ID AB796381; SV 1; linear; genomic RNA; STD; VRL; 1733 BP. XX AC AB796381; XX DT 15-MAR-2013 (Rel. 116, Created) DT 30-SEP-2013 (Rel. 118, Last updated, Version 2) XX DE Gentian Kobu-sho-associated virus gene for hypothetical polyprotein, DE putative RNA-dependent RNA polymerase domain, partial cds, isolate: NW28. XX KW . XX OS Gentian Kobu-sho-associated virus OC Viruses; Riboviria; dsRNA viruses. XX RN [1] RP 1-1733 RA Atsumi G., Sekine K.T.; RT ; RL Submitted (07-MAR-2013) to the INSDC. RL Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita, RL Kitakami, Iwate 024-0003, Japan URL :http://www.ibrc.or.jp XX RN [2] RX DOI; 10.1099/vir.0.053637-0. RX PUBMED; 23907397. RA Atsumi G., Tomita R., Kobayashi K., Sekine K.; RT "Prevalence and genetic diversity of an unusual virus associated with RT Kobu-sho disease of gentian in Japan"; RL J. Gen. Virol. 94(Pt 10):2360-2365(2013). XX DR MD5; 626ee16c01222af84056ea229de98e59. XX FH Key Location/Qualifiers FH FT source 1..1733 FT /organism="Gentian Kobu-sho-associated virus" FT /host="Gentiana sp." FT /isolate="NW28" FT /mol_type="genomic RNA" FT /country="Japan:Iwate, Waga, Kaisawa" FT /isolation_source="Kobu-sho-affected stem" FT /collection_date="2010" FT /db_xref="taxon:1150353" FT CDS <1..>1733 FT /codon_start=1 FT /transl_table=1 FT /product="hypothetical polyprotein" FT /note="putative RNA-dependent RNA polymerase domain" FT /db_xref="GOA:M4ZTA3" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:M4ZTA3" FT /protein_id="BAM99922.1" FT /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE FT TRRTRQDKLRQASNIAPRNIRFAEFVQRFADLMILGPVQKYHAHKEKLYYGSSTGTPLW FT RLGNLTKALHDVYAPRHQQEFWESSELGCDVCGYYNNSSCSCLIVDGKLCQVHGLKHGE FT TQSSKCKECRTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRKGLERKALKAM FT IASGDFSGFDGTVSKTDLVLNYIFYKNIYRSEYHLMLKTRWEHWMWALVINDHGHVIVS FT DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEATTPIGEVWFRSDFDYTTPKYK FT KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG FT ISYCSHNYNRCRIGKISTPVEMTEMSGVAEMVPIDCVPKTFKKVDNDNLPLQHLRDKKL FT GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK FT LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSITKTIGSALRGVFNIS FT TL" XX SQ Sequence 1733 BP; 563 A; 365 C; 435 G; 370 T; 0 other; gtatgtagag ataaggtgga gaccaaagcc aagaagaaca tcgataacgg tcgtctgctg 60 ataccagatt gtacggacga gatcgaccct agagggaaat cgtacaagta cttgccttac 120 acgaagaaag aagaaaccag gagaactagg caagacaagt taagacaggc gagcaacatc 180 gcgcccagga acatccgctt tgcagaattc gtgcagcgct ttgcggatct gatgattcta 240 ggacctgtgc agaaatatca tgcacataaa gagaaattgt attatggatc atcaacaggg 300 acgcctctct ggaggctagg aaatttgacg aaggcgttac acgatgtcta tgcacctaga 360 caccaacaag agttctggga atcttctgag cttgggtgcg atgtatgcgg ctattacaac 420 aactcatcat gttcttgttt gattgttgat gggaagttgt gccaagtaca tggccttaag 480 cacggggaga ctcagtcttc aaaatgtaaa gagtgtagaa cacacagagg cgactcggca 540 aacgagcaag agtggttcaa gaacatcatg aacaacaaaa cggaactgct cagtgaacaa 600 gcctatatcc gcatgtacga ccctagcttt aggaagggac tagagagaaa agcgcttaaa 660 gcgatgatag cgagtggaga cttctccggg ttcgacggaa cagtgtcaaa aacagatttg 720 gtattaaatt acatattcta caagaacatc tatagaagtg aataccatct catgctcaaa 780 acccggtggg aacattggat gtgggcgtta gtcataaacg accatgggca cgtcatcgtc 840 agcgacggac agagatcctc aggagatcaa gacacaagct ttggcaatac aatgatcaat 900 ggtatttacc attttgccag tacagcactc tccttgggga tatcaattga agaggcaaca 960 accccaattg gggaagtatg gttccggagt gactttgact atacaacacc gaagtacaag 1020 aaattgtact tacatcgaat cagtcacatt tcagacggag acgacaacct gcacttcggg 1080 agcaaagagg acattgaaaa gttcgacaag aatggaccca tgctcctgga acgtgcagga 1140 aagaagatta gatgcggaac tcgatccggt tacgacctga cggaaagcta ctcagggatc 1200 agttactgca gtcataacta caaccgatgt agaatcggaa aaatctcaac accagtagaa 1260 atgacagaaa tgtcgggggt ggcagaaatg gtgcccatcg attgtgtccc caaaacattc 1320 aaaaaggtgg acaatgacaa tctcccgtta caacatctga gggacaaaaa attaggcctc 1380 cgggtcgaat atatgccagc cagagctatg agcgaaataa tcggcaagct ggtaatgacg 1440 atgaagggca gcaccgccaa catggacttc acgagagatt acggctcatc gacaaaggag 1500 cagaagagag gccaaaagaa cgaagaggcc attgccataa cacgaggcaa actgctcagc 1560 tacctactga attattgtca gtattcagtg gtcagaattt tagtgatgag tgcgttttcc 1620 attattggag acggtgtctg caacttgcag gaattaaagc gtcggtacaa cgtgcctagc 1680 ataaccaaga cgattggttc tgccttgcgc ggggtattca acatctcgac gct 1733 //