ID   AB369271; SV 1; linear; genomic RNA; STD; VRL; 2215 BP.
XX
AC   AB369271;
XX
DT   28-NOV-2007 (Rel. 93, Created)
DT   28-NOV-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Cucumber mosaic virus RNA3, complete sequence, strain: PepY.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2215
RA   Sohn S., Choi S., Choi H., Kim K., Lee S., Ryu K., Choi J.;
RT   ;
RL   Submitted (23-NOV-2007) to the INSDC.
RL   Contact:S Sohn National Institute of Agricultural Biotechnology, RDA, Cell
RL   and Genetics; Suin-ro 322, Suwon 441707, South Korea
XX
RN   [2]
RA   Sohn S., Choi S., Choi H., Kim K., Lee S., Ryu K., Choi J.;
RT   "Genetic Variability of Pathogenicity of Cucumber mosaic virus strains
RT   isolated in Korea";
RL   Unpublished.
XX
DR   MD5; ef4fc7df27d9d55563ee9d225b6f72fa.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2215
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /strain="PepY"
FT                   /mol_type="genomic RNA"
FT                   /collected_by="Choi, JK"
FT                   /identified_by="Choi, JK"
FT                   /db_xref="taxon:12305"
FT   5'UTR           1..119
FT   CDS             120..959
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="3a MP"
FT                   /product="3a movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:A9EES2"
FT                   /protein_id="BAF93911.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLRNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A9EES5"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:A9EES5"
FT                   /protein_id="BAF93912.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGARSASSPSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMLADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2215 BP; 515 A; 521 C; 528 G; 651 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgctg tccgcacatt ttgttttatc tttgtacagt gtgttagatt tcccgaggca       120
     tggctttcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata atgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttccttct ttaaatctgg atatgatgtt ggtgaattgt       360
     gctcaaaagg atatatgagc gtcccccaag tgttatgtgc tgttactcgg acagtttcta       420
     ctgatgctga agggtccttg agaatttact tagctgatct aggtgacaag gagttatctc       480
     ctatagatgg acaatgcgtc tcgttacgca accatgatct ccccgctttg gtgtctttcc       540
     aacctacgta cgactgtcct atggaaacag ttgggaatcg taagcggtgt tttgctgtcg       600
     ttatcgaaag acatggttat attgggtata ccggtaccac agctagcgtg tgtagtaact       660
     ggcaagcaag gttttcttct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactgcc tttcaacaga ttagctgagc aaacaaaacc gtcagctgtc gctcgcctgt       780
     tgaagtcgca attgaacaac attgaatctt cgcaatatct gttaacgaat gcgaagatta       840
     atcaaaatgc gcgcagtgag tccgaggaat taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgc tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc gtattagtat ataagtattt gtgagtctgt acataatact atatctatag      1020
     tgtcctgtgt gagttgaaac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagcc tacatcacag ttttgaggtt caattcctct tactccctgt      1140
     tgagcccctt actttctcat ggatgcttct ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg      1260
     acaaatctga atcaaccagt gctggtcgta accgtcgacg tcgtccgcgt cgtggtgccc      1320
     gctccgcttc ctccccctcg gatgctaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaataagac gttagcagct ggtcgtccaa ctattaacca cccaaccttt gtagggagtg      1440
     agcgctgtaa acctggatac acgttcacat ctattaccct aaagccacca aaaatagacc      1500
     gcgggtctta ttatggtaaa aggttgttat tacctgattc agtcacggaa tatgataaga      1560
     aacttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta      1680
     tgcttgcgga cggagcctca ccggtactgg tttatcagta tgctgcatct ggagtccaag      1740
     ctaacaacaa attgttgtat gatctttcgg cgatgcgcgc tgatataggc gacatgagaa      1800
     agtacgccgt cctcgtgtat tcaaaagacg atgcgctcga gacggacgag ttggtacttc      1860
     atgttgacgt cgagcaccaa cgcattccca cgtctggggt gctcccagtc tgattccgtg      1920
     ttttccagaa ccctccctcc gatttctgtg gcgggagctg agttgtcagt tttgctataa      1980
     actgtctgaa gtcactaaac gttttacggt gaacgggttg tccatccagc ttacggctaa      2040
     aatggtcagt cgtggagaaa tctacgccag cggatctaca aatctctgag gcgcctttga      2100
     aaccatctcc taggtttctt cggaaggact tcggtccgtg tacttctagc acaacgtgct      2160
     agtttcaggg tacaggtgcc cccccacttt cgtgggggcc tctaaaagga gacca           2215
//