ID   AB126031; SV 1; linear; genomic RNA; STD; VRL; 2037 BP.
XX
AC   AB126031;
XX
DT   11-MAY-2006 (Rel. 87, Created)
DT   11-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Alfalfa mosaic virus RNA 3, complete sequence, strain:AZ.
XX
KW   .
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-2037
RA   Ryu K.;
RT   ;
RL   Submitted (10-NOV-2003) to the INSDC.
RL   Kh Ryu, Seoul Women's University, Division of Environmental & Life
RL   Sciences; Nowon-ku,Kongnung 126, Seoul 139-774, SOUTH KOREA
RL   (E-mail:ryu@swu.ac.kr, URL:www.virusbank.org, Tel:82-2-970-5618,
RL   Fax:82-2-970-5610)
XX
RN   [2]
RA   Ryu K., Ha J.;
RT   "Complete nucleotide sequence analysis of genomic RNAs of Alfalfa mosaic
RT   virus";
RL   Unpublished.
XX
DR   MD5; 5fd3882bbd81361471383ee29451a183.
DR   RFAM; RF00252; Alfamo_CPB.
XX
CC   This sequence was obtained by the financial support by the
CC   BioGreen 21 proejct from the Rural Development Administration in
CC   2002-2003.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2037
FT                   /organism="Alfalfa mosaic virus"
FT                   /segment="RNA 3"
FT                   /strain="AZ"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12321"
FT   CDS             241..1143
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q1JV91"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JV91"
FT                   /protein_id="BAE94263.1"
FT                   /translation="MENTKTNASSSGMSSSSSFSVSYAEEMLLADEVSKINSMSILGPN
FT                   QLKLCTQLVLSNGAAPVILSLVSKEKKSILNRMLPKIGQRMYVHHSAIYLLYMPNILKS
FT                   SSGSITLKLFNEATGELVDVDTDHDATQACIFAGRYPRSILAKDAAKEHDWKISVHAVA
FT                   STNLNSAVGVLYPIWEDELSRKQILERGADFLKFPIAETEPVRDLLNAGKLTDFVLDRT
FT                   RLGVGSKNDPSPVLLEPRAKIAGKAKTVFIPEGPSVPNTTINGMAPTVRIDAGSPKGLG
FT                   VPKGFTYESFIKDEILPDH"
FT   CDS             1193..1858
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q1JV90"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JV90"
FT                   /protein_id="BAE94264.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVVKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLKDFAGPRILEEDLIYRMVFSITPSH
FT                   AGTFCLTDDVTTEDSRAVAHGNPMQEFPQGAFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKNPSYRFNEVWVERKAFPRAGPLRSLITVGLFDEADDLDRH"
FT   3'UTR           1859..2037
XX
SQ   Sequence 2037 BP; 545 A; 439 C; 459 G; 594 T; 0 other;
     gttttaaaac cattttcaaa atgttccaat tcaactcaat taacgctttt acagtgtaat        60
     tcgtactttt cgtaagtaag tttctgtaaa agcgtttctt gttttaattt ggtctaacac       120
     gtaattcgta ctcttcgtga gtaagttgtg ttagccatac ctatccttta aatctctgtc       180
     aatttaaaaa gaaaatcatt cccatttgcg taattcgtac tcttcgtgag taagttgtaa       240
     atggagaata caaaaacaaa tgcctcgagt tctggaatgt cttcttcctc cagcttttca       300
     gtgtcttatg ctgaggaaat gttactagct gatgaagttt caaaaattaa ctcaatgtcg       360
     attctgggtc ctaatcagct aaagctctgc actcaattgg tgctgtctaa tggagcagcg       420
     ccagtaattt taagccttgt gtcaaaggaa aagaaatcga ttttaaatcg tatgcttcct       480
     aagattggac agaggatgta cgtccaccac tcggctatct accttcttta tatgccaaat       540
     atactgaaaa gttcttcagg gagcatcacc ttgaaacttt ttaatgaagc tacaggagag       600
     ttagtggatg ttgacaccga ccatgatgct acccaggcat gtatatttgc tggacgttac       660
     ccccggagta ttctggcgaa agatgcagcg aaagaacacg actggaaaat ctccgtccac       720
     gctgttgctt cgaccaattt gaactctgct gtcggtgttc tataccctat ttgggaagat       780
     gagttaagca gaaagcagat cctcgaaagg ggtgccgatt tcctaaagtt tccaattgct       840
     gagaccgagc cagtccgcga tctcttaaat gctgggaagt tgacggactt tgttcttgat       900
     aggacaaggt taggtgtggg gtcaaagaat gatcccagtc cggttctttt agaaccaaga       960
     gccaagattg ccgggaaagc aaagacagtt tttattcccg aaggtcctag tgttcctaat      1020
     accactataa atggtatggc accaacggtg cgcatagatg ccggttctcc aaagggtctt      1080
     ggagttccga aagggtttac atacgaaagt tttattaaag atgaaatatt acctgatcat      1140
     tgatcggtaa tgggccgttt ttgtttttaa ttttcattca attacttcca tcatgagttc      1200
     ttcacaaaag aaagctggtg ggaaagctgg taaacctact aaacgttctc agaactatgc      1260
     tgccttacgc aaagctcaac tgccgaagcc tccggcgttg aaagtcccgg ttgtaaaacc      1320
     gacgaatact atactgccgc agacgggctg tgtgtggcaa agcctcggga cccctctgag      1380
     tctgagctct tttaatgggc tcggcgtgag attcctctac agttttctga aggatttcgc      1440
     gggacctcgg atcctcgaag aggatctgat ttacaggatg gtgttttcca taacaccgtc      1500
     ccatgccggc accttttgtc tcactgatga cgtgacgact gaggatagta gggccgttgc      1560
     gcatggtaat cccatgcaag aatttcctca aggcgcgttt cacgctaatg agaagttcgg      1620
     gtttgagttg gtcttcacag ctcctaccca tgcgggaatg caaaaccaaa atttcaagca      1680
     ttcctatgcc gtagcccttt gtctggactt cgatgcgcag cctgagggat ctaaaaatcc      1740
     ctcataccga ttcaacgaag tttgggtcga gagaaaggcg ttcccgcgag cagggcccct      1800
     ccgcagtttg attactgtgg ggctgttcga cgaagctgac gatcttgatc gtcattgatg      1860
     taccccatta atttgggatg ctaaagtcat ttaatgctga cctccactgg gtggattaag      1920
     gtcaaggtat gaagtcctat tcgctcctga taggatcgac ttcatattgc ttatatatgt      1980
     gctaacgcac atatataaat gctcatgcaa aactgcatga atgcccctaa gggatgc         2037
//