ID   AB796356; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796356;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: NW40.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; e58ae515cb9c96bc9f54e8d28e48527a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="NW40"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Waga, Ryosawa"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZT80"
FT                   /protein_id="BAM99897.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIKK
FT                   FDSVIEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTMTTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKDFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 503 A; 343 C; 439 G; 382 T; 0 other;
     gaagacaggc gagtccaaga tggtcgacca ctttgccttt attgatgtct cccgagatgg        60
     gcaggttatt cctgttcctt ttgttgacag aactaaaggc tatagcgggc tcccaatctt       120
     ggatgagttt ggacacccag taggaatttt tggattcctt aggactatga gagccaaaac       180
     ggaaaatggc gtcattgata gaccagagag cgctcgtcca agcgtgcaag tggggcagtt       240
     tgatataaca acaaaggctg ttgatgtgtt gcaagcagtc agaggagctg gcgcaaatgg       300
     aaagtggctc agactcgggg ccccaacagc ctctggtaag agtacaaggc ttgtgaagga       360
     aatcggaaga ataatgtatc aaaaggctcg caggcctatc catattgccg tgcttgaacc       420
     tagagtgttt gtcgtaaaca acttgtggca agggcaaagc atgatgacta acgctgacgc       480
     gaaggattgc acattcttta acatcgtccg taagcacgga cgattgtacg aaaatgacaa       540
     aacacaatca cataaagacc caagccaggc gaaagtcact ataacataca tgacctatgg       600
     atcaatggtg gccagtctag ggaaagaact caggtgggat ttagttatcc ttgacgagtt       660
     tcacagtcgg agtgacagtg acgtgttggc agtcgatgcc gcactgcaag tattgggaca       720
     ttataatgga gtcatggcga tgaccgcaac tttctgggca ccagatccaa cgatgaacag       780
     gtttgttgat tactctatcg ggacggcgaa gaaattccca atcgagagaa aggtgatcaa       840
     gaaattcgat tccgtcattg aaggtgaaga agggctgtat ttcaagatca gaggccctga       900
     cggtacattc tacgctctac caagggagag ttgcaacgca ggagggaaaa ctatcgtttt       960
     cctagatagt aaaaacaact gcgcgaaagg aatgaaggaa ctcttggcaa caggaccggg      1020
     agtgaatgta atgaccctta caagcgaaaa cagggatgtc gaaattccag acggacaagt      1080
     ggtgatattc gctacaaatg ttgctgagag cggagtcaca attgttaatt gcgacaacgt      1140
     aataagcttc ggagtgcaga ttgagccaca ggcggggttt gatgtcaatt taggagaaga      1200
     cggaactttt gactcttatc actcacttgt gcaaacaaaa ataacgactt gtgcagaaac      1260
     ccagcaaatg ggaagaaccg ggagaacatg cccaggaaca ttttggacga caatgacaac      1320
     acctctcccg gagatgacag acttccccag gcacgcaatg tctggggcat acttaacttt      1380
     gatgagaaat gatgaggtca tggagatggc tgaggttaga caacgtggcg gacagtggga      1440
     agatttgcta cacacgttga ggaatttaca tccaaaattt ttaccagcca gcctcaattt      1500
     cagggctgtc aagggagagt accccagtat tactgagttg aaggacttta gggagctcca      1560
     catccgtgaa ggggcgcaag aggacatctt ttggaggaaa ctggaggttg ttcagtgcat      1620
     ccaatacatt gaccctatca ccttctatct tctacccaat ttcccaa                    1667
//