ID AB430770; SV 1; linear; genomic RNA; STD; VRL; 3585 BP. XX AC AB430770; XX DT 06-SEP-2008 (Rel. 97, Created) DT 30-JAN-2009 (Rel. 99, Last updated, Version 2) XX DE Barley yellow mosaic virus genomic RNA, segment RNA2, complete sequence, DE strain: BaYMV-IV. XX KW . XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3585 RA Nishigawa H., Natsuaki T.; RT ; RL Submitted (28-MAR-2008) to the INSDC. RL Contact:Hisashi Nishigawa Utsunomiya University, Center for Bioscience RL Research & Education; Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan XX RN [2] RX DOI; 10.1007/s00705-008-0163-1. RX PUBMED; 18636220. RA Nishigawa H., Hagiwara T., Yumoto M., Sotome T., Kato T., Natsuaki T.; RT "Molecular phylogenetic analysis of Barley yellow mosaic virus"; RL Arch. Virol. 153(9):1783-1786(2008). XX DR MD5; 759bfc05c629b1d85f57e138d9894d06. XX FH Key Location/Qualifiers FH FT source 1..3585 FT /organism="Barley yellow mosaic virus" FT /segment="RNA2" FT /strain="BaYMV-IV" FT /mol_type="genomic RNA" FT /country="Japan:Tochigi" FT /isolation_source="Barley cv. Sachiho Golden" FT /db_xref="taxon:12465" FT CDS 155..2827 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:B5BSW6" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:B5BSW6" FT /protein_id="BAG70354.1" FT /translation="MSASSSRLLFDCGSLDWPNKSLFGDPTTRDVMNEHISSTWNAVIR FT GHMLAPNADAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRVSAPLSTAESILC FT ADASHAPWLYMANGVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITFENARSF FT SRFLEQLPDILGAYPTLAAIYKTMLFAIRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFVALITNNLNSDLLDGIVGSNGDGEHYTNWNSGHDHWIVNRFITV FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYSQGAENAYLLLSC FT ERVGNELVAVQDALQEPLTNYSGLDLRALIINLGGLPSRHSDICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDMLSSSMANLFSNFVSESTNGQYRVKEPRPVAQYRVEHDEPV FT ASSAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRMKFQAKNSFPWFTISGDDDSPPP FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPAIIQSLRTL FT ELQLEARGLRFNVAGTPANLIQRGVNSSVGRALVRLTQSALLATGENFRTRMATTLERI FT AAERLNTLTAYDQRVIEMTTELLAAIRTALEVERSELTPHLANAEALLQVYNNLFSTDY FT VSASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSITKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPHVAAPVPNPFRAFSG FT RGHSLTTTRGVGPFRRPRV" XX SQ Sequence 3585 BP; 924 A; 915 C; 773 G; 973 T; 0 other; aaaataaaac aaccctaaac caaaacaaac aaaacaaaac aaacacaaac atcacacgct 60 ccccaagctc gcaatacttg tagagtgatt tctgtcatcc tactgtttgc aagctttcca 120 gcaaagcaat ccgcttgctt tcaaaccctc catcatgtct gcttctagct cacggctgct 180 cttcgactgt ggcagtcttg actggccaaa taagagctta tttggcgatc ctacaacgcg 240 agatgtcatg aacgaacaca tttccagcac gtggaatgcg gttattagag ggcacatgtt 300 ggcgcccaat gccgacgccg agactatatt gggccgtgat ggtttaccat ctgctcaatt 360 tgacgcttat ggagccatgc taccgagctt catccaagct ctaaatgcac ccacaacgcg 420 tctccgagtc agcgcaccgc tgtccaccgc tgagtctatc ttgtgcgctg atgcatccca 480 cgctccttgg ttgtacatgg caaacggtgt gtgcgcatac gaagcaactc atctgcaacc 540 tgtacaaact tttatcgctt tcaactttgc gcatggctat tgttacctca gtctcttcat 600 accactaagc tttcgcatta ccttcgagaa tgctcgaagt ttcagtcggt tcctcgagca 660 gcttcctgac attttaggtg cgtatccaac attggccgca atatataaaa caatgctatt 720 cgctattagg cttttcccag aggtgctaca agctccaatt cccatcatcg cgaaaaggcc 780 cggcgtgctc caattccacg ttagtgatgc tagaggacta ccaccctcat ggttccccat 840 gaagtgtggc agcgtagcat ctttcgtagc actcattacc aacaacctga acagtgattt 900 gcttgatgga attgttggtt caaatggcga tggcgagcac tacacaaatt ggaactctgg 960 acatgatcac tggattgtga atcgattcat aacagtcaaa gatttgcaca gcagcttaaa 1020 gtcagctctg gaggttgact tggacacaga gggtgggcga aatgccgttc tcgatttgct 1080 tctagatctt ggggtcacta atcttgttcg aagagagaaa cgcttcccag catactccca 1140 aggagctgaa aacgcatatc tacttctatc gtgcgagaga gttgggaacg agttagtagc 1200 cgtgcaagat gctctgcagg aaccattgac taattattct ggattagatt tgagagctct 1260 catcatcaat cttggcggtt taccaagcag acactctgat atttgctaca cacgcaacat 1320 ttttgaaaac gataatcatc tggtttggaa ctttgagttc taccggatag cctcaatcac 1380 gaagaatgca caaattgaca gagatatgct gagctcatcc atggcgaact tgtttagcaa 1440 ctttgtttca gaatcgacaa atggtcagta cagagtcaaa gaaccaagac ctgtcgctca 1500 gtacagagtt gagcatgatg aaccagttgc tagtagtgcc ccatctgctt ggtggcaagt 1560 tcttattggc atcaccaccg caatccttgg cgcaataata ttctttctct ggaggtgttt 1620 cttacgtgct aagcgtatga aattccaggc aaagaactcc ttcccatggt ttactatatc 1680 tggtgacgat gactcaccgc ctccccctgg tgactccccg tcgcgccctc ctggacgcag 1740 cccagatcga gttcttccgc gcacagttgt tcgagatctt agcttcaatg acgatgatga 1800 cttacatagc gttgatctca acgaagctgg atcgcgtttt ggggaggttg tctctttaat 1860 tgcaagggga aatcttcgcg agttagctgg tgcaattcct gagtctctca gcaacttaac 1920 cctccttcaa acaagtgcaa gtgggtcagg tttttacact atggtggctt tgtaccttgc 1980 cactttaggg gatgctatca ctgcatttca tgagcacaat gatgcctcac ctgccataat 2040 tcaatcactg cgaacgctcg aacttcagct tgaagcccgt ggtttgcgtt tcaatgtagc 2100 tggtacaccc gcaaatctca ttcagagggg cgttaattct tctgttggta gagcacttgt 2160 gcgactcaca cagagtgctc tcctagctac tggtgagaac tttcgaacac gcatggcaac 2220 cacacttgaa agaattgctg ctgagcgtct taacacatta accgcttatg atcagcgagt 2280 tattgaaatg acaactgagc tcctagcagc tattagaacc gctcttgagg ttgagcgcag 2340 tgagctcact ccacatctcg cgaacgccga ggctttgctt caagtttaca ataatctctt 2400 cagtaccgac tacgtttcag cgtcgttgct tgctcttagg cgcgagatga tccttaggag 2460 tgctgaaggg cgtgttggag aacagcccac tagcgcttct gacgctgcta acgaggagtt 2520 ggttcaacgt tctataacaa aattggataa ggaaattgag ttgttccagg cacaaattga 2580 tagccagcgc cgcgccgtca ccataactga agcatccaat ctcagagaaa atatattaca 2640 gccaatcaac actgttgcaa atattgccat ggctggagct tttctgcgtg ggggcgcgcg 2700 tcaccgcatg ccaggaatgc cacacgtagc tgcgcccgtg cccaaccctt ttcgagcttt 2760 ctcagggagg ggacattcac tcaccacaac tcgaggtgtt ggtcctttcc ggcgccctcg 2820 agtctagaat tctcatcata gtagcattta ctttccatcg ccttagcata gtttagatca 2880 acatcatcca tttctccatc ctttcgccat ctgcacacca ttgccattaa tatggtagag 2940 ttagcgattc atcccttgct acgctcaaaa gtctccatct ttagaccacc tgcaaacaca 3000 caaaatacca aaaataccat ttatcattct gtttcaaacg ccagcatttt aaattacccg 3060 caattgcatt atcgtttcgc catcaaagta tggttcgttt catcaacatc tgctcgcacg 3120 attgggtgta tggggccagt gttgtttcgg gtatggaatt caaatggtaa gaaatttatt 3180 cttctcacta tgagtttttc agggaataag ttcggtgcta cagctagcgg ctgtatcctt 3240 aacgatgccc cacaccacga aacaccattg attcttcgga attagccttt caaatatccc 3300 aactgcaatg agcacgatag cattgcatct ccactcaagg tccggttaga gtccctggca 3360 ggtgtgggct acaggagcat gggaatgctt ctctgtcacc atctgtcgtc tgcggcctct 3420 atctagcact acgagtggag ccacgtcttt aaatccccag catgtttact ttatgttctg 3480 catagaaaac gtcacatctg tgatacaaaa acatgcaaca cgtgcccatc atcggtcgcg 3540 ggttgtagtc tgacgaacaa caactttgta cacaggaaat gtgac 3585 //