ID AB326223; SV 1; linear; genomic RNA; STD; VRL; 7548 BP. XX AC AB326223; XX DT 19-JUN-2007 (Rel. 92, Created) DT 17-AUG-2007 (Rel. 92, Last updated, Version 3) XX DE Apple chlorotic leaf spot virus genomic RNA, complete genome, strain: A4. XX KW . XX OS Apple chlorotic leaf spot virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-7548 RA Yoshikawa N., Yaegashi H.; RT ; RL Submitted (15-JUN-2007) to the INSDC. RL Nobuyuki Yoshikawa, Iwate University, Faculty of Agriculture; Ueda 3-18-8, RL Morioka, Iwate 020-8550, Japan (E-mail:yoshikawa@iwate-u.ac.jp, RL Tel:81-19-621-6150, Fax:81-19-621-6150) XX RN [2] RX DOI; 10.1099/vir.0.82984-0. RX PUBMED; 17698674. RA Yaegashi H., Isogai M., Tajima H., Sano T., Yoshikawa N.; RT "Combinations of two amino acids (Ala40 and Phe75 or Ser40 and Tyr75) in RT the coat protein of apple chlorotic leaf spot virus are crucial for RT infectivity"; RL J. Gen. Virol. 88(Pt 9):2611-2618(2007). XX DR MD5; 1770a443e2b17d373b4a355b1fcdd91c. DR EuropePMC; PMC4982687; 27519059. XX FH Key Location/Qualifiers FH FT source 1..7548 FT /organism="Apple chlorotic leaf spot virus" FT /sub_species="Plant virus" FT /strain="A4" FT /mol_type="genomic RNA" FT /country="Japan" FT /db_xref="taxon:12175" FT CDS 152..5809 FT /codon_start=1 FT /transl_table=1 FT /gene="POL" FT /product="RNA polymerase" FT /db_xref="GOA:A6BME6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008744" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:A6BME6" FT /protein_id="BAF64459.1" FT /translation="MAFSYRTPQEELLSRLPQSQQEAISGFQYERIQKEEEKKVENFSF FT YLPEKTREWFTKSGVYLSPFAYVNHSHPGCKTLENHLLFNVVASYISKYSYVACLSIKS FT NKMSKMERLGSNSVKTYDILNRLVTAKDKARYGPLARPERSPCPRRTNIFIHDEIHYWS FT RDQLETFLQVHRPKNLWATLVFPPEILAGYKSSVLPFLYQFEIHGKDLVYMPDGVRSES FT YTQPLENGFLLSSSSILTKNKVTGVEIRYQVSLVYSLGSHHLFHTYPTEDLMKEEVRRF FT GPYDLFDVGSLFVKPVRVPIQDFPLSVFKKIFIYLSSLKKPDVQSAVAKLRQLSDADIS FT IESVFMVQEFASRVEKNGVGSWSCSFWECMKDWFFDKLPYREVLEKIGLADDFTRRLMK FT IKPLAFDIHTTDRPLTVRMVIDQIWEERQSSCDDIPNVIFYGRKEWLEHGVVPKIKKGL FT IKLIPGREADTNDYPREIYSDLLSSTSIWKSYDDNLMHRSASPVVVFKSDKAYCEAAKF FT SSNCISLCATPQGEIVEKTPFEVERKAKLRQLSLSCLDFHMRKMKVKSTNELEIKLGEQ FT NKEALRRQKRKEKIKKSRMIPVHLLAQSQCKRKESELPLNGEEKGKXVDSDPKISGLQR FT NVMADETSDGESVVTAKMVNIDGSQSALGLYGLIGKEQLCSSGLIKTVGNDYSALAERI FT ECMPLAQLRNKKAAYFCLDFPMVYFHDKVSYPTFEATGEIRQVIMDARSRWGVNFNSAL FT IQVYNDGCQLPLHSDSEECYDDDGILTINVCGDAKFHTTCHDEIIDLKQGNEVLMPSGY FT QRMNRHAVKVESEGRTSVTLRVHKRDFSFESKLKFIKGRFDCLFVSVAEIIHKKPEEIM FT MFLPHVVDRCISNRGCSLDDAKAICEKYEIKMECEGDCGLVECGTVGLSVGRMLLRGNH FT FTVASVRRSSMDSLANSSKELKSNGILDHVMFNFHKRLKLVEPDLTTADIKVDSSRAGK FT LLKSLMDGMAGIVSHNSTHEGWRMIKGINSTSEMRSFMGMVKGQSDEAKGDLFGKVQEL FT NFMKTKIYGIFGFAGSGKSHAIQNLIQTEFKGSQGIMVICPRRFLAKDWSEKGVDEKDI FT KTFESALKSDVKGKRLFILGEVSLLPKGFTDLLMLKMHMEGVLRQSTIVCIGDPLQAGY FT FCPKDDSYLSREGEIKRLFKEGVNYKWYSYRINKFVAKKLSVETMNDFIGIDEQSSIYK FT DMPSAHHFMDKKGNHIEVILVASMIEKELYSNYGNVMTFGESQGLTFNCGVIVLSEEAK FT LCSDAHIMVAITRFRRGFCFALGSKGSKEDYMRSMKSGLLQRMCSGIGASREFILGSSS FT VNLILSEKDIAKGAGVDEMDREARLEGDVWLKSMIYLGKRYHIVEPLGQVIKLTDSAIK FT CHIPMCSSQTLGPELDNIQAREFREFRGRNGWSNQFREEAGPNWKFPYKVNQAMSYEAV FT YPRHRMDDDLTFLAAIKKRLRFDNVANNYAKFKAAENRGKYLAKIFLKHVPIKCGRDQR FT LLDQCRQEFEETKLSKSAATIGAHSQRSDSDWPLDKIFLFMKSQLCTKFEKRFTEAKAG FT QTLACFPHKILVEFSPWCRYTEKVLTANLPDNYYIHQRKNFSELEDFAKRFSNGSVCVE FT SDYTAFDVSQDHTILAFEVELLKHFGWDDKVLQSYIKMKCTLGCRLGGFAIMRFTGEFS FT TFLFNTLANMVFTFCRYEVPDGTPICFAGDDMCALRNLREIDTHEFILSKLSLKAKVNR FT TKVPMFCGWRLCCDGLIKEPCLIYERLQVAIENRRLMDVIDSYFLEFSFAYKLGERLYS FT HLEIEQLNYHQVLTRFFIRNKHLLRGDSRHNISELEWLSDEDGDDDKGSQVEDRRRGYS FT NCWGEKLQNLF" FT CDS 5727..7103 FT /codon_start=1 FT /transl_table=1 FT /gene="MP" FT /product="movement protein" FT /db_xref="GOA:A6BME7" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:A6BME7" FT /protein_id="BAF64460.1" FT /translation="MMIRGHKLKIAEGDIPIAGVRSSRIYSDVSPFKRASDLMIHWNEF FT VFKVMPEDIAGDGFRLASIPVIPSSEVQAVLRKRESTNYVHWGALSISIDALFRKNAGV FT SGWCYVYDNRWETFEQAMLQKFRFNLDSGSATLVTSPNFPVALDDPGLSNSISVAVMFE FT NLNFKLESYPISVRVGNMCRFFDSLLSSVKNKVDSNFLLESANADPLGAGAFGFEQDDQ FT VSELFNYVQTVPTQAIKSREHEIPRGLFGMMGKKKVKSFEFASGSRSMERRRPQRGRPL FT ERSSSQRVVPGFKSQDEKIEHQGLSTDSDFENFLRSKGKGKAGPKSLVSEGSSVDNISA FT REFQFARQDQEKEDGGSAQPATKSGRRSESVPGRRRQTPSWKDRGNTGTDTGGHLREHS FT DPRDLGADGVPRRDGGSQVHGGPEGDRLLQSEGGGQFDKDLQDYIFGPEHKQHDLPPSL FT " FT CDS 6787..7368 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A6BME8" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:A6BME8" FT /protein_id="BAF64461.1" FT /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQTLEAIFANI FT AIQGTSEQTEFLDVMVEVKSMEDQKVIGSFNLKEVVSLIKIFKTTSSDPNINNMTFRQV FT CEAFAPEARNGLVKLKYKGVFTNLFSTMPEVGGKYPELMFDFNKGLNMFIMNKAQQKVI FT TNMNRRLLQTEFAKSENEAKMSSVTTDLCI" XX SQ Sequence 7548 BP; 2337 A; 1320 C; 1875 G; 2013 T; 3 other; tgatactgat acagtgtacc atcacgtcgt gagtagacag attgacgtaa cgcctcaatc 60 gtggtcaagg accagcattt caatgctatc acattaaata caatcacatt gtattccata 120 actttccgtt taaccacgtg aaaggtcaga gatggctttc tcatacagaa cgccacaaga 180 ggagctcttg agcagattac cccaatctca gcaagaagca attagcggat tccaatatga 240 acgcattcaa aaggargaag agaagaaggt ggaaaacttc tctttttact taccggagaa 300 aaccagggaa tggttcacca agtcaggtgt gtacctttca cccttcgctt atgtaaacca 360 ttcacacccc ggttgcaaaa ctctggagaa ccacctttta tttaatgttg tagctagtta 420 tattagtaaa tactcttatg tagcatgcct tagtattaag tctaataaaa tgagcaaaat 480 ggaacgactt ggctcaaatt cagttaagac ttatgatatt ttgaatagat tagttacagc 540 taaggataag gcgcgttatg ggcctttggc caggcctgag agatccccat gtccaagaag 600 aaccaatata ttcatccatg atgagattca ctattggtca agggatcagc ttgagacttt 660 ccttcaggtg cacaggccca aaaatttgtg ggcgaccttg gtttttcctc ctgagatact 720 tgccggttat aaatcttcag ttttgccatt tctctaccag tttgagatcc atggaaaaga 780 tttggtttac atgcctgatg gggttaggtc tgaaagctac acacaaccac tggaaaatgg 840 tttcttgctt agttcaagca gtatactcac gaaaaataag gtcacagggg ttgaaatcag 900 atatcaagtg agtctcgttt actcattagg ttctcatcac ctgttccaca cttaccctac 960 tgaggacctt atgaaagaag aagttagaag atttggaccc tatgatctat ttgatgtggg 1020 ctctctattt gtcaagccag ttcgtgtgcc catccaagat tttccattga gtgtatttaa 1080 gaaaatattc atatatctaa gctctttgaa gaaaccggat gtacaatctg ctgttgcaaa 1140 actcaggcaa ttatccgatg ctgacatctc aattgaaagt gtttttatgg tgcaggagtt 1200 cgcgagcagg gttgaaaaga atggagttgg gagttggtca tgttcattct gggagtgcat 1260 gaaggactgg ttctttgaca agctgccata tagagaggtg ttggaaaaga taggactagc 1320 agatgacttt actaggaggt tgatgaaaat taaacctctt gcttttgata tccacacaac 1380 ggacagacct ctcacagtta ggatggttat tgatcagata tgggaggaga ggcaaagttc 1440 ctgtgacgac attccgaatg tgatctttta cggaagaaag gaatggctcg agcacggggt 1500 ggttcccaaa ataaagaaag gtttgatcaa gttgattccc gggagggaag cagacacaaa 1560 tgattatcca agggagatat actctgattt gttgtcatcc acctcaatat ggaaatccta 1620 cgatgataat ctgatgcaca ggagtgcaag tccagttgtt gtgttcaagt ccgacaaggc 1680 ctattgtgaa gcagctaagt tcagctcaaa ctgcatcagt ttgtgtgcaa cccctcaggg 1740 tgagattgtg gaaaagaccc cttttgaggt ggaaaggaaa gcaaagctaa ggcagttgtc 1800 cttgagttgt ttggattttc acatgagaaa aatgaaggtg aagagcacaa atgagttaga 1860 aattaagttg ggtgagcaaa ataaggaagc attaagaagg cagaagagga aagaaaagat 1920 caagaaatca agaatgattc cagtacactt acttgcacaa tcccaatgca aaagaaaaga 1980 aagtgaactt cctttgaatg gagaagaaaa gggcaaggra gttgattcag atccaaaaat 2040 cagcggactt caaagaaatg tgatggctga tgaaaccagt gatggggaat cggtggtcac 2100 tgcaaaaatg gtgaacattg atggatctca atcggctttg gggttgtacg gtttgattgg 2160 aaaggagcaa ctttgttcct ctggcctaat taaaaccgtt gggaatgatt attccgcgct 2220 ggctgaacgg atagaatgta tgccacttgc tcaactgaga aacaaaaagg cggcatactt 2280 ttgccttgat tttcccatgg tgtatttcca cgacaaagtt tcctacccaa cctttgaagc 2340 aactggagaa atcaggcaag tgatcatgga tgcaagaagt agatggggag taaacttcaa 2400 tagcgcactg attcaggttt acaatgacgg gtgccaattg cctttgcata gcgatagtga 2460 ggaatgctat gatgatgatg ggatactcac catcaatgtc tgtggagatg caaagtttca 2520 caccacctgt catgatgaga tcatagatct caaacaagga aatgaggtgc tgatgccaag 2580 tggttatcaa agaatgaaca gacatgcagt aaaggttgag tcagaaggaa gaacaagtgt 2640 tactctcagg gttcacaaaa gggattttag ttttgagtcc aagctcaagt tcatcaaggg 2700 tcgatttgat tgcctttttg taagtgtagc ggagataata cataagaaac cagaggagat 2760 catgatgttt ctgccgcatg ttgtggacag gtgcataagc aataggggat gttcacttga 2820 tgacgccaag gcgatttgtg aaaagtatga aatcaaaatg gagtgtgaag gggattgtgg 2880 cctggtagaa tgtggaacag tgggcctgtc agttggaaga atgttgctaa ggggaaacca 2940 ttttacagtt gcttcagtca gaagatcatc tatggactca ctggccaatt cctcgaagga 3000 attgaagtcg aatgggattc tggatcatgt catgtttaat tttcacaaaa ggctcaagct 3060 tgttgaaccc gacttgacca cagcagacat caaggttgat tcctccaggg caggtaagtt 3120 actcaaaagt ctgatggatg ggatggcagg aatcgtatca cataactcaa cccatgaagg 3180 ttggagaatg atcaaaggaa taaatagcac ttcagaaatg aggtcattca tgggcatggt 3240 taagggtcaa agtgacgaag caaaagggga tctgtttggt aaagttcaag aattgaattt 3300 tatgaaaaca aagatttacg gtatatttgg tttcgcggga tcagggaaga gccatgcgat 3360 acaaaatctg atccaaacag aattcaaagg ttctcaagga atcatggtaa tttgccccag 3420 gagatttttg gcaaaggact ggagtgaaaa aggtgtggat gagaaggaca ttaagacttt 3480 tgaaagtgca ttaaaatcag atgttaaagg aaagagattg ttcatactcg gtgaagtgag 3540 tctgttaccc aaagggttta ctgacctttt aatgctcaag atgcacatgg agggagttct 3600 gagacaatcg actatcgtgt gcattggtga ccctcttcaa gctggttact tctgtcctaa 3660 ggatgacagt tatttgtcta gggaaggaga gatcaagagg cttttcaagg aaggcgtgaa 3720 ttacaagtgg tacagttaca ggatcaacaa atttgtggcg aagaaattgt ctgttgaaac 3780 catgaatgat tttatcggca tagatgagca gagttcaatc tacaaagata tgccctcagc 3840 tcaccacttc atggacaaga aagggaatca tatagaggtg attcttgttg ctagcatgat 3900 tgagaaggaa ctctactcaa attacggcaa tgtcatgact tttggtgagt cacaaggttt 3960 gacattcaac tgtggagtca tagtgctgtc tgaggaggca aaattgtgtt cagatgccca 4020 catcatggtt gcaataacaa gattcaggag aggattttgt ttcgcgctgg gaagcaaagg 4080 ttctaaagag gactacatga ggtcaatgaa gagtggactt ctccagagga tgtgttcagg 4140 aattggtgcg tcaagagagt ttatattggg ctcctcttca gtcaatctga tattgagtga 4200 gaaggatatt gccaagggtg ccggtgttga tgaaatggac agagaagcga gattggaggg 4260 tgacgtatgg ctcaaaagta tgatatacct tgggaaaaga tatcacattg tagagccact 4320 tggtcaggtg ataaagttga ccgacagtgc aatcaaatgc cacatcccta tgtgctccag 4380 ccaaacattg ggtccagagt tggataacat tcaggccagg gaattcaggg aattcagagg 4440 aagaaatgga tggtcaaacc agtttaggga agaggctggt ccaaattgga aatttcctta 4500 caaagtcaat caggcgatga gttatgaagc tgtgtacccg aggcatagga tggatgatga 4560 cttgactttc cttgctgcca tcaaaaagag acttcgtttt gacaacgttg caaacaatta 4620 tgcaaaattc aaagcagcag agaacagggg aaagtatctg gcaaaaatct tccttaagca 4680 tgttcccatc aaatgtggta gagaccagag actcttggat cagtgcagac aagaatttga 4740 agagaccaag ttgtcaaaaa gcgctgcaac aattggtgct cactcacaaa ggtctgattc 4800 cgattggcca cttgataaaa ttttcttgtt catgaagtca cagttgtgta ccaaattcga 4860 gaaaaggttt acagaagcaa aggcaggcca gactttagcc tgcttcccgc acaaaatcct 4920 tgtcgaattt agtccatggt gtaggtacac agagaaggta ctgacggcaa acttacctga 4980 caactactac atccaccaaa ggaagaactt cagtgaactt gaagattttg cgaagaggtt 5040 ttcaaatggc tcagtttgtg tggaatcaga ttacacagcc ttcgacgtct cacaggatca 5100 taccatattg gcatttgaag tggaattgct taaacatttt ggttgggatg acaaagtgct 5160 gcagagttac attaagatga aatgcacgtt gggctgtcgg ttggggggtt ttgctatcat 5220 gagattcact ggagaatttt caacattcct gttcaacaca cttgcaaata tggtgttcac 5280 gttttgcagg tatgaggtac ctgatggcac cccaatttgc tttgcagggg atgatatgtg 5340 tgctttgaga aatctgagag aaattgacac tcatgaattc atcttgagta aactgagtct 5400 caaagccaag gtaaacagaa caaaggtgcc tatgttctgt ggatggaggt tgtgttgtga 5460 tggactaatc aaagaaccct gtctgattta cgagaggctg caagtcgcta tcgagaacag 5520 aaggctgatg gacgtgatag actcgtattt cctggaattt tcatttgcct acaaattagg 5580 tgagaggctc tattcacatc ttgaaattga acagctgaat taccatcagg tattgaccag 5640 gttctttata agaaacaagc atttattaag aggtgattca aggcataaca tytcggaact 5700 tgagtggctt tctgacgaag atggcgatga tgataagggg tcacaagttg aagatcgcag 5760 aaggggatat tccaattgct ggggtgagaa gctccagaat ttattctgac gtaagtccct 5820 tcaaaagagc ctctgacctt atgattcact ggaatgaatt cgtttttaag gtcatgccag 5880 aggacatagc aggtgatggt ttcagattgg cttctatacc cgtcatacca tcctccgaag 5940 ttcaggcggt gctgaggaaa agggagagta cgaattatgt gcattgggga gcattgtcga 6000 tatccattga cgcgttgttc agaaaaaatg ctggggtgtc aggatggtgt tatgtatatg 6060 ataacaggtg ggagacattt gaacaggcca tgttgcaaaa gttccgattc aatttggaca 6120 gtggctcggc aacgctggtg acatcaccaa attttccggt cgcattggat gatccaggct 6180 tgtctaattc aatcagcgtg gccgtgatgt ttgagaatct aaatttcaag cttgagagtt 6240 accctataag cgttagggtg ggtaacatgt gcaggttctt tgatagcctc cttagcagtg 6300 tgaaaaacaa ggttgattca aattttctgc ttgaatctgc aaatgcggac cctttgggag 6360 ctggggcctt cggatttgag caagatgacc aggtcagcga gttgtttaac tacgtccaga 6420 ctgtgccaac tcaggcaatc aagtcgagag aacatgaaat accaagaggt ctgtttggaa 6480 tgatggggaa gaagaaggtg aaatcttttg agtttgcttc tggttcaagg agcatggaga 6540 gaagaagacc acagaggggc agaccacttg agaggtcctc cagccagaga gttgttcctg 6600 gatttaagtc ccaggatgag aaaattgaac atcaaggatt atcaactgat agcgattttg 6660 agaattttct caggagcaaa gggaaaggta aagctggacc aaaatctctt gtttcagaag 6720 ggtcatctgt ggataacata tctgcaagag aatttcagtt tgctcgacaa gatcaggaga 6780 aggaggatgg cggcagtgct caacctgcaa ctaaaagtgg acgcagatct gaaagcgttc 6840 ctggccgcag aaggcagacc ccttcatgga aagacagggg caatactgga acagacactg 6900 gaggccatct tcgcgaacat agcgatccaa gggacctcgg agcagacgga gttcctcgac 6960 gtgatggtgg aagtcaagtc catggaggac cagaaggtga taggctcctt caatctgaag 7020 gaggtggtca gtttgataaa gatcttcaag actacatctt cggacccgaa cataaacaac 7080 atgaccttcc gccaagtttg tgaagctttt gccccggagg cgagaaatgg gctggttaaa 7140 ctgaagtata aaggggtttt tacaaaccta ttttctacta tgccagaagt tggaggtaag 7200 tacccagagc tcatgttcga tttcaataaa gggctgaaca tgtttattat gaacaaagct 7260 cagcaaaaag taattactaa tatgaatcgg cgtcttttac aaactgaatt tgcaaagagc 7320 gaaaatgagg caaagatgtc atctgttaca actgatcttt gcatttagct tgtggaagaa 7380 actcggttca ataaataaaa taaataaata taataaataa ttaattaagt tgtgtgttaa 7440 ttaatgtcaa actcttgaac ccatgaaaga gtataaagag tcatggtatt taaatggagt 7500 gtttagactt ataataaata gcctgtagac ttttaaatat tttactac 7548 //