ID   AB583210; SV 1; linear; genomic RNA; STD; VRL; 1413 BP.
XX
AC   AB583210;
XX
DT   27-FEB-2011 (Rel. 108, Created)
DT   12-DEC-2012 (Rel. 115, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds, isolate: Mp6.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1413
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Contact:Ok-Kyung Kim Tokyo University of Agriculture, Department of
RL   International Agricultural Development, Graduate School of Agriculture;
RL   Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
XX
RN   [2]
RA   Kim O., Natsuaki K.T., Lee K., Khin S.;
RT   "High genetic diversity among natural populations of Papaya ringspot virus
RT   from cucurbits in Myanmar";
RL   Unpublished.
XX
DR   MD5; 4ca32a6880c7e6d4e88bf1735170e675.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1413
FT                   /organism="Papaya ringspot virus"
FT                   /segment="3"
FT                   /host="Cucurbita moschata Duch. ex Lam."
FT                   /isolate="Mp6"
FT                   /mol_type="genomic RNA"
FT                   /country="Myanmar:Shan state"
FT                   /collection_date="Sep-2007"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1207
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:L7MTI3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7MTI3"
FT                   /protein_id="BAJ78603.1"
FT                   /translation="KSKLPEHRLEAITAAMVESWGYEELTHQIRRFYQWVLEQAPFNEL
FT                   AKQGRAPYVSEVGLRRLYTSKRGSMDELEAYIDKYFERERGDSPELLVYHESRSTGDCQ
FT                   FTRCSNTHVFHQSKNEAVDAGLNEKLKEKEKEKEKDKQKAKDNDGASDGNNVSTSTKTG
FT                   ERDRDVNAGTSGTFTVPRIKSFTDKMVLPRIKGKTVLNLNHLLQYNPQQIDISNTRATQ
FT                   SQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIK
FT                   PLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEV
FT                   NSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGM
FT                   RN"
FT   mat_peptide     <1..349
FT                   /gene="NIb"
FT                   /product="nuclear inclusion b"
FT   mat_peptide     350..1204
FT                   /gene="CP"
FT                   /product="capsid protein"
FT   3'UTR           1208..1413
XX
SQ   Sequence 1413 BP; 440 A; 267 C; 355 G; 351 T; 0 other;
     taaatctaag cttccagaac atcggttgga agctatcaca gcggcaatgg tagagtcatg        60
     ggggtatgag gagttaacgc accaaattcg cagattttat caatgggtgc ttgagcaggc       120
     cccattcaat gaattagcga agcaaggcag agctccatat gtgtctgagg ttggattgag       180
     gcgcttatac actagtaagc gtgggtcaat ggacgaattg gaagcctata tagataaata       240
     ttttgagcga gaaaggggag attcacctga gctactggtg tatcatgaat cgagaagcac       300
     tggcgattgt caatttaccc gctgcagtaa tacacacgtg ttccatcaat ccaagaatga       360
     agctgtggat gctggtctga atgaaaagct caaagagaaa gaaaaagaga aagaaaaaga       420
     taaacaaaaa gctaaagaca atgatggtgc tagtgacgga aacaatgtgt caactagcac       480
     aaaaactgga gagagagaca gagatgtcaa tgccggaact agtggaactt ttactgttcc       540
     gaggataaaa tcatttactg ataagatggt tttaccaaga attaagggaa aaactgtcct       600
     taatttaaat catcttcttc agtataatcc acaacaaatt gacatctcaa acactcgtgc       660
     cactcagtct cagtttgaga agtggtatga gggagtgagg aatgattatg gcctcaatga       720
     caacgaaatg caagtgatgt taaatggttt gatggtatgg tgtatcgaaa atggtacatc       780
     tccagacata tctggtgtct gggtaatgat ggatggggaa acccaagtcg attatcccat       840
     taaaccttta attgaacacg caactccttc atttaggcaa atcatggctc acttcagtaa       900
     cgcggcagag gcatacatcg cgaagaggaa tgcgactgag aggtacatgc cgcggtatgg       960
     aatcaagagg aatttgactg acattagtct cgctagatat gctttcgatt tctatgaggt      1020
     gaattcgaaa acacctgata gggctcgcga agctcatatg cagatgaagg ctgcagcgct      1080
     acgcaataca aatcgcagaa tgtttggaat ggacggcagt gtcagtaaca aggaagaaaa      1140
     cacggagaga cacacggtgg aagatgtcaa cagagacatg cactctctcc tgggtatgcg      1200
     caattgaata ctcgcgctag tgtgttcgtc gggcctggct cgaccctgtt tcaccttata      1260
     atactataca agcattagaa tacagtgtgg ctgcgccacc gcttctattt tacagtgagg      1320
     gtagccctcc gtgcttttag tgttattcga gttctctgag tctccataca gtgtgggtgg      1380
     cccacgtgtt atccgagcct cttggaatga gag                                   1413
//