ID   AB194626; SV 1; linear; genomic RNA; STD; VRL; 867 BP.
XX
AC   AB194626;
XX
DT   07-JAN-2006 (Rel. 86, Created)
DT   08-DEC-2011 (Rel. 111, Last updated, Version 4)
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DE   Leek yellow stripe virus gene for coat protein, partial cds, isolate:
DE   Hokkaido.042.
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KW   .
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OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-867
RA   Sano T.;
RT   ;
RL   Submitted (08-NOV-2004) to the INSDC.
RL   Contact:Teruo Sano Hirosaki University, Faculty of Agriculture and Life
RL   Science; Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan URL   
RL   :http://nature.cc.hirosaki-u.ac.jp/lab/3/plapath/
XX
RN   [2]
RX   DOI; 10.1007/s00705-004-0482-9.
RX   PUBMED; 15703850.
RA   Takaki F., Sano T., Yamashita K., Fujita T., Ueda K., Kato T.;
RT   "Complete nucleotide sequences of attenuated and severe isolates of Leek
RT   yellow stripe virus from garlic in northern Japan: identification of three
RT   distinct virus types in garlic and leek world-wide";
RL   Arch. Virol. 150(6):1135-1149(2005).
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DR   MD5; b82e3069237b914cab2abc790859862f.
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FH   Key             Location/Qualifiers
FH
FT   source          1..867
FT                   /organism="Leek yellow stripe virus"
FT                   /host="Allium sativum"
FT                   /isolate="Hokkaido.042"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Hokkaido"
FT                   /note="synonym: Leek yellow stripe potyvirus"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..>867
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q2PH44"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q2PH44"
FT                   /protein_id="BAE72837.1"
FT                   /translation="ANDELDAGMQTSKKQKDGNDKSIEQRDPASSQFSPLGKKDGEGGS
FT                   GMSRNKDRDVNVGTTGTFSVPRIKQIPQKGISIPMDGGKSILNLDHLLQYKPNQLNISN
FT                   TRATVAQFKTWMERVQEDYGVTKGEMSIILNGLMVWCIENGTSPNINGTWTMMDGDEQV
FT                   AYPLRPIVEHAKPTLRQIMAHFSALAEAYIEMRNSEQAYMPRYGLQRNLTDMGLARYAF
FT                   DFYEVTSRTPVRAREAHAQMKAAALRNSRPRLFGLDGNVTTTDEDTERHTAHDVNARMH
FT                   HLDGAHMQ"
XX
SQ   Sequence 867 BP; 300 A; 172 C; 216 G; 179 T; 0 other;
     gctaatgatg aattagatgc aggcatgcaa acaagtaaga aacagaagga tggtaatgat        60
     aaatcaattg aacaacgcga tccagcatca tcacaattta gtccactagg caagaaagac       120
     ggtgaaggcg gttcaggaat gagtagaaac aaagacaggg atgtgaacgt tggcacaaca       180
     gggactttta gtgttccacg aatcaaacag ataccacaga aaggtatctc gataccaatg       240
     gacggaggaa agtcaatact caacttagac catttactac agtataaacc aaatcaattg       300
     aatatatcga acacaagagc cacagtggca caatttaaaa cctggatgga gagagtgcaa       360
     gaggattacg gtgtcactaa aggtgaaatg agcataattc tgaatggttt gatggtgtgg       420
     tgcatcgaaa atggaacctc accaaatata aatgggactt ggactatgat ggatggcgat       480
     gagcaagtcg cgtacccttt acggccgatc gttgaacatg cgaaaccaac cttacggcaa       540
     ataatggcgc atttttcagc actcgcggag gcgtacattg aaatgagaaa ttcagagcag       600
     gcttatatgc caagatatgg actacaaaga aatcttacag acatgggcct cgcacggtat       660
     gcatttgatt tttatgaagt cacatcaaga acaccagtta gagcgcgcga ggctcacgca       720
     caaatgaaag cagcggccct gcgtaattca aggccaaggc tgtttggact agacggtaac       780
     gtcacaacca cggatgagga cacggagagg cacacagcac atgacgtgaa tgcacggatg       840
     caccatcttg atggtgcgca tatgcag                                           867
//