacgaa acttgtaatc ctggttaatc aataaaccgt 4440 ttaattcgtt tcagttgaac tttggctctt gtgcacttct tatcttatct tgtttccatg 4500 gctactgcgt agataagcag cggcctgcgg cgcttgcgct tcgcggttta caactgctgg 4560 ttaatattta actctcgcca tacctctagt gatggagttg gccactccct ctatgcgcac 4620 tcgctcgctc ggtggggccg gacgtgcaaa gcacgtccgt ctggcgacct ttggtcgcca 4680 ggccccaccg agcgagcgag tgcgcataga gggagtggcc aa 4722 //