ID AB796371; SV 1; linear; genomic RNA; STD; VRL; 1667 BP. XX AC AB796371; XX DT 15-MAR-2013 (Rel. 116, Created) DT 30-SEP-2013 (Rel. 118, Last updated, Version 2) XX DE Gentian Kobu-sho-associated virus gene for hypothetical polyprotein, DE putative helicase domain, partial cds, isolate: Yg. XX KW . XX OS Gentian Kobu-sho-associated virus OC Viruses; Riboviria; dsRNA viruses. XX RN [1] RP 1-1667 RA Atsumi G., Sekine K.T.; RT ; RL Submitted (07-MAR-2013) to the INSDC. RL Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita, RL Kitakami, Iwate 024-0003, Japan URL :http://www.ibrc.or.jp XX RN [2] RX DOI; 10.1099/vir.0.053637-0. RX PUBMED; 23907397. RA Atsumi G., Tomita R., Kobayashi K., Sekine K.; RT "Prevalence and genetic diversity of an unusual virus associated with RT Kobu-sho disease of gentian in Japan"; RL J. Gen. Virol. 94(Pt 10):2360-2365(2013). XX DR MD5; 42bfd2f78a0edb69e6c476f3d2e8ee85. XX FH Key Location/Qualifiers FH FT source 1..1667 FT /organism="Gentian Kobu-sho-associated virus" FT /host="Gentiana sp." FT /isolate="Yg" FT /mol_type="genomic RNA" FT /country="Japan:Yamagata, Kaminoyama" FT /isolation_source="Kobu-sho-affected stem" FT /collection_date="2009" FT /db_xref="taxon:1150353" FT CDS <1..>1667 FT /codon_start=2 FT /transl_table=1 FT /product="hypothetical polyprotein" FT /note="putative helicase domain" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:M4ZT93" FT /protein_id="BAM99912.1" FT /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH FT PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR FT LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC FT TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS FT RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIKK FT FDSVTEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG FT VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE FT DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTITTPLPEMTDFPRHAMSGAYL FT TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKDFR FT ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP" XX SQ Sequence 1667 BP; 514 A; 335 C; 429 G; 389 T; 0 other; gaagacaggc gagtccaaga tggttgatca cttcgccttt attgatgtct cccgagatgg 60 acaggttatt cctgttcctt ttgttgacag aactaagggt tatagtggac ttccaatctt 120 ggatgagttt ggacacccgg tagggatttt tggattcctt aggacaatga gagctaagac 180 agaaaatggt gtcattgata gaccagagag cgctcgtcca agcgtgcaag tgggacaatt 240 tgacataaca acgaaagccg tcgacgtatt acaagcggtc agaggagctg gcgcaaatgg 300 caagtggctt agactcgggg ctccaacagc ctctggaaag agtacaagac tcgtgaaaga 360 aatcggaagg ataatgtacc aaaaggcccg taggcctatc catattgccg tgcttgaacc 420 tagagtgttt gtcgtaaaca acttgtggca agggcaaagc atgatgacta acgctgacgc 480 gaaggattgc acattcttta acatcgtccg taagcacgga cgattgtacg aaaatgacaa 540 aacacaatca cataaagacc caagccaggc gaaagtcact ataacataca tgacctatgg 600 atcaatggtg gccagtctag gaaaagagct cagatgggat ctagttattc tggacgagtt 660 ccacagtcga agcgatagtg atgtgttggc agtcgatgcc gcactgcaag tgttgggaca 720 ttacaacggt gtcatggcaa tgaccgcaac cttctgggca ccagacccaa caatgaatag 780 atttgttgat tactcaattg gaacagcgaa gaagttccca atcgagagaa aggtaattaa 840 gaaattcgat tccgtcactg aaggtgaaga agggctgtat ttcaagatca gaggccctga 900 cggtacattc tacgccctgc caagggaaag ttgcaatgca ggagggaaga ctatcgtttt 960 cctagatagt aaaaacaact gtgcgaaagg aatgaaggaa ctcttggcga caggaccggg 1020 agtgaatgtg atgacgctta caagtgagaa cagagacgtc gaaattccag acgggcaagt 1080 ggtgattttt gcaacaaatg ttgctgagag cggagtcaca attgttaatt gtgataatgt 1140 gattagcttc ggagtgcaaa ttgagccgca agcagggttt gatgtaaacc ttggagaaga 1200 tgggaccttt gactcctatc attcacttgt acaaacaaaa ataacaactt gtgcagaaac 1260 tcaacaaatg ggaagaactg gaagaacatg tccaggaaca ttttggacaa caataactac 1320 gcctctccca gagatgactg atttccctag acacgcaatg tctggggcgt acttaacttt 1380 gatgagaaat gacgaagtca tggagatggc tgaggtcaga caacgtggtg gacagtggga 1440 agatctatta cacacgttga ggaacttaca tccaaagttt ttaccagcca gcctcaattt 1500 cagggctgtc aagggagagt accccagtat tactgagttg aaggacttta gagagctcca 1560 cattcgtgaa ggggcgcaag aggacatctt ttggcggaaa ctagaggttg ttcagtgtat 1620 tcaatacatt gacccaatca ccttctacct gctgcctaac ttcccaa 1667 //