ID AB206396; SV 1; linear; genomic RNA; STD; VRL; 7009 BP. XX AC AB206396; XX DT 06-SEP-2005 (Rel. 85, Created) DT 31-MAY-2006 (Rel. 88, Last updated, Version 4) XX DE Alstroemeria virus x genomic RNA, complete genome. XX KW . XX OS Alstroemeria virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-7009 RA Fuji S., Furuya H., Naito H., Fukumoto F.; RT ; RL Submitted (04-MAR-2005) to the INSDC. RL Shin-ichi Fuji, Akita Prefectural university, Bioresource Sciences; RL Shimoshinjo, Akita, Akita 010-0195, Japan (E-mail:sfuji@akita-pu.ac.jp, RL Tel:81-18-872-1640, Fax:81-18-872-1678) XX RN [2] RX DOI; 10.1007/s00705-005-0574-1. RX PUBMED; 15986173. RA Fuji S., Shinoda K., Ikeda M., Furuya H., Naito H., Fukumoto H.; RT "Complete nucleotide sequence of the new potexvirus "Alstroemeria virus X". RT Brief report"; RL Arch. Virol. 150(11):2377-2385(2005). XX DR MD5; ef2b3e06225a6de17d953591621a70fe. XX FH Key Location/Qualifiers FH FT source 1..7009 FT /organism="Alstroemeria virus X" FT /mol_type="genomic RNA" FT /country="Japan" FT /db_xref="taxon:316983" FT CDS 98..5038 FT /codon_start=1 FT /transl_table=1 FT /product="replicase protein" FT /note="ORF1" FT /db_xref="GOA:Q3V6G7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q3V6G7" FT /protein_id="BAE44211.1" FT /translation="MSKIRNVLDKIRDPSVQTAICENAYAQMRPVLKEALVNCPYALTD FT LEADALENMGISVNPYATQTHTHAACKAIENQMLQIVGHHLPKSKVTFLFLKRSKLRYM FT RRAAALNDHFMNKNVEPKDFFRYDSETVCANLSAVSTSIAYISDTLHFMTFEELANLFE FT TSPKLDTLLATVVLPVEALHKRTSLHPALYSINYNKDGFEYIPGNHGGGAYFHPYDTLQ FT WLKVRTLLCNSKHKGFPPFHLTFQMVESLGANHLFIIRRGKFETPLYRTFCRDTYVTFP FT KIFHPSTANANKPIQKQKAMQLWLYCKSVKAVTERDIYAKIRQVLRTEELELYEPAEVA FT HIVNYFYFIANLHSITCYEDLLSGSLLKRMTVPIRTAITKFVEVFRGKNDFVKLLDALK FT WDNFTYSIKPEDMTTKMDSHQVNHLVEEYGIPIKEAEATIAQLHREPELLNDADLDSPP FT MVDFLGRTTYEPFNYPRTTTPTDPKPAATTADDSASCSKPPNSAAGTSPSPNHTQPEKL FT KPDAQPTQDSATIPVHVSGWEREPFDYVFHTSQSQQLRGRKAAFLSTRQDIDYGHDKIR FT YDTNPWNEILTDFLRTVGFQANAVLIQVYEANAGIPWHRDDEKCYEKDAILTLNFGTAT FT FEFSNGTKLHLTDGCHFIMSGEWLDLKHRVTNCSADRMSLTFRVHKQDMFGHPIPKTTL FT VPEQQPEVDAGVDNHNLPKETPAQEPSEASTESGPNTTKPAPFVSQRQNTRSPEEKPTV FT TAVPWEAWKPLLNNHGFKADEQQLNPEGFLILPILDVHKVPHSKFPDTVPAKLQDTLTQ FT MKRFPVDITIQHQRAAAYASDIKNNRTGKLLSSMDNKWKASFAYKMQHEDITLTGTVIH FT GCGGSGKSHAIQQFIRTIPNDNNTITVVTPTVELRNDWSTKLPLSPPEMFKTFEKAITQ FT PCNPVVVFDDYTKMPPGYIEAVCMHHRQIEFVILTGDSKQSVYHEANTEAYISSMIEAV FT EVFEPFCEFYLNATHRNVKDLANKLGVYSERQGSLKITMASHHLKQSRIPLLVPSTMKR FT NAMLDIGHRCMTYAGCQGLTAPKVQILLDQHTQHCSERVLYTALSRAVDSIHFINTGPN FT STDYWQKLDSTPYLKAFIDTHRDEKTEMYNSQPADDSPTPVPAPKTHFPPAPSTLLENM FT VETLPDKEAREIYNKSLGYSNAIQTQDPVVQLFQHQQAKDETLYWATIEARLSISTPEA FT NLREFNLKKDVGDVLFANYAQIMHLPSEPVPFDDRMWEISETEVRNTYLSKPIGNLVNA FT ATRQSPDFNPNKIALFLKSQWVKKPEKLGALKVKPGQTVASFMQETVMLYGTMARYLRK FT QRQRFQPQNIFINCETTPDHLNEFIKSQWSFTQPAHTNDFTAFDQTQDGAMLQFEVLKA FT KFFNVPPEIIEGYIYIKLNAEIFLGTLGIMRLSGEGPTFDANTECSIAYNATRFFVDDS FT VAQVYAGDDMALDRVVQEKPSFKRLEHQLKLTSKPQYPSQTKGDYAEFCGWIFTPSGIM FT KHSLKMQASIQLQKKINNIAQSARSYALDLKYAYDMGDALQDHLTEAECELHAQSVRDM FT HLLHQHDVLVNGASSPPHPTQTTSAADIPTGSAKTKKRNLSKRKAKVAKIDSSGDFNFR FT CPSSPPRQ" FT CDS 5067..5771 FT /codon_start=1 FT /transl_table=1 FT /product="triple gene block protein 1" FT /note="ORF2" FT /db_xref="GOA:Q3V6G6" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q3V6G6" FT /protein_id="BAE44212.1" FT /translation="MALFYLQTLLLNSDFTRTTTPTASPLIIFGTAGCGKTSIIRALAS FT QFPELHFSSFHPIVLLPNIRKKQHLANPNEATDVLDEFLAGPNPEVRIAKFCDPLQYNC FT ETLPEPHFISETTYRFCPRTCELLNDIFKTTLKSKVLEICKVACVDPYAVDPVGKVIAI FT EQELFPILSAHGLTVHSPDFLTGQTIPEVSVYTLNLKRAVAEHPHLLFIALTRHSKTLH FT LFDLNAGPDTTA" FT CDS 5746..6078 FT /codon_start=1 FT /transl_table=1 FT /product="triple gene block protein 2" FT /note="ORF3" FT /db_xref="GOA:Q3V6G5" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q3V6G5" FT /protein_id="BAE44213.1" FT /translation="MPGLTPPPNYENVYKLVALGFICVGIILATKSNHNHHTGDQQHSL FT PFGGIYRDGTKTVSYFRPSDPITHSNKWLAFSSVITISLIIWLCSKFSPGDRRPLPPVC FT SHCTSH" FT CDS 5903..6202 FT /codon_start=1 FT /transl_table=1 FT /product="triple gene block protein 3" FT /note="ORF4" FT /db_xref="GOA:Q3V6G4" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q3V6G4" FT /protein_id="BAE44214.1" FT /translation="MAPKLSLTFALLTLSPTLINGWPSHQSSPSASSFGYVLNFLLVIG FT GLYLLYALTAPPTKAGCIVRVTGESVTIDNCPDTALIMEKFNLAPWNGVKFPKE" FT CDS 6240..6932 FT /transl_table=1 FT /product="coat protein" FT /note="ORF5" FT /db_xref="GOA:Q3V6G3" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q3V6G3" FT /protein_id="BAE44215.1" FT /translation="MAGENTPPTPPTAPAGSAADLANPNRSPTVSDLAKLNYQSTTTSV FT ATPEEITALGVLFTSAGVDPNSVPLAMWDLARAYADVQSSRSAMLVGSTPSNKSITRQT FT LARKLDQVNITPRQFCMYFAKVVWNILISSNTAPAGWAKLGYPEECKFAAFDFFDGVLS FT PAALDPADGLIRQPNTREIQAHSTAKFGALARQRISNGNFVSTLAEVTHGRVGGVNAMY FT SIEAPPEA" XX SQ Sequence 7009 BP; 2059 A; 2244 C; 1360 G; 1346 T; 0 other; ggaaaatcaa ttccaacaaa acaaaacaaa cttaaaacaa cattacacac ataaccacga 60 accaaaatcg gttaaaacaa aaccactttc gttcattatg tcgaaaatca gaaacgtgtt 120 ggacaaaatc agagacccat ctgtacaaac agcaatttgc gaaaatgctt atgcacaaat 180 gagacctgta ctcaaagagg cactagtcaa ttgcccttac gcactaaccg atctagaagc 240 cgacgctcta gaaaatatgg gtatatccgt aaatccttac gcgacacaga cccacacaca 300 cgcagcctgc aaagccatcg aaaaccagat gctgcaaata gtcggacacc acctcccaaa 360 gtccaaagtc actttcctct ttctgaagag aagtaaactc cgctacatgc gcagagctgc 420 tgctctcaac gatcacttca tgaacaaaaa tgtggagccc aaagacttct tcagatacga 480 ctctgaaact gtatgcgcaa acctcagtgc cgtatccacc agcatcgcat acatttccga 540 caccctacac ttcatgacat tcgaagaact tgccaacctc ttcgaaacga gcccgaagct 600 tgacactctg ctagcgactg tagtgctgcc cgtcgaagct ctgcacaaac gaacttcact 660 acaccccgct ctgtactcca tcaactacaa caaagacggg ttcgaataca tcccaggcaa 720 tcacggtgga ggagcctatt tccatcctta cgacacacta caatggctca aagtgaggac 780 cctactctgc aacagtaaac acaagggttt ccctcctttc cacctcacat tccaaatggt 840 agagagttta ggcgccaacc atcttttcat cataaggcgt ggaaaattcg aaacccccct 900 ctaccgcacc ttctgccgtg acacctacgt cacattccca aaaatcttcc atccatccac 960 cgccaacgcc aacaaaccca tccaaaaaca aaaagccatg cagctctggc tatactgcaa 1020 gtcagtcaaa gcagtaaccg aacgggacat ctatgccaaa ataaggcaag tactgcgaac 1080 cgaagaactt gagctgtacg agccggcgga ggtggcacac atagtaaact acttctactt 1140 catagcgaac ctccactcca tcacttgcta cgaagacctg ctgtcagggt cactactcaa 1200 aaggatgaca gtcccaatac gcacggccat cacaaagttc gtcgaggtct ttcgcggaaa 1260 gaatgacttt gtcaaacttt tggatgctct caagtgggac aactttacct acagcatcaa 1320 accggaggac atgaccacca aaatggactc acaccaggtc aaccacctcg tggaagagta 1380 tggcataccc atcaaagaag ctgaagcgac catcgctcag ctacaccgcg aaccagaact 1440 gctcaacgac gcggacttgg actccccacc catggtggat ttcctcggac gcactacata 1500 cgagcccttt aactatccca gaaccacaac cccgacagac cccaagccag ccgccacaac 1560 cgctgacgac tccgccagct gttccaaacc gcccaactcc gcagctggga ccagcccgag 1620 ccccaaccac acgcaacccg agaagctgaa acccgatgca caacccactc aggactccgc 1680 cacaatcccc gtccacgtct caggctggga aagagagccc ttcgactatg tgttccacac 1740 atcgcagagc caacaactac ggggacgcaa agcagccttc ctaagcaccc gacaagacat 1800 agactacggc catgacaaaa tccgatatga cacaaacccc tggaacgaga tactgactga 1860 ctttctcaga actgtgggtt tccaagccaa cgccgtcctg attcaagtct atgaagctaa 1920 cgcaggcata ccatggcaca gagacgacga aaagtgctac gaaaaagatg ccattctcac 1980 gctcaacttc ggcacagcca cctttgagtt ctcaaatggc actaagctgc acctgaccga 2040 cgggtgtcac ttcataatgt caggcgaatg gctggacctc aaacaccggg taacgaactg 2100 cagcgctgac cgcatgtccc tcactttccg tgtgcacaaa caggacatgt tcggccaccc 2160 catcccaaaa actaccctgg tgcccgaaca acaaccagaa gttgacgccg gtgtcgacaa 2220 tcacaacctg ccaaaagaaa cgccagccca agaaccaagt gaggccagca cagaaagtgg 2280 gcccaacacc acaaagccag ccccattcgt gagccagaga cagaacacgc gctcccccga 2340 ggaaaaaccc acggttactg ccgtgccctg ggaagcatgg aagccactcc tcaacaacca 2400 cggtttcaaa gccgatgaac agcaactcaa tcccgagggc ttcctcatac tcccaatttt 2460 agatgtacac aaggtgcccc actccaaatt cccagacacc gtcccagcaa agctgcaaga 2520 caccctcacc caaatgaaac gctttcccgt cgacatcacc atccagcacc aaagagccgc 2580 agcctacgct tccgacatca aaaacaaccg aacaggcaag ctacttagct ccatggacaa 2640 caaatggaaa gctagctttg catacaagat gcaacacgaa gacataaccc tgactggtac 2700 tgtgatccat gggtgtggag gttccggcaa aagtcacgcc attcaacagt tcatccggac 2760 cattcctaac gacaacaaca ccataacggt cgtcacccca acggtcgagc tgcgcaacga 2820 ctggagcacc aaattaccac tctcaccacc agagatgttc aagacgttcg aaaaagcgat 2880 cactcaaccc tgtaaccccg tcgttgtttt cgacgactac accaagatgc cccccggcta 2940 catcgaagca gtgtgtatgc accaccgcca gatcgaattc gtgatactca ccggggacag 3000 caaacagagc gtgtaccacg aagccaacac tgaggcctac atctcatcga tgatagaggc 3060 cgttgaagtt ttcgagccct tctgcgagtt ttacctaaat gccacacacc ggaacgtcaa 3120 agaccttgcc aacaaactcg gagtctactc agaaagacag ggttccctga aaatcaccat 3180 ggcatcacac cacctcaaac aatcgcgcat cccactgttg gtgccttcca ccatgaaacg 3240 caacgcaatg ctcgacatag gccaccgctg catgacctac gcgggatgcc aaggccttac 3300 cgcacccaaa gtccaaatct tgctggatca acacacacaa cactgctcgg aaagagtctt 3360 gtacactgca ctatctagag cggttgacag cattcacttc ataaacaccg ggcccaattc 3420 aaccgactac tggcagaaac tggatagcac cccgtacctc aaagctttca tcgacacaca 3480 ccgagacgag aaaacggaga tgtacaactc acaaccagca gacgacagcc caacgccggt 3540 cccagccccg aagacccatt ttcccccagc tcccagtacc ctgctggaaa acatggtcga 3600 aaccctcccc gacaaggaag cgagggagat ttataacaag agcctagggt acagcaacgc 3660 gatccaaact caggaccccg tcgttcaact gtttcaacac cagcaagcca aggatgaaac 3720 gctatactgg gccaccatcg aagcacgact ttccatctcc accccagaag cgaaccttcg 3780 agaatttaac ctgaagaaag atgtgggaga cgtgctcttc gccaactatg ctcagatcat 3840 gcatctaccc tcagaacccg tcccctttga cgacagaatg tgggagatca gcgaaacaga 3900 agttcgtaac acctaccttt ccaagcccat aggcaacctg gtcaatgccg ccacacgaca 3960 aagcccagac ttcaatccaa acaaaatcgc actctttctg aagtcccagt gggtcaagaa 4020 accagagaaa ctgggggcgc tgaaagtcaa acctggtcag actgtcgcct ccttcatgca 4080 ggaaactgtc atgctctacg gcacgatggc caggtatctg aggaaacaga gacaaagatt 4140 ccaaccccaa aacatcttca taaactgcga gaccacgccg gatcacctaa atgaatttat 4200 caaaagccag tggtctttca cacaacccgc ccacaccaac gatttcaccg cctttgacca 4260 aactcaggat ggcgccatgc tacaatttga ggttctcaaa gcgaaattct tcaacgttcc 4320 gcccgaaatc atcgaaggct acatatacat caaactcaac gcggaaatct tcctaggcac 4380 cctcgggatc atgagactca gcggtgaagg cccaactttc gacgctaaca cggaatgcag 4440 catcgcctac aacgcaacac gatttttcgt agacgactca gtcgcacaag tctacgccgg 4500 cgatgacatg gcattagatc gcgtggtgca ggagaaacct agcttcaaaa ggctggaaca 4560 tcagctcaag ctcacatcca aaccgcaata cccaagccaa acaaaaggtg actacgccga 4620 attctgcggg tggatattca cacctagcgg catcatgaag catagtctca aaatgcaggc 4680 ctccatccag ctccaaaaga aaatcaacaa catcgcccaa tcagctcgtt catacgcact 4740 ggatctgaag tacgcttacg acatgggtga cgcactacaa gaccatctaa ctgaagctga 4800 gtgtgaactg cacgctcaat cggtccgcga catgcaccta ctccaccaac atgacgtcct 4860 agtcaacggt gcttcaagcc ccccccatcc gacccaaaca acgtcagccg ctgacatccc 4920 cactggtagc gccaagacta agaaaagaaa cctatccaaa aggaaagcta aagtagccaa 4980 aatcgacagt agcggagatt tcaatttccg ttgccccagt tcccccccac gccaatagga 5040 gccgggttaa gtgtcctgat tgtgaaatgg ctttgttcta cctccaaact ttattactca 5100 acagtgattt caccaggacc acaaccccca cagctagccc cctcatcatc tttggtactg 5160 ctggctgtgg caaaacctca ataatccgcg ctctcgcttc ccaattcccc gaactccact 5220 tctctagctt tcaccccatc gtgctcctac ccaacatccg taagaaacag cacctagcca 5280 accccaacga agccactgac gtgttggacg aattccttgc tggccccaac cccgaagtcc 5340 gaatagccaa attctgcgac ccccttcaat acaactgtga gaccttgcca gaaccccact 5400 tcataagtga aaccacctac cgcttctgcc cacgcacctg tgaactactc aacgacatct 5460 tcaaaacaac tctcaagagc aaggttctag agatttgcaa agttgcgtgc gtcgacccat 5520 acgcagtaga ccccgtcggt aaagtgatcg ctatcgaaca agagttattc ccaattctaa 5580 gcgcacacgg cctgaccgta cactcacccg atttcctcac cggtcaaacc atacctgaag 5640 tttcagtgta cacactcaat ctcaagcggg ccgtagctga gcatcctcac ctcctcttca 5700 tcgccctcac ccgccacagc aaaacactcc acctcttcga cctcaatgcc gggcctgaca 5760 ccaccgccta actacgaaaa cgtgtacaaa ctggtggcac taggcttcat ctgcgtcggc 5820 atcatcctcg ctaccaaatc caaccacaac caccacaccg gcgaccagca acattcacta 5880 ccattcggcg gcatttacag ggatggcacc aaaactgtct cttactttcg cccttctgac 5940 cctatcaccc actctaataa atggctggcc ttctcatcag tcatcaccat cagcctcatc 6000 atttggctat gttctaaatt ttctcctggt gataggcggc ctctacctcc tgtatgctct 6060 cactgcacct cccactaagg ccggttgcat cgtacgcgtg acgggcgaaa gtgtgaccat 6120 agataattgc ccggacacag ctttaataat ggaaaaattc aatctcgctc cttggaacgg 6180 ggttaagttt ccaaaagaat gaaaatttta attataaacc agacaccttt cttaattaaa 6240 tggcaggaga aaacacacca cccacccccc cgacagcacc agccggctcc gctgccgacc 6300 tggctaaccc caaccgcagc cccacagttt ccgacctagc taaactcaac taccaatcga 6360 ccaccacctc agtcgccacc ccagaggaga tcactgccct tggtgtgctc ttcactagcg 6420 ccggcgtaga ccccaactca gttccactgg ccatgtggga tttagctcgg gcctatgctg 6480 acgttcagtc cagccgcagt gccatgctag tggggtccac tccatccaac aaatccatca 6540 cccgtcagac ccttgcccgc aagctggatc aagtcaacat cacgccacgc caattctgca 6600 tgtacttcgc aaaagtcgtg tggaatatcc tgatcagcag caacaccgca cccgccggct 6660 gggcaaagtt ggggtacccc gaagaatgca agttcgctgc attcgacttc ttcgacggtg 6720 tcctctcccc agccgcactt gatcccgctg acgggctcat cagacaaccc aacacccggg 6780 agatccaagc ccactcaacg gctaagtttg gagctctcgc ccgccaacgc atcagcaatg 6840 gcaatttcgt ctcaacactc gccgaggtca cccacggcag agtcggaggt gtcaatgcca 6900 tgtactccat cgaagccccc ccagaagcct aagcctttct ccttgcccaa cttaaataag 6960 gaggtgtttt tctacagttt tattttcact aatatactat gtgtgtgtt 7009 //